NO03G01510, NO03G01510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01510 vs. NCBI_GenBank
Match: EWM29611.1 (spermidine synthase [Nannochloropsis gaditana]) HSP 1 Score: 522.3 bits (1344), Expect = 1.000e-144 Identity = 255/318 (80.19%), Postives = 280/318 (88.05%), Query Frame = 0 Query: 1 MANDGSNKKVELLDLIKKGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQ-----------APLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 MA S+ + ELL+LIK GWFEE QSFW+GQRFSLQVEKVLFHARS +QDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMI H+PLFAHPNPRKVLIIGGGDGGVLREVAKHPS++ IHMCEIDKMVIDVSKEFM DTLATSY+DPRLTLVVDDAAKFVT++GH TYDCI+VDSSDPVGPAEALFE AFF+SLH+ALNP GIICTQAECQWLHLDFI+KVY++CCDIF +VEYAYT+IPTYPSGQIGFMLL + A+ LR ARTPS++VQA L+FYNPALHTAAFALPEFARRKL+EAR Sbjct: 1 MAAGASDDRQELLNLIKDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_005855348.1 (spermidine synthase, partial [Nannochloropsis gaditana CCMP526] >EKU21023.1 spermidine synthase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 485.3 bits (1248), Expect = 1.400e-133 Identity = 237/290 (81.72%), Postives = 259/290 (89.31%), Query Frame = 0 Query: 29 SGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQ-----------APLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 +GQRFSLQVEKVLFHARS +QDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMI H+PLFAHPNPRKVLIIGGGDGGVLREVAKHPS++ IHMCEIDKMVIDVSKEFM DTLATSY+DPRLTLVVDDAAKFVT++GH TYDCI+VDSSDPVGPAEALFE AFF+SLH+ALNP GIICTQAECQWLHLDFI+KVY++CCDIF +VEYAYT+IPTYPSGQIGFMLL + A+ LR ARTPS++VQA L+FYNPALHTAAFALPEFARRKL+EAR Sbjct: 1 TGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 290
BLAST of NO03G01510 vs. NCBI_GenBank
Match: CCA19405.1 (unnamed protein product [Albugo laibachii Nc14]) HSP 1 Score: 360.1 bits (923), Expect = 6.700e-96 Identity = 169/292 (57.88%), Postives = 216/292 (73.97%), Query Frame = 0 Query: 18 KGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEARGG 310 K WF ET++ W GQRF+LQ+EKVL+ +SDFQD+L+F+S++YG VLVLDG+IQATERDE AYQEMI H+PLFAH P+ VLI+GGGDGGVLREV KH VE I MCEID V +VSK+F +LA ++DD RL L+ DAAK++ E E +D I+VDSSDPVGPA+ LF+ F++ + AL+ +GIICTQ EC WLHLD I V C IFP V+YAYT+IPTYPSGQIGF++ +N + LR P R P+ D++ LR+Y+P++H AF LP FA R +E+ R G Sbjct: 8 KEWFTETEALWPGQRFALQMEKVLYRGKSDFQDILVFESSTYGNVLVLDGIIQATERDEFAYQEMISHLPLFAHAEPKNVLIVGGGDGGVLREVVKHDCVERIVMCEIDPKVCEVSKQFFATSLAVAFDDRRLHLIHADAAKYLKDESSEKFDVIIVDSSDPVGPAQVLFQTKFYQDMRDALSTDGIICTQGECLWLHLDLIKTVMSECNAIFPTVQYAYTTIPTYPSGQIGFVICANE------KTDLRKPKRGPTPDMEKSLRYYSPSMHHGAFILPAFAERAIEQVRKG 293
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_012203044.1 (spermidine synthase [Saprolegnia parasitica CBS 223.65] >KDO26346.1 spermidine synthase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 359.8 bits (922), Expect = 8.700e-96 Identity = 174/288 (60.42%), Postives = 208/288 (72.22%), Query Frame = 0 Query: 20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 WF ET++ W GQ+F L E+VLFH +SDFQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK+F DTLAT+++DPRLTL+ DDAA F+ YD I+VDSSDPVGPAE LF F+ ++ ALNPNGI+CTQ EC WLH+D IA V FP V+YAYT+IPTYPSGQIGF+L S E+ L P R LR+YN +H AAF LP FA +K+ R Sbjct: 6 WFSETEAMWPGQKFCLAQEEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKFFADTLATTFNDPRLTLMHDDAAAFLRNGDCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGGFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALNKPKRIVDEKTAENLRYYNSKIHEAAFVLPSFAEKKIAPVR 289
BLAST of NO03G01510 vs. NCBI_GenBank
Match: CBJ29508.1 (spermidine/spermine synthase [Ectocarpus siliculosus]) HSP 1 Score: 359.4 bits (921), Expect = 1.100e-95 Identity = 172/292 (58.90%), Postives = 220/292 (75.34%), Query Frame = 0 Query: 16 IKKGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 IK GWF ET+ W GQ+FSL+V++VLFH RSDFQDVL+F S YGKVLVLDGVIQ TERDE +YQEM+ H+P FA +P+KVLI+GGGDGGVLRE+A+HP VE IHMCEID MV +VSK F T A+++ D RL LV +DAA+FV KEG+ YD I+VDSSDPVGPAE LF+P+F++++ QAL P G+I TQ EC WLHL I V ++C +IF V+YA+T++P+YPSGQIGF+L S + L TPA TP++ + LR+Y+P +H AAF LP FA +++ R Sbjct: 3 IKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGHPKKVLIVGGGDGGVLREIARHPGVETIHMCEIDSMVCEVSKRFEFCT-ASAFGDARLKLVHEDAAEFVKKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLAS------VEERDLSTPASTPNAAMTEVLRYYSPEVHQAAFVLPVFAEKEIAGVR 287
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_009516678.1 (hypothetical protein PHYSODRAFT_477587 [Phytophthora sojae] >EGZ29403.1 hypothetical protein PHYSODRAFT_477587 [Phytophthora sojae]) HSP 1 Score: 357.8 bits (917), Expect = 3.300e-95 Identity = 167/291 (57.39%), Postives = 215/291 (73.88%), Query Frame = 0 Query: 17 KKGWFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 +K WF ET++ W GQ+FSL++E+VLF +SDFQDVL+F+S +YG VLVLDGVIQ TERDE AYQEMI H+P+FAH P++VLI+GGGDGGVLREV KH VE + MCEID MV DVSK+F DT+AT++DDPR+TL+ DAA ++ + +D ++VDSSDPVGPAE L+ F+ S+ +L+P+G+ICTQ EC WLHLD I V + C +FP V Y+YT+IPTYPSGQIGF++ S S G L P RTP + +Q LR+Y+ +H AAF LP FA RK+ R Sbjct: 4 EKQWFSETEAMWPGQKFSLEMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHACVEQVVMCEIDSMVCDVSKKFFKDTVATAFDDPRVTLLHADAAVYLRGNTADKFDVVIVDSSDPVGPAEVLYRAEFYESMKNSLSPDGVICTQGECLWLHLDLIVDVMQRCQGLFPTVNYSYTTIPTYPSGQIGFIMCSLDQSEG----VLAKPKRTPDAKMQESLRYYSAQIHEAAFVLPAFAERKIAAVR 290
BLAST of NO03G01510 vs. NCBI_GenBank
Match: POM71541.1 (Spermidine synthase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 357.8 bits (917), Expect = 3.300e-95 Identity = 167/288 (57.99%), Postives = 213/288 (73.96%), Query Frame = 0 Query: 20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 WF ET++ W GQ+FSL++E VLF +SDFQDVL+F+S +YG VLVLDGVIQ TERDE AYQEMI H+P+FAH P++VLI+GGGDGGVLREV KH VE I MCEID MV DVSK+F DTLAT++DDPR+TL+ DAA ++ + +D ++VDSSDPVGPAE L+ F+ S+ +L+P+G+ICTQ EC WLHLD I V + C ++FP V Y+YT+IPTYPSGQIGF++ S + G L P RTP + + LR+Y+P +H AAF LP FA RK+ R Sbjct: 8 WFSETEAMWPGQKFSLKIEDVLFKGKSDFQDVLVFKSATYGNVLVLDGVIQVTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVEEIVMCEIDSMVCDVSKKFFKDTLATAFDDPRVTLLHADAAVYLRENTTNKFDVVIVDSSDPVGPAEVLYRAEFYESMKNSLSPDGVICTQGECLWLHLDLIVDVMQRCQNLFPTVNYSYTTIPTYPSGQIGFIMCSLDQTEG----GLAKPKRTPDAKMTETLRYYSPNIHEAAFVLPAFAERKIATVR 291
BLAST of NO03G01510 vs. NCBI_GenBank
Match: XP_008609164.1 (spermidine synthase [Saprolegnia diclina VS20] >XP_008609165.1 spermidine synthase, variant [Saprolegnia diclina VS20] >EQC37644.1 spermidine synthase [Saprolegnia diclina VS20] >EQC37645.1 spermidine synthase, variant [Saprolegnia diclina VS20]) HSP 1 Score: 357.5 bits (916), Expect = 4.300e-95 Identity = 172/288 (59.72%), Postives = 209/288 (72.57%), Query Frame = 0 Query: 20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 WF ET++ W GQ+F L E+VLFH +SDFQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK+F ++LAT+++DPRLTL+ DDAA ++ YD I+VDSSDPVGPAE LF F+ ++ ALNPNGI+CTQ EC WLH+D IA V FP V+YAYT+IPTYPSGQIGF+L S E+ L P R A LR+YN +H AAF LP FA +K+ R Sbjct: 34 WFSETEAMWPGQKFCLAQEEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKQFFANSLATTFNDPRLTLMHDDAAAYLRNGQCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGQFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALNKPKRIVDEKTAANLRYYNSKIHEAAFVLPSFAEKKIAPVR 317
BLAST of NO03G01510 vs. NCBI_GenBank
Match: OQS06162.1 (spermidine synthase [Thraustotheca clavata]) HSP 1 Score: 356.7 bits (914), Expect = 7.400e-95 Identity = 172/288 (59.72%), Postives = 209/288 (72.57%), Query Frame = 0 Query: 20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 WF ET++ W GQ+F L E+VLFH +S+FQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK+F +TLAT+++DPRLTL+ DDAA ++ YD I+VDSSDPVGPAE LF F+ ++ ALNPNGI+CTQ EC WLHLD IA V FP V+YAYT+IPTYPSGQIGF+L S E+ L P R + LR+YN +H AAF LP FA +K+ R Sbjct: 25 WFSETEAMWPGQKFCLAQEEVLFHGKSNFQDVLVFKSQTYGNVLVLDGVIQCTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKQFFANTLATTFNDPRLTLMHDDAAAYLRNGNCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHLDLIADVLGRVGKFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALNKPKRVVDAKTAENLRYYNSKIHEAAFILPSFAEKKIAPVR 308
BLAST of NO03G01510 vs. NCBI_GenBank
Match: OQR86998.1 (spermidine synthase [Achlya hypogyna]) HSP 1 Score: 355.9 bits (912), Expect = 1.300e-94 Identity = 171/288 (59.38%), Postives = 211/288 (73.26%), Query Frame = 0 Query: 20 WFEETQSFWSGQRFSLQVEKVLFHARSDFQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMIVHMPLFAHPNPRKVLIIGGGDGGVLREVAKHPSVEVIHMCEIDKMVIDVSKEFMGDTLATSYDDPRLTLVVDDAAKFVTKEGHETYDCIVVDSSDPVGPAEALFEPAFFRSLHQALNPNGIICTQAECQWLHLDFIAKVYKSCCDIFPQVEYAYTSIPTYPSGQIGFMLLSNSTSSGEAQAPLRTPARTPSSDVQAKLRFYNPALHTAAFALPEFARRKLEEAR 308 WF ET++ W GQ+F L E+VL+H +SDFQDVL+F+S +YG VLVLDGVIQ TERDE +YQEMI H+PL++H NP+ VLI+GGGDGGVLREVAKHPSVE I MCEID MV DVSK++ ++LAT+++DPRLTL+ DDAA ++ YD I+VDSSDPVGPAE LF F+ ++ +ALNPNGI+CTQ EC WLHLD IA V FP V+YAYT+IPTYPSGQIGF+L S E+ L P RT +LR+YN +H AAF LP FA +K+ R Sbjct: 35 WFSETEAMWPGQKFCLAQEEVLYHGKSDFQDVLVFKSQTYGNVLVLDGVIQCTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKYFANSLATTFNDPRLTLMHDDAAAYLRNGQCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKKALNPNGIVCTQGECLWLHLDLIADVLGRVGQFFPTVQYAYTTIPTYPSGQIGFVL----CSLDESPNALSKPKRTVDPKTAEELRYYNSKIHEAAFVLPSFAEKKIAPVR 318 The following BLAST results are available for this feature:
BLAST of NO03G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01510 ID=NO03G01510|Name=NO03G01510|organism=Nannochloropsis oceanica|type=gene|length=1535bpback to top protein sequence of NO03G01510.1 >NO03G01510.1-protein ID=NO03G01510.1-protein|Name=NO03G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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