NO03G01110, NO03G01110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01110 vs. NCBI_GenBank
Match: EWM29549.1 (protein of unknown function DUF336 [Nannochloropsis gaditana]) HSP 1 Score: 240.0 bits (611), Expect = 5.200e-60 Identity = 115/155 (74.19%), Postives = 133/155 (85.81%), Query Frame = 0 Query: 5 LSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLEGVVTEPIHHALK 160 LSLAQAV+ICE VA C ++GF PIT+VVMDP GH I+MQRMD+CAP A+PKFA AKAFTC+SLGVSTR FRDKYT AKDP K+CQML M D+TGGQMAPFPGGVVI+ A +G +VGAVGVSGASADEDEYCAL G++ A LEG+ TEP+ H+LK Sbjct: 2 LSLAQAVQICENAVAACLTKGFAPITIVVMDPTGHPIAMQRMDDCAPAAFPKFAHAKAFTCISLGVSTRAFRDKYTIAKDPTKYCQMLGMIDVTGGQMAPFPGGVVIR-AREGKVVGAVGVSGASADEDEYCALAGIEAANLEGMFTEPVCHSLK 155
BLAST of NO03G01110 vs. NCBI_GenBank
Match: EJK66045.1 (hypothetical protein THAOC_13052 [Thalassiosira oceanica]) HSP 1 Score: 140.6 bits (353), Expect = 4.300e-30 Identity = 74/156 (47.44%), Postives = 103/156 (66.03%), Query Frame = 0 Query: 2 PGGLSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLEGVVTEPIHHA 158 P ++L A ++ + + T GF PI V V+D + I +RMD A+P+F++AKAFTCV++ S+R FRDKYTA DPAK Q+ SM ++ MA FPGGV++K GD+VGA+GVSGA+ DEDEYCAL V ++GL G+ T+P H+ Sbjct: 65 PASMNLELADKLADRVIETAKRNGFAPIVVSVLDSNANQIVQKRMDGPVHAAFPEFSRAKAFTCVTMKTSSREFRDKYTADGDPAKMLQLTSM--MSIADMAAFPGGVLVKNM-SGDVVGAIGVSGAAGDEDEYCALRSVWDSGL-GLTTQPTEHS 216
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_062086874.1 (heme-binding protein [Caballeronia udeis] >SAL37016.1 hypothetical protein AWB69_03573 [Caballeronia udeis]) HSP 1 Score: 103.6 bits (257), Expect = 5.800e-19 Identity = 58/143 (40.56%), Postives = 93/143 (65.03%), Query Frame = 0 Query: 5 LSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLE 148 LSL+QA +I + T+A G P+TV V+D GH+++++R D+ + P+ AQAKA+ + +G+ R ++ AA+ PA F ++ D++ G++ P PGGV+I+ E GD++GAVGVSG +EDE CA G++ AGL+ Sbjct: 4 LSLSQASKIMDETLAKARKLGCAPMTVAVLDAGGHLLALKREDH-SSIMRPQIAQAKAWGALGMGMGGRALAER--AAQAPAFFA---ALTDISQGRIVPVPGGVLIRNGE-GDVIGAVGVSGDHPEEDEMCAAFGIESAGLK 139
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_092849320.1 (GlcG protein [Halomonas xianhensis] >SFI06357.1 Uncharacterized conserved protein GlcG, DUF336 family [Halomonas xianhensis]) HSP 1 Score: 98.2 bits (243), Expect = 2.500e-17 Identity = 58/143 (40.56%), Postives = 87/143 (60.84%), Query Frame = 0 Query: 5 LSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLE 148 +S QA +I EA + P+TVVV+D G+VI+ +R D CAP +P A+ KA+ + GV++RV ++ A+ PA + + D G+ P PGGVVI E+ ++GAVG+SGAS+DEDE A+ G++EAG + Sbjct: 12 ISRLQARQIIEAAFGNARNAAMEPLTVVVLDLGGNVIAAEREDGCAPLRFP-VAKGKAYAALGNGVASRVVGER--NAERPAFLASVAAASD---GKFVPVPGGVVILD-ENSQVIGAVGISGASSDEDEQAAMAGIREAGFQ 147
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_025240725.1 (GlcG protein [Pseudomonas stutzeri] >AHL74550.1 GlcG protein [Pseudomonas stutzeri]) HSP 1 Score: 97.1 bits (240), Expect = 5.500e-17 Identity = 59/144 (40.97%), Postives = 87/144 (60.42%), Query Frame = 0 Query: 8 AQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLE-GVV 151 AQA +I +A A ++ P+TV VMD G++I+ +R D CAP +P A+ KAF + GVS+R ++ + PA + + D G P PGGV+I + D +++GAVG SGAS+DEDE A+VG++ AGL G+V Sbjct: 15 AQARQIIDAAFAEARAKNMEPLTVFVMDAGGNLIAAEREDGCAPLRFP-VARGKAFAALGNGVSSRTVGERNESR--PAFLASVAAASD---GHFVPVPGGVLILSSND-EVIGAVGASGASSDEDEQVAVVGIEAAGLRAGIV 151
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_092962409.1 (GlcG protein [Roseomonas stagni] >SFK97321.1 Uncharacterized conserved protein GlcG, DUF336 family [Roseomonas stagni DSM 19981]) HSP 1 Score: 97.1 bits (240), Expect = 5.500e-17 Identity = 58/143 (40.56%), Postives = 84/143 (58.74%), Query Frame = 0 Query: 4 GLSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGL 147 G++ A A I +AT+A G P+TVVV+D GH+ + R D C+ P A KAF ++LG +R + TA M ++ DL GG+ P PGGV+++ A DG ++GAVGVSG ++D+DE CA+ G+ AGL Sbjct: 12 GITAAAARTIVDATLAKGRELGLAPLTVVVLDAGGHLKAALREDGCS-LLRPDIAWGKAFGAMALGFGSRELARRSTAMPG-----FMNALSDLAGGRAVPVPGGVLVRAA-DGAVLGAVGVSGDASDKDEVCAVAGITAAGL 147
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_003303434.1 (heme-binding protein [Pseudomonas stutzeri] >EMD98324.1 hypothetical protein B381_19771 [Pseudomonas stutzeri NF13]) HSP 1 Score: 96.7 bits (239), Expect = 7.100e-17 Identity = 56/143 (39.16%), Postives = 85/143 (59.44%), Query Frame = 0 Query: 5 LSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLE 148 +S +QA RI +A A ++ P+T VMD GH+I+ +R D CAP P A+ KAF + GVS+R ++ + + S+ + G P GGV+I A+D +++GAVGVSGAS+DEDE+ A+VG++ AG + Sbjct: 12 ISRSQARRILDAAFAEARAKALEPLTAFVMDGGGHLIAAEREDGCAPLRLP-VARGKAFAALGNGVSSRT-----VGERNDLRPAFLASVAAASEGNFIPVAGGVLILNADD-EVIGAVGVSGASSDEDEHVAMVGIEAAGFK 147
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_024849318.1 (heme-binding protein [Aminobacter sp. J41]) HSP 1 Score: 96.7 bits (239), Expect = 7.100e-17 Identity = 64/141 (45.39%), Postives = 79/141 (56.03%), Query Frame = 0 Query: 5 LSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAG 146 +SLAQA I EAT+A P+ VVV+D GH IS QR D +P + A+ KAF + G TR AA + F + LTGG M P PGGV IK +DGD VGAVGVSG ++D DE A VG++ AG Sbjct: 4 ISLAQANTIIEATLAKAAELKLNPLCVVVVDAGGHTISAQRQDG-SPFMRIEIARGKAFGAAATGADTRKLNQ---AAIERPHFVN--AFVALTGGNMIPVPGGVAIK-TKDGDFVGAVGVSGDTSDNDELVAKVGIEAAG 137
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_074293759.1 (GlcG protein [Paraburkholderia phenazinium] >SIN93163.1 Uncharacterized conserved protein GlcG, DUF336 family [Paraburkholderia phenazinium]) HSP 1 Score: 96.7 bits (239), Expect = 7.100e-17 Identity = 57/146 (39.04%), Postives = 92/146 (63.01%), Query Frame = 0 Query: 6 SLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLEGVVT 152 +L QA I +A +A G P+TV V+D GH+++++R D + P+ AQAKA+ + +G R ++ AA PA + ++ D++GG++AP PGGV+++ A+ G++VGAVG+SG D+DE CA+ G+ AGL+ VT Sbjct: 5 TLDQASVIVDAALAHARELGCHPLTVAVLDAGGHLLALKREDG-SGILRPQIAQAKAWGALGMGHGGRTLAER--AASAPAFYA---ALTDISGGRIAPVPGGVLVRDAQ-GNVVGAVGISGDHPDKDEACAMRGIGRAGLQADVT 143
BLAST of NO03G01110 vs. NCBI_GenBank
Match: WP_074294161.1 (GlcG protein [Paraburkholderia phenazinium] >SIO03152.1 Uncharacterized conserved protein GlcG, DUF336 family [Paraburkholderia phenazinium]) HSP 1 Score: 96.3 bits (238), Expect = 9.300e-17 Identity = 55/143 (38.46%), Postives = 92/143 (64.34%), Query Frame = 0 Query: 5 LSLAQAVRICEATVATCTSRGFGPITVVVMDPAGHVISMQRMDNCAPTAYPKFAQAKAFTCVSLGVSTRVFRDKYTAAKDPAKFCQMLSMGDLTGGQMAPFPGGVVIKGAEDGDIVGAVGVSGASADEDEYCALVGVQEAGLE 148 LSL+QA RI + + + P+TV V+D GH+++++R D + P+ AQAKA+ + +G+ RV ++ AA PA F ++GD++GG++AP PGGV+++ E+ D+VGA+G+SG ++ DE CA+ V+ GL+ Sbjct: 4 LSLSQASRIVDLALEKGRAINCMPLTVAVLDAGGHLLALKREDG-SGILRPQIAQAKAWGVLGMGLGGRVLAERALAA--PAFFA---ALGDISGGRIAPVPGGVLVRD-ENNDVVGAIGISGDKSEVDEICAVFAVESVGLK 139 The following BLAST results are available for this feature:
BLAST of NO03G01110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01110 ID=NO03G01110|Name=NO03G01110|organism=Nannochloropsis oceanica|type=gene|length=657bpback to top protein sequence of NO03G01110.1 >NO03G01110.1-protein ID=NO03G01110.1-protein|Name=NO03G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=161bpback to top Synonyms
Publications
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