NO03G01510, NO03G01510 (gene) Nannochloropsis oceanica

Overview
NameNO03G01510
Unique NameNO03G01510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1535
Alignment locationchr3:457797..459331 -

Link to JBrowse

Properties
Property NameValue
DescriptionSpermidine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:457797..459331 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR030374PABS
IPR035246Spermidine_synt_N
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
BLAST of NO03G01510 vs. NCBI_GenBank
Match: EWM29611.1 (spermidine synthase [Nannochloropsis gaditana])

HSP 1 Score: 522.3 bits (1344), Expect = 1.000e-144
Identity = 255/318 (80.19%), Postives = 280/318 (88.05%), Query Frame = 0
Query:    1 MANDGSNKKVELLDLIKKGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQ-----------APLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            MA   S+ + ELL+LIK GWFEE QSFW+GQRFSLQVEKVLFHARS +QDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMI H+PLFAHPNPRKVLIIGGGDGGVLREVAKHPS++ IHMCEIDKMVIDVSKEFM DTLATSY+DPRLTLVVDDAAKFVT++GH TYDCI+VDSSDPVGPAEALFE AFF+SLH+ALNP GIICTQAECQWLHLDFI+KVY++CCDIF +VEYAYT+IPTYPSGQIGFMLL     +  A+             LR  ARTPS++VQA L+FYNPALHTAAFALPEFARRKL+EAR
Sbjct:    1 MAAGASDDRQELLNLIKDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_005855348.1 (spermidine synthase, partial [Nannochloropsis gaditana CCMP526] >EKU21023.1 spermidine synthase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 485.3 bits (1248), Expect = 1.400e-133
Identity = 237/290 (81.72%), Postives = 259/290 (89.31%), Query Frame = 0
Query:   29 SGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQ-----------APLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            +GQRFSLQVEKVLFHARS +QDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMI H+PLFAHPNPRKVLIIGGGDGGVLREVAKHPS++ IHMCEIDKMVIDVSKEFM DTLATSY+DPRLTLVVDDAAKFVT++GH TYDCI+VDSSDPVGPAEALFE AFF+SLH+ALNP GIICTQAECQWLHLDFI+KVY++CCDIF +VEYAYT+IPTYPSGQIGFMLL     +  A+             LR  ARTPS++VQA L+FYNPALHTAAFALPEFARRKL+EAR
Sbjct:    1 TGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 290          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: CCA19405.1 (unnamed protein product [Albugo laibachii Nc14])

HSP 1 Score: 360.1 bits (923), Expect = 6.700e-96
Identity = 169/292 (57.88%), Postives = 216/292 (73.97%), Query Frame = 0
Query:   18 KGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEARGG 310
            K WF ET++ W GQRF+LQ+EKVL+  +SDFQD+L+F+S++YG VLVLDG+IQATERDE AYQEMI H+PLFAH  P+ VLI+GGGDGGVLREV KH  VE I MCEID  V +VSK+F   +LA ++DD RL L+  DAAK++  E  E +D I+VDSSDPVGPA+ LF+  F++ +  AL+ +GIICTQ EC WLHLD I  V   C  IFP V+YAYT+IPTYPSGQIGF++ +N       +  LR P R P+ D++  LR+Y+P++H  AF LP FA R +E+ R G
Sbjct:    8 KEWFTETEALWPGQRFALQMEKVLYRGKSDFQDILVFESSTYGNVLVLDGIIQATERDEFAYQEMISHLPLFAHAEPKNVLIVGGGDGGVLREVVKHDCVERIVMCEIDPKVCEVSKQFFATSLAVAFDDRRLHLIHADAAKYLKDESSEKFDVIIVDSSDPVGPAQVLFQTKFYQDMRDALSTDGIICTQGECLWLHLDLIKTVMSECNAIFPTVQYAYTTIPTYPSGQIGFVICANE------KTDLRKPKRGPTPDMEKSLRYYSPSMHHGAFILPAFAERAIEQVRKG 293          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_012203044.1 (spermidine synthase [Saprolegnia parasitica CBS 223.65] >KDO26346.1 spermidine synthase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 359.8 bits (922), Expect = 8.700e-96
Identity = 174/288 (60.42%), Postives = 208/288 (72.22%), Query Frame = 0
Query:   20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            WF ET++ W GQ+F L  E+VLFH +SDFQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK+F  DTLAT+++DPRLTL+ DDAA F+       YD I+VDSSDPVGPAE LF   F+ ++  ALNPNGI+CTQ EC WLH+D IA V       FP V+YAYT+IPTYPSGQIGF+L     S  E+   L  P R         LR+YN  +H AAF LP FA +K+   R
Sbjct:    6 WFSETEAMWPGQKFCLAQEEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKFFADTLATTFNDPRLTLMHDDAAAFLRNGDCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGGFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALNKPKRIVDEKTAENLRYYNSKIHEAAFVLPSFAEKKIAPVR 289          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: CBJ29508.1 (spermidine/spermine synthase [Ectocarpus siliculosus])

HSP 1 Score: 359.4 bits (921), Expect = 1.100e-95
Identity = 172/292 (58.90%), Postives = 220/292 (75.34%), Query Frame = 0
Query:   16 IKKGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            IK GWF ET+  W GQ+FSL+V++VLFH RSDFQDVL+F S  YGKVLVLDGVIQ TERDE +YQEM+ H+P FA  +P+KVLI+GGGDGGVLRE+A+HP VE IHMCEID MV +VSK F   T A+++ D RL LV +DAA+FV KEG+  YD I+VDSSDPVGPAE LF+P+F++++ QAL P G+I TQ EC WLHL  I  V ++C +IF  V+YA+T++P+YPSGQIGF+L S        +  L TPA TP++ +   LR+Y+P +H AAF LP FA +++   R
Sbjct:    3 IKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGHPKKVLIVGGGDGGVLREIARHPGVETIHMCEIDSMVCEVSKRFEFCT-ASAFGDARLKLVHEDAAEFVKKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLAS------VEERDLSTPASTPNAAMTEVLRYYSPEVHQAAFVLPVFAEKEIAGVR 287          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_009516678.1 (hypothetical protein PHYSODRAFT_477587 [Phytophthora sojae] >EGZ29403.1 hypothetical protein PHYSODRAFT_477587 [Phytophthora sojae])

HSP 1 Score: 357.8 bits (917), Expect = 3.300e-95
Identity = 167/291 (57.39%), Postives = 215/291 (73.88%), Query Frame = 0
Query:   17 KKGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            +K WF ET++ W GQ+FSL++E+VLF  +SDFQDVL+F+S +YG VLVLDGVIQ TERDE AYQEMI H+P+FAH  P++VLI+GGGDGGVLREV KH  VE + MCEID MV DVSK+F  DT+AT++DDPR+TL+  DAA ++     + +D ++VDSSDPVGPAE L+   F+ S+  +L+P+G+ICTQ EC WLHLD I  V + C  +FP V Y+YT+IPTYPSGQIGF++ S   S G     L  P RTP + +Q  LR+Y+  +H AAF LP FA RK+   R
Sbjct:    4 EKQWFSETEAMWPGQKFSLEMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHACVEQVVMCEIDSMVCDVSKKFFKDTVATAFDDPRVTLLHADAAVYLRGNTADKFDVVIVDSSDPVGPAEVLYRAEFYESMKNSLSPDGVICTQGECLWLHLDLIVDVMQRCQGLFPTVNYSYTTIPTYPSGQIGFIMCSLDQSEG----VLAKPKRTPDAKMQESLRYYSAQIHEAAFVLPAFAERKIAAVR 290          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: POM71541.1 (Spermidine synthase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 357.8 bits (917), Expect = 3.300e-95
Identity = 167/288 (57.99%), Postives = 213/288 (73.96%), Query Frame = 0
Query:   20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            WF ET++ W GQ+FSL++E VLF  +SDFQDVL+F+S +YG VLVLDGVIQ TERDE AYQEMI H+P+FAH  P++VLI+GGGDGGVLREV KH  VE I MCEID MV DVSK+F  DTLAT++DDPR+TL+  DAA ++ +     +D ++VDSSDPVGPAE L+   F+ S+  +L+P+G+ICTQ EC WLHLD I  V + C ++FP V Y+YT+IPTYPSGQIGF++ S   + G     L  P RTP + +   LR+Y+P +H AAF LP FA RK+   R
Sbjct:    8 WFSETEAMWPGQKFSLKIEDVLFKGKSDFQDVLVFKSATYGNVLVLDGVIQVTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVEEIVMCEIDSMVCDVSKKFFKDTLATAFDDPRVTLLHADAAVYLRENTTNKFDVVIVDSSDPVGPAEVLYRAEFYESMKNSLSPDGVICTQGECLWLHLDLIVDVMQRCQNLFPTVNYSYTTIPTYPSGQIGFIMCSLDQTEG----GLAKPKRTPDAKMTETLRYYSPNIHEAAFVLPAFAERKIATVR 291          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_008609164.1 (spermidine synthase [Saprolegnia diclina VS20] >XP_008609165.1 spermidine synthase, variant [Saprolegnia diclina VS20] >EQC37644.1 spermidine synthase [Saprolegnia diclina VS20] >EQC37645.1 spermidine synthase, variant [Saprolegnia diclina VS20])

HSP 1 Score: 357.5 bits (916), Expect = 4.300e-95
Identity = 172/288 (59.72%), Postives = 209/288 (72.57%), Query Frame = 0
Query:   20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            WF ET++ W GQ+F L  E+VLFH +SDFQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK+F  ++LAT+++DPRLTL+ DDAA ++       YD I+VDSSDPVGPAE LF   F+ ++  ALNPNGI+CTQ EC WLH+D IA V       FP V+YAYT+IPTYPSGQIGF+L     S  E+   L  P R       A LR+YN  +H AAF LP FA +K+   R
Sbjct:   34 WFSETEAMWPGQKFCLAQEEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKQFFANSLATTFNDPRLTLMHDDAAAYLRNGQCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGQFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALNKPKRIVDEKTAANLRYYNSKIHEAAFVLPSFAEKKIAPVR 317          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: OQS06162.1 (spermidine synthase [Thraustotheca clavata])

HSP 1 Score: 356.7 bits (914), Expect = 7.400e-95
Identity = 172/288 (59.72%), Postives = 209/288 (72.57%), Query Frame = 0
Query:   20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            WF ET++ W GQ+F L  E+VLFH +S+FQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK+F  +TLAT+++DPRLTL+ DDAA ++       YD I+VDSSDPVGPAE LF   F+ ++  ALNPNGI+CTQ EC WLHLD IA V       FP V+YAYT+IPTYPSGQIGF+L     S  E+   L  P R   +     LR+YN  +H AAF LP FA +K+   R
Sbjct:   25 WFSETEAMWPGQKFCLAQEEVLFHGKSNFQDVLVFKSQTYGNVLVLDGVIQCTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKQFFANTLATTFNDPRLTLMHDDAAAYLRNGNCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHLDLIADVLGRVGKFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALNKPKRVVDAKTAENLRYYNSKIHEAAFILPSFAEKKIAPVR 308          
BLAST of NO03G01510 vs. NCBI_GenBank
Match: OQR86998.1 (spermidine synthase [Achlya hypogyna])

HSP 1 Score: 355.9 bits (912), Expect = 1.300e-94
Identity = 171/288 (59.38%), Postives = 211/288 (73.26%), Query Frame = 0
Query:   20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308
            WF ET++ W GQ+F L  E+VL+H +SDFQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK++  ++LAT+++DPRLTL+ DDAA ++       YD I+VDSSDPVGPAE LF   F+ ++ +ALNPNGI+CTQ EC WLHLD IA V       FP V+YAYT+IPTYPSGQIGF+L     S  E+   L  P RT       +LR+YN  +H AAF LP FA +K+   R
Sbjct:   35 WFSETEAMWPGQKFCLAQEEVLYHGKSDFQDVLVFKSQTYGNVLVLDGVIQCTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKYFANSLATTFNDPRLTLMHDDAAAYLRNGQCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKKALNPNGIVCTQGECLWLHLDLIADVLGRVGQFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALSKPKRTVDPKTAEELRYYNSKIHEAAFVLPSFAEKKIAPVR 318          
The following BLAST results are available for this feature:
BLAST of NO03G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29611.11.000e-14480.19spermidine synthase [Nannochloropsis gaditana][more]
XP_005855348.11.400e-13381.72spermidine synthase, partial [Nannochloropsis gadi... [more]
CCA19405.16.700e-9657.88unnamed protein product [Albugo laibachii Nc14][more]
XP_012203044.18.700e-9660.42spermidine synthase [Saprolegnia parasitica CBS 22... [more]
CBJ29508.11.100e-9558.90spermidine/spermine synthase [Ectocarpus siliculos... [more]
XP_009516678.13.300e-9557.39hypothetical protein PHYSODRAFT_477587 [Phytophtho... [more]
POM71541.13.300e-9557.99Spermidine synthase [Phytophthora palmivora var. p... [more]
XP_008609164.14.300e-9559.72spermidine synthase [Saprolegnia diclina VS20] >XP... [more]
OQS06162.17.400e-9559.72spermidine synthase [Thraustotheca clavata][more]
OQR86998.11.300e-9459.38spermidine synthase [Achlya hypogyna][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005751NSK005751Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01510.1NO03G01510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571753gene_1329Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100006g94gene1033Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01510.1NO03G01510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01510 ID=NO03G01510|Name=NO03G01510|organism=Nannochloropsis oceanica|type=gene|length=1535bp
AGACAAGCATGGCGAACGACGGCAGCAACAAAAAGGTGGAGCTTCTGGAC
CTGATCAAGAAAGGCTGGTTCGAAGAGACGCAGAGCTTTTGGTCAGgtaa
gtgtccgtctatatgtctctttgcccctcccctccgttatcctcttatca
acaagtccagtacaaaagagtgatgcttgaaaaactcgtgtcgattttca
atttttcacccactccttccggttatttaacttgacagGCCAACGCTTTT
CCCTTCAAGTGGAAAAGGTCCTCTTCCATGCCCGTTCCGACTTCCAAGAC
GTCCTCCTCTTCCAGTCAACTTCCTACGGCAAAGTTCTCGTCCTAGATGG
AGTGATTCAAGCGACGGAGCGCGATGAAATGGCCTACCAAGAAATGATTG
TTCATATGCCTCTGTTCGCCCACCCGAACCCGCGCAAGGTCCTGATAATC
GGCGGCGGAGACGGAGGCGTGTTGAGGGAAGTGGCGAAGCATCCGTCGGT
AGAGGTAATTCACATGTGCGAAATTGACAAGATGGTCATTGACGTGAGCA
AAGAGTTTATGGGCGACACCCTGGCGACGTCCTATGACGACCCGCGATTG
ACACTGgtaagtgcgtgggtgaagaggaagggacggagggagagacagac
ggagggatgggaagaggggaaggagtcctgcgcaggacacttacttcaat
ggaacgtctgcattttgaaaagtacgcacttgttgagagacacacattct
ctctcgctttcatgttcgatagGTGGTGGATGATGCAGCTAAATTTGTGA
CGAAGGAAGGCCATGAAACGTATGACTGTATCGTCGTCGACTCCTCCGAT
CCAGTGGgtacgtacggaacgtcaaaaaggacccttattcatctctcgtt
tcaatcacaagccaaactgctaactagccttcattttgaaatcaaattta
cagGCCCCGCCGAGGCTTTGTTCGAGCCCGCCTTCTTCCGTTCCCTCCAT
CAAGCCCTCAACCCCAACGGGATCATCTGCACACAGGCCGAATGCCAATG
GCTGCACCTGGATTTCATCGCCAAGGTCTACAAATCCTGCTGCGACATTT
TCCCCCAAGTTGAATATGCTTATACATCCATCCCTACTTACCCCTCGGGG
CAAATTGGCTTCATGCTCTTGTCCAACAGCACCAGCAGCGGAGAAGCTCA
GGCACCTTTGCGGACCCCGGCCCGTACGCCCTCGTCGGACGTACAAGCGA
AGCTGAGGTTTTACAATCCGGCCTTACACACAGCTGCATTTGCCTTGCCC
GAATTTGCCCGGCGCAAATTGGAGGAGGCCCGGGGGGGGAAGTAAAAAAG
AGGGGATCGGGCAGAGGGGAGGTTGTAAGAGGGCCTCAGGCTTAGGGTTG
CGCGCTGCATGTACGCATGGATTGACTCATGAAATGGAAACAAGACAAAG
AAAAGATAATACTGACATGAAACGTCAAGCTCTAGGAGGATGCATGGCTT
GTGTGTCGAAGCGTAAAAAAAAGGAGCATGGGCCC
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protein sequence of NO03G01510.1

>NO03G01510.1-protein ID=NO03G01510.1-protein|Name=NO03G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MANDGSNKKVELLDLIKKGWFEETQSFWSGQRFSLQVEKVLFHARSDFQD
VLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLII
GGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRL
TLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALN
PNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGF
MLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFAR
RKLEEARGGK*
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Synonyms
Publications