NO03G01360, NO03G01360 (gene) Nannochloropsis oceanica

Overview
NameNO03G01360
Unique NameNO03G01360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1131
Alignment locationchr3:421870..423000 -

Link to JBrowse

Properties
Property NameValue
Description3-methyl-2-oxobutanoate hydroxymethyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:421870..423000 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038643-methyl-2-oxobutanoate hydroxymethyltransferase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015813Pyrv/PenolPyrv_Kinase-like_dom
IPR003700Pantoate_hydroxy_MeTrfase
Homology
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: EWM29560.1 (3-methyl-2-oxobutanoate hydroxymethyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 586.6 bits (1511), Expect = 5.300e-164
Identity = 306/363 (84.30%), Postives = 326/363 (89.81%), Query Frame = 0 
Query:   14 RIPRSTPALPTVHFNRSFAAAAPSSDSVPPAGSPRASARSPLDGGNASMKKMSVLDLLHKKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDAAVRKAQAEEAAERLKQSDEYEQIKLY 377
            R+ R    L +   +RSF AA+P ++S+ PAG PRASAR PL GGNAS KKMSVLDLLHKKRK+Q ISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGY TTQPVDMEQMLHHCKAVARG KRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRA+IV+KIVK GIAVMGH+GLTPQAISVLGGFRAQGRTAVKAR LVDDALALQ+AGAFAVV+ECVP PVAQAIT ALEIPTIGIGAGPHT GQVLV+HDMLGMT+HPHHEAFVPRFCKRYAQLG+ IR GLE+FK+DVE GTFPSEAYSPYKMP  EL AF  LMA+DA  R+ QA  AAERLKQSDEYEQIKLY
Sbjct:   13 RLSRPKNRLHSYQCSRSF-AASPPAESLAPAGGPRASARPPL-GGNASSKKMSVLDLLHKKRKNQRISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYDTTQPVDMEQMLHHCKAVARGTKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRAHIVEKIVKNGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARGLVDDALALQEAGAFAVVVECVPAPVAQAITEALEIPTIGIGAGPHTCGQVLVFHDMLGMTTHPHHEAFVPRFCKRYAQLGNVIREGLESFKQDVEAGTFPSEAYSPYKMPAAELRAFQALMAQDATSRQTQAHRAAERLKQSDEYEQIKLY 373
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: CBN78365.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 405.6 bits (1041), Expect = 1.700e-109
Identity = 200/301 (66.45%), Postives = 240/301 (79.73%), Query Frame = 0 
Query:   73 KKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDAAVRKAQAEEAAERLKQSDEYEQI 374
            ++R  + ++MVTAYDYPSA+HV  AGIDI+L GDSV MVELGY TTQPV +  MLHHCKAV RGA+  L+V DMPFGSYEVS + A+  A RF+KEG  DAVK+EGG++RA  ++K+V GGIAVMGH+GLTPQAISVLGGFRAQGRTAVKAR++VDDALA+Q+AGAFAVV+ECVP PVA+A+T ALEIPTIGIGAGP TSGQVLVYHDMLGM  HPHH  FVPRFCK YA +G+ +R GLE F+++VE G FP E +SPYKMP  E   F  L+AKD   R  +     + L++ DEYE +
Sbjct:    7 RRRGERKVTMVTAYDYPSAVHVCRAGIDILLVGDSVGMVELGYDTTQPVTVGDMLHHCKAVGRGARTPLVVADMPFGSYEVSPKEALRTAIRFVKEGNVDAVKLEGGKNRAEHIRKVVDGGIAVMGHVGLTPQAISVLGGFRAQGRTAVKARQVVDDALAVQEAGAFAVVVECVPSPVAKAVTEALEIPTIGIGAGPCTSGQVLVYHDMLGMLQHPHHAQFVPRFCKNYASVGEEVRRGLENFRREVEGGVFPQEEHSPYKMPAGEEQQFKRLLAKDEHERLERLALKKKALEEQDEYETV 307
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: GAX22828.1 (3-methyl-2-oxobutanoate hydroxymethyltransferase [Fistulifera solaris])

HSP 1 Score: 402.9 bits (1034), Expect = 1.100e-108
Identity = 207/325 (63.69%), Postives = 252/325 (77.54%), Query Frame = 0 
Query:   64 KMSVLDLLHKKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAKRS----------LIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGR-DRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDAAVRKAQAEEAAERLKQSDEYEQIKLY 377
            K+S L L  KKR    I+MVTAYDYPSA+HV  AGIDIVL GDSVAMVELG+PTTQP+ +E MLHHC+AV RG +++          L+VGDMPF SYE  + ++A+ NA+RFI+E   DAVK+EGG   RA   +K+V+GG+AVMGH+GLTPQ+ISVLGGFRAQGRTA++AR ++DDAL LQDAG FAVV+ECVP  VA AIT +LEIPTIGIGAG HTSGQVLV+HDMLGMTSHPHHE FVP+FCKRYAQLG  I+ GL+ FK+DVE G FP+E YSPY+M + E   F  L+A+D   R+     AAE+  Q+DEYE++ LY
Sbjct:   28 KISALSLTSKKRHGHKITMVTAYDYPSAMHVARAGIDIVLVGDSVAMVELGHPTTQPMTLEAMLHHCQAVRRGVQQANNNNHNNAEPLLVGDMPFASYEYEDTDIALRNAYRFIQEAGMDAVKLEGGSVARARTARKLVEGGVAVMGHVGLTPQSISVLGGFRAQGRTAIRARAVLDDALRLQDAGCFAVVLECVPSNVAAAITESLEIPTIGIGAGNHTSGQVLVFHDMLGMTSHPHHEQFVPKFCKRYAQLGHIIQEGLQEFKRDVESGAFPNEEYSPYQMKENERRDFEALLAQDQEERETHHLAAAEKYIQTDEYEKLHLY 352
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: GAX12536.1 (3-methyl-2-oxobutanoate hydroxymethyltransferase [Fistulifera solaris])

HSP 1 Score: 389.0 bits (998), Expect = 1.600e-104
Identity = 197/303 (65.02%), Postives = 242/303 (79.87%), Query Frame = 0 
Query:   82 MVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAKRS------LIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGR-DRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDAAVRKAQAEEAAERLKQSDEYEQIKLY 377
            MVTAYDYPSA+HV  AGIDIVL GDS+AMVELG+ TTQP+ ++ MLHHC+AV RG +++      L+VGDMPF SYE  + ++A+ NA+RFI+E   DAVK+EGG   RA   +K+V+GG+AVMGH+GLTPQAISVLGGFRAQGRTAV+AR ++DDAL LQDAG FA+V+ECVP  VA AIT +LEIPTIGIGAG HTSGQVLV+HDMLGMTSHPHHE FVP+FCKRYAQLG  I+ GL+ FK+DVE G FPS+ Y+PY+M + E   F  L+A+D   R+ Q   AAE+  Q+DEYE++ LY
Sbjct:    1 MVTAYDYPSAMHVARAGIDIVLVGDSLAMVELGHITTQPITLDAMLHHCQAVRRGVQQAQVQEEPLLVGDMPFASYEYEDTDVALRNAYRFIQEAGMDAVKLEGGSVARARTARKLVEGGVAVMGHVGLTPQAISVLGGFRAQGRTAVRARAILDDALRLQDAGCFAIVLECVPSNVAAAITESLEIPTIGIGAGGHTSGQVLVFHDMLGMTSHPHHEQFVPKFCKRYAQLGHIIQEGLQEFKRDVESGAFPSDEYAPYQMKENERRDFEALLAQDQEERETQHLAAAEKYIQTDEYEKLHLY 303
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: OEU14017.1 (putative 3-methyl-2-oxobutanoate hydroxymethyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 383.3 bits (983), Expect = 8.900e-103
Identity = 193/320 (60.31%), Postives = 248/320 (77.50%), Query Frame = 0 
Query:   62 MKKMSVLDLLHKKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAK----RSLIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGRDRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDAAVRKAQAEEAAERLKQSDEYEQIKLY 377
            M K+S L L  KKRK + I+MVTAYD+PSA HV  AGIDI+L GDSVAMVELG+ TTQ V ++ M+HHC++V  G +     S+++GDMPFG+YE ++ ++A+ NA+RF+KE   DAVK+E    RA   QKI++GG+AVMGH+GLTPQAISV+GGFRAQGRTAV+AR+L+D+AL LQDAG F++V+ECVP  VA AIT  LEIPTIGIGAG  TSGQVLV+HDMLGM SHPHH+ FVP+FCK+YA++G +I+ GL  FK +VE G FP +AYSPY M + E + F  L+  DA  R+ + + AA +L Q+DEYE +KLY
Sbjct:    1 MAKVSALSLNSKKRKGKKITMVTAYDFPSAAHVARAGIDIILVGDSVAMVELGHETTQNVSLDSMIHHCQSVKNGIELADSGSMLIGDMPFGTYEFNDTDIALRNAYRFVKEAGCDAVKLE---YRALTAQKIIEGGVAVMGHVGLTPQAISVIGGFRAQGRTAVRARQLLDEALRLQDAGCFSIVLECVPANVAAAITETLEIPTIGIGAGGGTSGQVLVFHDMLGMLSHPHHQQFVPKFCKKYAEVGHSIQEGLNQFKSEVESGVFPGDAYSPYVMSEGEKETFDALLESDAEDRRMKHDAAATKLSQADEYETLKLY 317
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: XP_002289076.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94512.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 379.4 bits (973), Expect = 1.300e-101
Identity = 195/312 (62.50%), Postives = 242/312 (77.56%), Query Frame = 0 
Query:   68 LDLLHKKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGA-KRSLIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGGRD-RANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDAAVRKAQAEEAAERLKQSDEYEQIKLY 377
            L +  KKR+   I+MVTAYDYPSALHVD AGID+VL GDS AMVELG+ TTQP+ ++QM+HHC+AV RGA  R L++GDMPFGSYE    ++A+ NA+R +KEG  DAVK EGG + RA IV+ +V+GG+AV+GHIGLTPQAISVLGGFRAQGRTA++AR LVDDAL LQ+AGAFA+V+EC+P  VA AIT AL+IPTIGIGAG   SGQVLV+HD+LGMTSHPHHE FVP+FCK+YA++G  I  GL  FK++VE+G+FP E+YSPY M KEE   F  L+ +D        +E   + K  +E E + LY
Sbjct:   45 LTIAAKKRRGHKITMVTAYDYPSALHVDRAGIDVVLVGDSCAMVELGFDTTQPITLDQMIHHCQAVKRGAPNRPLLIGDMPFGSYEYENVDIALKNAYRMVKEGGMDAVKFEGGSESRAKIVRHVVEGGVAVLGHIGLTPQAISVLGGFRAQGRTALRARSLVDDALRLQEAGAFAIVLECIPANVAIAITQALDIPTIGIGAGGGCSGQVLVFHDLLGMTSHPHHEEFVPKFCKQYAKVGMEINDGLAQFKQEVEDGSFPGESYSPYIMMKEEEAIFDKLLKRDV------EKERTTQDKVMEEEESLSLY 350
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: XP_002176980.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51443.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 377.1 bits (967), Expect = 6.400e-101
Identity = 190/287 (66.20%), Postives = 228/287 (79.44%), Query Frame = 0 
Query:   62 MKKMSVLDLLHKKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARG--------AKRSLIVGDMPFGSYEVSE-ELAMTNAFRFIKEGFTDAVKIEGG-RDRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEE 339
            M K+S L L  K+R  + ISMVTAYDYPSA+HV  AG+DI+L GDSVAMVELGY  TQP+ +  MLHHC  V RG        ++  L+VGDMPFG+YE  + ++A+ NA+ F+KE   DAVK+EGG + RA   Q+IV+GG+AVMGH+GLTPQAISVLGGFRAQGRTAV+AR+LVD+AL LQDAG FAVV+ECVP  VA++IT+ LEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHH+ FVP+FCK+YAQ+G  I+ GL  FK DVE GTFPS+A+SPY M   E
Sbjct:    1 MTKVSALSLTSKRRHGKKISMVTAYDYPSAVHVARAGMDILLVGDSVAMVELGYENTQPITLRDMLHHCATVKRGVTAVASQVSQVPLLVGDMPFGTYEYQDTDVALRNAYAFVKEAGMDAVKLEGGSKARAQTAQRIVEGGVAVMGHVGLTPQAISVLGGFRAQGRTAVRARQLVDEALRLQDAGVFAVVLECVPSNVARSITDTLEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHDQFVPKFCKKYAQVGHMIQEGLLEFKADVENGTFPSDAFSPYVMTDAE 287
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: EJK68270.1 (hypothetical protein THAOC_10568 [Thalassiosira oceanica])

HSP 1 Score: 371.3 bits (952), Expect = 3.500e-99
Identity = 187/307 (60.91%), Postives = 237/307 (77.20%), Query Frame = 0 
Query:   73 KKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGA-KRSLIVGDMPFGSYE-VSEELAMTNAFRFIKEGFTDAVKIEGG-RDRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDAAVRKAQAEEAAERLKQSDEYEQIKLY 377
            KKR++Q I+MVTAYDYPSA+HVD AGIDI+L GDS AMVELGY TTQP+ +EQMLHHC+A  RGA  R L+VGDMPFG+YE +  ++A+ NA+R +KEG  DAVK EGG   RA  V+ +V+GG+AVMGH+GL PQ+ISV+GGFRAQGRTA +A +++++AL LQDAGAFAVV+EC+P  VA  IT+ LEIPTIGIGAGPHTSGQVLV+HD+LGM SHPHHE FVP+FCK+YA +G AI  GL++F++DVE G FP + YSPYKM  EE   F  ++    +    ++E       Q +E + + LY
Sbjct:  110 KKRRNQKITMVTAYDYPSAVHVDRAGIDILLVGDSCAMVELGYETTQPMTLEQMLHHCRAAKRGAPDRPLLVGDMPFGTYEFMDSDVALRNAYRLVKEGGMDAVKFEGGSASRARAVRHVVEGGVAVMGHVGLLPQSISVVGGFRAQGRTAERAGQILEEALRLQDAGAFAVVLECIPSNVANIITDRLEIPTIGIGAGPHTSGQVLVFHDLLGMLSHPHHEEFVPKFCKKYASVGLAINEGLDSFRQDVEGGVFPGDGYSPYKMSAEETLRFEKMLEGSLSGDMRKSES-----PQGEEIDDLSLY 411
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: OWZ20389.1 (3-methyl-2-oxobutanoate hydroxymethyltransferase [Phytophthora megakarya])

HSP 1 Score: 368.6 bits (945), Expect = 2.300e-98
Identity = 194/331 (58.61%), Postives = 237/331 (71.60%), Query Frame = 0 
Query:   29 RSFAAAAPSSDSVPPAGSPRASARSPLDGGNA----------SMKKMSVLDLLHKKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKD 350
            RS +A  P+    PPA S      S     N+            +K+S LD+   KRK +PI+MVTAYDYPSA+HVDLAG DI+L GDS+ MVELG  TT PV +E M+HH +AV RGA R L++ DMPFG+ E +   A+ NA R +KEG  D VKIEGG++RA  ++ IV GGIAVMGH+GL PQ ISVLGGFRAQGRTA +AR ++DDALA+Q AGAFAVV+ECVP  VA+A+T  L+IPTIGIGAGP T GQVLV+HD+LGM  HPHH  FVP+FCKRYA +G+ IR GLE ++ DVE G F SEAYSPYKM KEE      L+A++
Sbjct:    3 RSVSAIRPALMRSPPAISSAKLFSSDASSFNSESSARTLKLLERRKVSTLDIGIFKRKQKPITMVTAYDYPSAVHVDLAGFDILLVGDSLGMVELGMDTTLPVTLEDMIHHTQAVKRGANRPLVITDMPFGTCEGTPFEALKNAQRLMKEGGADCVKIEGGKERAETIKTIVDGGIAVMGHVGLRPQHISVLGGFRAQGRTAAQARMIIDDALAVQKAGAFAVVLECVPSAVAKAVTEILKIPTIGIGAGPETDGQVLVFHDLLGMLQHPHHAQFVPKFCKRYADVGEQIRIGLENYRDDVESGRFSSEAYSPYKMSKEETQKLHDLVAEE 333
[Close]
BLAST of NO03G01360 vs. NCBI_GenBank
Match: OQR93798.1 (3-methyl-2-oxobutanoate hydroxymethyltransferase [Thraustotheca clavata])

HSP 1 Score: 367.9 bits (943), Expect = 3.900e-98
Identity = 181/299 (60.54%), Postives = 236/299 (78.93%), Query Frame = 0 
Query:   40 SVPPAGSPRASARSPLDGGNASMKKMSVLDLLHKKRKHQPISMVTAYDYPSALHVDLAGIDIVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAKRSLIVGDMPFGSYEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRANIVQKIVKGGIAVMGHIGLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPVAQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKRYAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEE 339
            ++PP   P A+    L       KK++ LD+   KRK++PI+MVTAYDYPSA+HVDLAG D++L GDSV MVELG  TT PV ++ +++HCKAVARGAKR L+V DMPFG+ E     A+ NA R +KEG  D VK+EGG +RA  ++ +V+GGIAVMGH+GL PQAISVLGGFRAQGRTA +A ++++DALA+Q+AGAFAVVIECVP  VA+A+T+ L+IPTIGIG+GP+TSGQVLV+HD+LGM +HPHH  FVP+FCK+YA +G++IR GLE +++DVE   FP+E Y+PYKM  +E
Sbjct:    8 TLPPRQDPVANRTLKL----LERKKVTTLDIGILKRKNKPITMVTAYDYPSAVHVDLAGFDVLLIGDSVGMVELGMDTTIPVTLDDIIYHCKAVARGAKRPLLVADMPFGTCEGHRFDALKNAQRLMKEGGVDCVKVEGGAERAETIKTLVEGGIAVMGHVGLRPQAISVLGGFRAQGRTAKQAEQIIEDALAVQNAGAFAVVIECVPSVVAKAVTDILDIPTIGIGSGPNTSGQVLVFHDLLGMLTHPHHAQFVPKFCKKYADVGESIRVGLENYREDVENNRFPNEEYAPYKMSSDE 302
The following BLAST results are available for this feature:
BLAST of NO03G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29560.15.300e-16484.303-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
CBN78365.11.700e-10966.45conserved unknown protein [Ectocarpus siliculosus][more]
GAX22828.11.100e-10863.693-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
GAX12536.11.600e-10465.023-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
OEU14017.18.900e-10360.31putative 3-methyl-2-oxobutanoate hydroxymethyltran... [more]
XP_002289076.11.300e-10162.50predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002176980.16.400e-10166.20predicted protein, partial [Phaeodactylum tricornu... [more]
EJK68270.13.500e-9960.91hypothetical protein THAOC_10568 [Thalassiosira oc... [more]
OWZ20389.12.300e-9858.613-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]
OQR93798.13.900e-9860.543-methyl-2-oxobutanoate hydroxymethyltransferase [... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005773NSK005773Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01360.1NO03G01360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100006g74gene1053Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01360.1NO03G01360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01360 ID=NO03G01360|Name=NO03G01360|organism=Nannochloropsis oceanica|type=gene|length=1131bp
ATGTGGCCCACTCTCCGTCGCAGCCTATGCAGCACCATCAGAATACCACG
CTCTACACCAGCTCTTCCCACTGTCCACTTTAATCGTTCATTTGCCGCTG
CGGCTCCATCCTCTGATAGCGTGCCTCCTGCCGGGAGTCCGCGCGCCTCG
GCCCGCTCTCCCTTGGACGGGGGCAATGCCTCCATGAAAAAAATGTCGGT
CCTTGACCTGTTACACAAGAAACGAAAACATCAGCCCATCTCCATGGTTA
CGGCTTACGACTACCCTTCAGCCTTGCACGTGGACCTGGCCGGGATCGAC
ATTGTCTTGTGCGGTGACTCGGTAGCGATGGTCGAGCTGGGCTACCCCAC
CACCCAACCCGTCGACATGGAACAGATGCTTCACCATTGTAAAGCCGTCG
CTCGAGGTGCAAAGCGCTCCCTTATTGTAGGTGATATGCCTTTTGGCTCT
TACGAAGTTTCCGAAGAATTAGCCATGACAAATGCCTTCCGTTTTATCAA
GGAAGGCTTCACAGACGCTGTCAAAATCGAAGGCGGACGAGACCGGGCCA
ATATCGTCCAGAAAATTGTCAAGGGAGGAATAGCAGTCATGGGACATATC
GGCCTTACCCCCCAAGCCATCTCAGTGCTGGGAGGGTTCCGCGCTCAGGG
CCGCACGGCCGTCAAGGCTCGGAGGCTGGTGGATGACGCGTTGGCCTTGC
AAGACGCAGGGGCGTTCGCGGTGGTAATTGAATGTGTCCCCGGCCCAGTC
GCGCAAGCCATCACAAATGCCCTTGAGATCCCTACCATTGGAATAGGAGC
AGGGCCGCACACGTCGGGGCAGGTGTTGGTGTACCATGATATGTTGGGCA
TGACTTCCCATCCGCACCACGAAGCGTTTGTGCCGAGATTCTGTAAGAGA
TATGCTCAGCTTGGGGATGCGATACGATCGGGTTTGGAAGCATTTAAGAA
GGACGTGGAGGAGGGTACATTCCCTAGCGAGGCGTACAGTCCGTATAAGA
TGCCCAAGGAGGAATTGGATGCCTTCCTGACGTTGATGGCGAAAGACGCG
GCGGTGAGGAAGGCCCAGGCGGAGGAGGCGGCGGAACGATTGAAGCAGAG
TGATGAGTATGAGCAAATCAAGCTGTATTAG
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protein sequence of NO03G01360.1

>NO03G01360.1-protein ID=NO03G01360.1-protein|Name=NO03G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bp
MWPTLRRSLCSTIRIPRSTPALPTVHFNRSFAAAAPSSDSVPPAGSPRAS
ARSPLDGGNASMKKMSVLDLLHKKRKHQPISMVTAYDYPSALHVDLAGID
IVLCGDSVAMVELGYPTTQPVDMEQMLHHCKAVARGAKRSLIVGDMPFGS
YEVSEELAMTNAFRFIKEGFTDAVKIEGGRDRANIVQKIVKGGIAVMGHI
GLTPQAISVLGGFRAQGRTAVKARRLVDDALALQDAGAFAVVIECVPGPV
AQAITNALEIPTIGIGAGPHTSGQVLVYHDMLGMTSHPHHEAFVPRFCKR
YAQLGDAIRSGLEAFKKDVEEGTFPSEAYSPYKMPKEELDAFLTLMAKDA
AVRKAQAEEAAERLKQSDEYEQIKLY*
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Synonyms
Publications