NO03G00840, NO03G00840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO03G00840 vs. NCBI_GenBank
Match: EWM29550.1 (hypothetical protein Naga_100006g18 [Nannochloropsis gaditana] >EWM29551.1 hypothetical protein Naga_100006g18 [Nannochloropsis gaditana]) HSP 1 Score: 374.4 bits (960), Expect = 7.900e-100 Identity = 171/288 (59.38%), Postives = 218/288 (75.69%), Query Frame = 0 Query: 1 MDAVKDGGPPGWAMVGELGPAPGLEHLEHCRLAATTFGYIAYRLRKIGQIQHYKTLALLRAWDVYSFRKKIDITCGALGALFRVLATPIPKEIQICTQEQVEEDLALQHDRPLEDLLALHNMPLYLQRLMEEGQRQGSAMCGYTYANGHYQLWTDRVFAEKYFDAVEANARFESLAVLPCYLFGCLMSPRDRPCFYELLIEYMLTDSREDRNVSLQAEVKGKDGNVEVCLVRARHRVLNGGQYMAFALSILPLPHGTQDMCTVRHLRKCNAGNVEHIRLAASEKEREK 289 M+AV+DGGPPGWA+VGEL APGL+ L HCRLAATTF YI YRLRK G++QHYK +LRAWDVY +R K D+TCGAL L+R+LA+PIP + IC Q ++E++++ DRP+E+ L+ H+MP Y+ RL E +++G+A+CGYTY NGH+QLWTD +FAEKY+ A EANARF AVLPCYL+GCL PRDRPCFYELL+EY+LT E R +++ AEV DG E CLV+ARH V+N GQY+AFA+S LPL + + TV HLRKC+A + E + L E E EK Sbjct: 1 MNAVRDGGPPGWALVGELQSAPGLDRLSHCRLAATTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEGAAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPLANASASSYTVHHLRKCSAWHAERLDLPDLENEGEK 288
BLAST of NO03G00840 vs. NCBI_GenBank
Match: XP_005852521.1 (hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526] >EKU23311.1 hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 373.2 bits (957), Expect = 1.800e-99 Identity = 170/288 (59.03%), Postives = 218/288 (75.69%), Query Frame = 0 Query: 1 MDAVKDGGPPGWAMVGELGPAPGLEHLEHCRLAATTFGYIAYRLRKIGQIQHYKTLALLRAWDVYSFRKKIDITCGALGALFRVLATPIPKEIQICTQEQVEEDLALQHDRPLEDLLALHNMPLYLQRLMEEGQRQGSAMCGYTYANGHYQLWTDRVFAEKYFDAVEANARFESLAVLPCYLFGCLMSPRDRPCFYELLIEYMLTDSREDRNVSLQAEVKGKDGNVEVCLVRARHRVLNGGQYMAFALSILPLPHGTQDMCTVRHLRKCNAGNVEHIRLAASEKEREK 289 M+AV+DGGPPGWA+VGEL APGL+ L HCRLA+TTF YI YRLRK G++QHYK +LRAWDVY +R K D+TCGAL L+R+LA+PIP + IC Q ++E++++ DRP+E+ L+ H+MP Y+ RL E +++G+A+CGYTY NGH+QLWTD +FAEKY+ A EANARF AVLPCYL+GCL PRDRPCFYELL+EY+LT E R +++ AEV DG E CLV+ARH V+N GQY+AFA+S LPL + + TV HLRKC+A + E + L E E EK Sbjct: 1 MNAVRDGGPPGWALVGELQSAPGLDRLSHCRLASTTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEGAAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPLANASASSYTVHHLRKCSAWHAERLDLPDLENEGEK 288
BLAST of NO03G00840 vs. NCBI_GenBank
Match: EWM28051.1 (fungal specific transcription [Nannochloropsis gaditana]) HSP 1 Score: 211.1 bits (536), Expect = 1.200e-50 Identity = 112/260 (43.08%), Postives = 155/260 (59.62%), Query Frame = 0 Query: 6 DGGPPGWAMVGELGPAPGLEHLEHCRLAATTFGYIAYRLRKIGQIQHYKTLALLRAWDVYSFRKKIDITCGALGALFRVLATPIPKEIQICTQEQVEEDLALQHDRPLE---DLLALH--------NMPLYLQRLMEEGQRQGSAMCGYTYANGHYQLWTDRVFAEKYFDAVEANARFESLAVLPCYLFGCLMSPRDRPCFYELLIEYMLTDSREDRNVSLQAEVKGKDGNVEVCLVRARHRVLNGGQYMAFALSILPLP 255 DGGPP WA++ L P PGL + +HC+ A FG R+ G++QH KTLA+LR WD Y+ + IDI+CGA A+ RVLA + E E + ++P+E DLLA+ +MP Y+ L + G SA+ GY Y +G Y+LWT + FA+++ A N+ F+ +LPC+LFG ++P DRP FY LIEYML +RE R +++ A+V DG+V LVRAR+ VLN GQY FALS L +P Sbjct: 578 DGGPPSWALMAVLQPPPGLRYYDHCKTTAPLFGETVLRMIDTGRLQHLKTLAILRTWDFYNHKHGIDISCGASAAIVRVLALRKSAAYTSGSGES-SESVGTNAEQPVEWNDDLLAMDRQDALDQAHMPSYVSSLQDGGD---SAVGGYVYCSGQYRLWTGKRFADRFMTASTVNSLFDQTKILPCFLFGSFLAPNDRPNFYRSLIEYMLGPTREGREMTVTADVMELDGHVFKALVRARYMVLNEGQYSCFALSFLQIP 833
BLAST of NO03G00840 vs. NCBI_GenBank
Match: EWM25637.1 (hypothetical protein Naga_100037g11 [Nannochloropsis gaditana] >EWM25638.1 hypothetical protein Naga_100037g11 [Nannochloropsis gaditana]) HSP 1 Score: 178.3 bits (451), Expect = 8.400e-41 Identity = 91/244 (37.30%), Postives = 137/244 (56.15%), Query Frame = 0 Query: 12 WAMVGELGPAPGLEHLEHCRLAATTFGYIAYRLRKIGQIQHYKTLALLRAWDVYSFRKKIDITCGALGALFRVLATPIPKEIQICTQEQVEEDLALQHDRPLEDLLALHNMPLYLQRLMEEGQRQGSAMCGYTYANGHYQLWTDRVFAEKYFDAVEANARFESLAVLPCYLFGCLMSPRDRPCFYELLIEYMLTDSREDRNVSLQAEVKGKDGNVEVCLVRARHRVLNGGQYMAFALSILPLPH 256 W + GELG GLE +HC LAA F +A +L+ +G++QH K LA++R W+ K+D TCG L RVLA+P P + Q Q+ DL+L ++ L+ NMP ++ L EE S CG+ +A+G +++WT+ F+ +Y + N +LP + FG + SP R FYE + E+ML DS E S+ +E G+DG + LV R+ +LNGGQ FA+++ PL + Sbjct: 18 WTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLWL-LSIDKLMEPKNMPATVRSLREEAV---SMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEY 257
BLAST of NO03G00840 vs. NCBI_GenBank
Match: EWM29539.1 (hypothetical protein Naga_100006g24 [Nannochloropsis gaditana]) HSP 1 Score: 145.6 bits (366), Expect = 6.000e-31 Identity = 80/232 (34.48%), Postives = 129/232 (55.60%), Query Frame = 0 Query: 25 EHLEHCRL-AATTFGYIAYRLRKIGQIQHYKTLALLRAWDVYSFRKKIDITCGALGALFRVLATPIPKEIQICTQEQVEEDLALQHDRPLEDLLALHNMPLYLQRLMEEGQRQGSAMCGYTYANGHYQLWTDRVFAEKYFDAVEANARFESLAVLPCYLFGCLMSPRDRPCFYELLIEYMLTDSREDRNVSLQAEVKGKDGNVEVCLVRARHRVLNGGQYMAFALSILPLPH 256 +H+ C A TFG + RL+ G++QH + LA++ WD S +++D++CGA + R LA+ Q V ++ P +LL ++P ++ L +EG SA CG+ Y G +++WTD F+ +YFDA EAN VLPCYLFGC++ + F++ L +ML D+ E++ +S+ A+ G+D V L+R R+ V N G Y AL++LP+ + Sbjct: 59 KHVYECSSEAVLTFGRVTARLKTSGELQHERALAIIHTWDTTSRAQRVDVSCGAANLILRALASLNSTYASPVLQVPVRFGTSVA-CCPAGELLEGVHVPAFVAEL-DEGAT--SASCGFIYTGGEFRIWTDLNFSARYFDAEEANVYHIQAGVLPCYLFGCIIHRTYQEQFFDRLAVHMLKDNTEEKTMSMVAQTLGRDQVVTQNLLRIRYVVRNSGHYACLALNVLPIDY 286
BLAST of NO03G00840 vs. NCBI_GenBank
Match: XP_005855635.1 (hypothetical protein NGA_0674310 [Nannochloropsis gaditana CCMP526] >EKU20724.1 hypothetical protein NGA_0674310 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 70.9 bits (172), Expect = 1.900e-8 Identity = 67/257 (26.07%), Postives = 109/257 (42.41%), Query Frame = 0 Query: 6 DGGPPGW-----AMVGELGPAPGLEHLEHCRLA--ATTFGYIAYRLRKIGQIQHYKTLALLRAWDVYSFRKKIDITCGALGALFRVLATPIPKEIQICTQEQVEEDLALQHDRPLEDLLALHNMPLYLQRLMEEGQR-----QGSAMCGYTYANGHYQLWTDRVFAEKYFDAVEANARFESLAVLPCYLFGCLMSPRDRPCFYELLIEYMLTDSREDRNVSLQAEVKGKDGNVEVCLVRARHRVLNGGQYMAFALSI 251 DG PG+ A V +G APG L ++ AT + L GQ KT+A+LRAW++ S + D + GA + R LA + I Q++ + PL ++ + L+ EG R +G A+ Y GH +L + +F +A + E +LP +L+GCL +P + Y L + + + + V++ E G+ G RH V + G Y + +SI Sbjct: 109 DGKTPGFLLATDAAVNPVGAAPGRLRLAEYPVSTLATDLSHGFASLHYRGQSDTEKTIAVLRAWNLMSGTHRQDSSYGAFNQVVRALA--LDHVTAILVQQRPPNCRDMPPGTPLYGPMSEVSDDSDPSDLLHEGFRGFESGEGKAVAYYVMEGGHVRLSVNPLFESMLMSMTDALSLLEHHRMLPIFLWGCLFTPFSQRKLYGRLSQAIFSAASPVGEVTMDLECLGRKGEPFWGRTSVRHVVEDEGAYASCIISI 363 The following BLAST results are available for this feature:
BLAST of NO03G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00840 ID=NO03G00840|Name=NO03G00840|organism=Nannochloropsis oceanica|type=gene|length=3831bpback to top protein sequence of NO03G00840.1 >NO03G00840.1-protein ID=NO03G00840.1-protein|Name=NO03G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bpback to top Synonyms
Publications
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