NO03G01380, NO03G01380 (gene) Nannochloropsis oceanica

Overview
NameNO03G01380
Unique NameNO03G01380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length513
Alignment locationchr3:427831..428343 +

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Properties
Property NameValue
DescriptionAdrenodoxin-like protein 2, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:427831..428343 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0009055electron transfer activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0010412Fe-2S_ferredoxin-type
IPR001055Adrenodoxin
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Homology
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_005853990.1 (hypothetical protein NGA_2031600, partial [Nannochloropsis gaditana CCMP526] >EKU22369.1 hypothetical protein NGA_2031600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 265.8 bits (678), Expect = 9.400e-68
Identity = 124/146 (84.93%), Postives = 136/146 (93.15%), Query Frame = 0 
Query:   25 ALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            AL + PR++ FH T  VAHGSGKDL +APRI LHWIGKKGEEF+TDGIVGESIL+AAHRHEVELEGACEGVCACSTCHVILE+PVFE LEDPSEEEEDMLDQAFGLTPTSRLGCQVEL+Q +DG++IKLP+ATRNFYIDGHVPKPH
Sbjct:   28 ALIQIPRIL-FHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 172
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: EWM29515.1 (adrenodoxin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 265.8 bits (678), Expect = 9.400e-68
Identity = 124/146 (84.93%), Postives = 136/146 (93.15%), Query Frame = 0 
Query:   25 ALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            AL + PR++ FH T  VAHGSGKDL +APRI LHWIGKKGEEF+TDGIVGESIL+AAHRHEVELEGACEGVCACSTCHVILE+PVFE LEDPSEEEEDMLDQAFGLTPTSRLGCQVEL+Q +DG++IKLP+ATRNFYIDGHVPKPH
Sbjct:   38 ALIQIPRIL-FHATARVAHGSGKDLKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMDGLKIKLPSATRNFYIDGHVPKPH 182
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: GAX22957.1 (hypothetical protein FisN_15Hh148 [Fistulifera solaris])

HSP 1 Score: 166.8 bits (421), Expect = 6.000e-38
Identity = 75/128 (58.59%), Postives = 94/128 (73.44%), Query Frame = 0 
Query:   43 HGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            HG  K  NDAP IT+ ++            VGES+L  AHR+E++LEGACEGVCACSTCH+I+   +++ L DPSE+EEDMLD AFGLT TSRLGCQV +T+ ++G   K+P ATRNFY+DGH PKPH
Sbjct:   26 HGGPKVPNDAPTITVTFLQPDKTRKEVQARVGESLLQTAHRNEIDLEGACEGVCACSTCHLIMPQDLYDILPDPSEDEEDMLDMAFGLTDTSRLGCQVIVTKDMEGTEFKMPAATRNFYVDGHKPKPH 153
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_008878989.1 (hypothetical protein H310_13315 [Aphanomyces invadans] >ETV92438.1 hypothetical protein H310_13315 [Aphanomyces invadans])

HSP 1 Score: 163.7 bits (413), Expect = 5.000e-37
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 0 
Query:   35 FHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            FH T+ + HG      + P + L +  K G     D  +G SILD AH+++++LEGACE   ACSTCHVI+ED +F+KL +P EEEEDMLD AFGLT TSRLGCQV +++ ++   I LP ATRNFY+DGHVPKPH
Sbjct:   23 FHATSLLQHGGSHVAANGPTVPLKFRLKDGSIKVVDAAIGASILDVAHKYDIDLEGACESSLACSTCHVIIEDDLFDKLPEPCEEEEDMLDLAFGLTATSRLGCQVMVSKDMENSVITLPLATRNFYVDGHVPKPH 158
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: KXN71099.1 (ferredoxin precursor [Conidiobolus coronatus NRRL 28638])

HSP 1 Score: 162.5 bits (410), Expect = 1.100e-36
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 0 
Query:   35 FHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            F  T    HGSGK   +   IT+++I  +GE  S  G VG+SILD AH +E++LEGACE   ACSTCHVIL D +F+ LE+P++EE DMLD AFGLT TSRLGCQVEL + ++G+ +K+P+ATRN  +DG  PKPH
Sbjct:   40 FSTTNISLHGSGKP-PEGEGITINFITPEGETVSARGRVGQSILDVAHSNEIDLEGACEASLACSTCHVILTDEIFDSLEEPTDEENDMLDLAFGLTETSRLGCQVELREDMEGMTVKIPSATRNMAVDGFKPKPH 174
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_009833927.1 (hypothetical protein H257_09416 [Aphanomyces astaci] >ETV76382.1 hypothetical protein H257_09416 [Aphanomyces astaci])

HSP 1 Score: 161.0 bits (406), Expect = 3.300e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 0 
Query:   35 FHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            FH T ++ HG     N  P + L +  K G     D  +G SILD AH+++++LEGACE   ACSTCHVI+E+ +F+KL +PSEEEEDMLD AFGLT TSRLGCQV ++  ++   + LP ATRNFY+DGHVPKPH
Sbjct:   24 FHATPSLQHGGAAAAN-GPTVPLKFRLKDGSIKVVDAQIGTSILDVAHKYDIDLEGACESSLACSTCHVIIEEDLFDKLPEPSEEEEDMLDLAFGLTATSRLGCQVMVSPEMENSVVTLPLATRNFYVDGHVPKPH 158
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: ETP53013.1 (hypothetical protein F442_02049 [Phytophthora parasitica P10297])

HSP 1 Score: 159.8 bits (403), Expect = 7.300e-36
Identity = 82/163 (50.31%), Postives = 104/163 (63.80%), Query Frame = 0 
Query:    8 RVAGTAITKTTTAAAASALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            RV G  +   T AA A      PR  +FH + A  HG      + P + + +  +       +   G SILD AH ++++LEGACE   ACSTCHVILEDPVF++LE+  E+EEDMLD AFGLT TSRLGCQV +T+  +G  + LP ATRNFY+DGHVPKPH
Sbjct:    3 RVFGQRLLSRTGAANA------PR--FFHASAAALHGDMSKFANNPAVHIKFKLRDDSIKEVEAKTGMSILDVAHANDIDLEGACESSMACSTCHVILEDPVFDELEEACEDEEDMLDMAFGLTDTSRLGCQVFVTEDFEGTTVSLPKATRNFYVDGHVPKPH 157
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: GAY02536.1 (Hypothetical protein PINS_010366 [Pythium insidiosum])

HSP 1 Score: 158.7 bits (400), Expect = 1.600e-35
Identity = 86/172 (50.00%), Postives = 107/172 (62.21%), Query Frame = 0 
Query:    4 AKIRRVAGT--AITKTTTAAAASALTRK--PRLV-YFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            A+  R   T  A+T  T  A   AL R   PR +  FH +  VAHG      + P + L ++   G     D   G SIL  AH ++++LEGACE   ACSTCHVILED VF++LE   E+EEDMLD AFGLT TSRLGCQV + + ++G  I +P ATRNFY+DGHVPKPH
Sbjct: 1663 AEANRTTATMNALTTLTLRATKRALPRASLPRAMRSFHASAVVAHGDLSKFANNPTVHLKFLKPDGSIVEVDAKKGMSILQVAHANDIDLEGACESSMACSTCHVILEDDVFDELEPACEDEEDMLDMAFGLTHTSRLGCQVFVDESMEGTTITMPKATRNFYVDGHVPKPH 1834
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_009524515.1 (hypothetical protein PHYSODRAFT_494192 [Phytophthora sojae] >EGZ21798.1 hypothetical protein PHYSODRAFT_494192 [Phytophthora sojae])

HSP 1 Score: 158.3 bits (399), Expect = 2.100e-35
Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 0 
Query:   22 AASALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            A +A  R PRL  FH +    HG        P + L +  +       +   G SILD AH ++++LEGACE   ACSTCHVILEDPVF++LE+  E+EEDMLD AFGLT TSRLGCQV + +  +G  + LP ATRNFY+DGHVPKPH
Sbjct:   12 ARAACGRAPRL--FHASATALHGDMSKFAANPTVHLKFRLRDDSIKEVEAKTGMSILDVAHANDIDLEGACESSMACSTCHVILEDPVFDELEEACEDEEDMLDMAFGLTHTSRLGCQVFVDEGFEGTTVTLPKATRNFYVDGHVPKPH 158
[Close]
BLAST of NO03G01380 vs. NCBI_GenBank
Match: XP_008915771.1 (hypothetical protein PPTG_19171 [Phytophthora parasitica INRA-310] >ETI55228.1 hypothetical protein F443_02096 [Phytophthora parasitica P1569] >ETK95047.1 hypothetical protein L915_02010 [Phytophthora parasitica] >ETL48440.1 hypothetical protein L916_01966 [Phytophthora parasitica] >ETM98962.1 hypothetical protein PPTG_19171 [Phytophthora parasitica INRA-310] >ETO83954.1 hypothetical protein F444_02109 [Phytophthora parasitica P1976] >ETP25025.1 hypothetical protein F441_02074 [Phytophthora parasitica CJ01A1] >KUF64800.1 2Fe-2S ferredoxin [Phytophthora nicotianae] >KUF93042.1 hypothetical protein AM588_10009053 [Phytophthora nicotianae])

HSP 1 Score: 157.9 bits (398), Expect = 2.800e-35
Identity = 81/163 (49.69%), Postives = 103/163 (63.19%), Query Frame = 0 
Query:    8 RVAGTAITKTTTAAAASALTRKPRLVYFHGTTAVAHGSGKDLNDAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACSTCHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIRIKLPTATRNFYIDGHVPKPH 171
            RV G  +   T  A A      PR  +FH + A  HG      + P + + +  +       +   G SILD AH ++++LEGACE   ACSTCHVILEDPVF++LE+  E+EEDMLD AFGLT TSRLGCQV +T+  +G  + LP ATRNFY+DGHVPKPH
Sbjct:    3 RVFGQRLLSRTGPANA------PR--FFHASAAALHGDMSKFANNPTVHIKFKLRDDSIKEVEAKTGMSILDVAHANDIDLEGACESSMACSTCHVILEDPVFDELEEACEDEEDMLDMAFGLTDTSRLGCQVFVTEDFEGTTVSLPKATRNFYVDGHVPKPH 157
The following BLAST results are available for this feature:
BLAST of NO03G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853990.19.400e-6884.93hypothetical protein NGA_2031600, partial [Nannoch... [more]
EWM29515.19.400e-6884.93adrenodoxin-like protein [Nannochloropsis gaditana... [more]
GAX22957.16.000e-3858.59hypothetical protein FisN_15Hh148 [Fistulifera sol... [more]
XP_008878989.15.000e-3755.15hypothetical protein H310_13315 [Aphanomyces invad... [more]
KXN71099.11.100e-3656.62ferredoxin precursor [Conidiobolus coronatus NRRL ... [more]
XP_009833927.13.300e-3655.15hypothetical protein H257_09416 [Aphanomyces astac... [more]
ETP53013.17.300e-3650.31hypothetical protein F442_02049 [Phytophthora para... [more]
GAY02536.11.600e-3550.00Hypothetical protein PINS_010366 [Pythium insidios... [more]
XP_009524515.12.100e-3552.35hypothetical protein PHYSODRAFT_494192 [Phytophtho... [more]
XP_008915771.12.800e-3549.69hypothetical protein PPTG_19171 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005770NSK005770Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01380.1NO03G01380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571708gene_1316Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100006g77gene1050Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01380.1NO03G01380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01380 ID=NO03G01380|Name=NO03G01380|organism=Nannochloropsis oceanica|type=gene|length=513bp
ATGCTCGCAGCTAAAATCCGCCGGGTGGCTGGGACCGCTATCACCAAAAC
TACTACCGCCGCAGCAGCAAGCGCTTTAACAAGAAAACCACGATTAGTAT
ACTTCCATGGTACCACGGCTGTGGCGCACGGCAGTGGCAAGGATCTGAAT
GACGCGCCGCGCATTACATTGCATTGGATCGGCAAGAAAGGGGAGGAGTT
CAGCACGGACGGGATCGTGGGCGAAAGCATCCTGGACGCGGCGCACCGGC
ATGAAGTGGAGTTGGAAGGGGCGTGCGAAGGTGTGTGTGCATGTTCAACA
TGCCACGTAATTTTGGAAGACCCTGTATTTGAGAAGCTGGAAGACCCATC
GGAGGAGGAAGAGGATATGCTAGATCAGGCGTTTGGGCTCACTCCTACGT
CGCGGCTAGGGTGTCAGGTGGAATTGACTCAAGTCCTGGATGGCATAAGG
ATTAAACTACCAACTGCGACGCGTAATTTCTATATTGATGGGCATGTGCC
GAAGCCACATTAG
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protein sequence of NO03G01380.1

>NO03G01380.1-protein ID=NO03G01380.1-protein|Name=NO03G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=171bp
MLAAKIRRVAGTAITKTTTAAAASALTRKPRLVYFHGTTAVAHGSGKDLN
DAPRITLHWIGKKGEEFSTDGIVGESILDAAHRHEVELEGACEGVCACST
CHVILEDPVFEKLEDPSEEEEDMLDQAFGLTPTSRLGCQVELTQVLDGIR
IKLPTATRNFYIDGHVPKPH*
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Synonyms
Publications