NO03G00650, NO03G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00650 vs. NCBI_GenBank
Match: EWM30015.1 (dnaj heat shock n-terminal domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 133.3 bits (334), Expect = 7.000e-28 Identity = 88/188 (46.81%), Postives = 108/188 (57.45%), Query Frame = 0 Query: 7 TTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQ-PIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEH-GEGGWLVYPCRCGDGFRVRKDE----VEGRAGR--------------------------GIVVPCDGCSLRIRV 163 T S Y+ILGVSP+ASP+TIKRAYQ AA ATHPDK + R P + S P + +FL++QAAWD LR +R AYD R +R+E+ GF+A+EV+V EM+EEGGE G+ WL+YPCRCGD FRV K+E V G R CDGCSLRIRV Sbjct: 6 TLSLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSS---PRF-TFLEIQAAWDVLRARESRAAYDAAWGR-KRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRXXXXXXXXXXXXXXXXXCDGCSLRIRV 188
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_005853514.1 (hypothetical protein NGA_0483300, partial [Nannochloropsis gaditana CCMP526] >EKU22846.1 hypothetical protein NGA_0483300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 95.5 bits (236), Expect = 1.600e-16 Identity = 63/119 (52.94%), Postives = 80/119 (67.23%), Query Frame = 0 Query: 7 TTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQ-PIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEH-GEGGW 124 T S Y+ILGVSP+ASP+TIKRAYQ AA ATHPDK + R P + S P + +FL++QAAWD LR +R AYD R QR+E+ GF+A+EV+V EM+EEGGE G+ W Sbjct: 6 TLSLYDILGVSPAASPSTIKRAYQAAARATHPDKAAAHSKGGCRARPGHVSS---PRF-TFLEIQAAWDVLRARESRAAYDAAWGR-QRDEEVEGFIAEEVRVAEMEEEGGEEDGKERW 119
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_002460344.1 (DPH4 homolog [Sorghum bicolor] >XP_021309514.1 DPH4 homolog [Sorghum bicolor] >OQU89620.1 hypothetical protein SORBI_3002G227200 [Sorghum bicolor] >OQU89621.1 hypothetical protein SORBI_3002G227200 [Sorghum bicolor]) HSP 1 Score: 93.2 bits (230), Expect = 8.100e-16 Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEG-----------------RAGRGIVVPCDGCSLRIRV 163 + YE+L VS A+ I+ AY+ AAL THPDK L+ +P+ + F VQ AW+ LRHPT+R YD+QLQ ++ + +A E++V +M E + L+YPCRCGD F + K E+ G A IV+ C CSL+I++ Sbjct: 12 TLYEVLSVSEDATYDEIRAAYRSAALTTHPDKAHTTLE--SSVPSSEQQE-------FFSVQKAWEILRHPTSRADYDKQLQSSRQNIE---IIASEIEVGDMIIE--STADTLVLLYPCRCGDYFSITKCELSGMGHLVSGDGEVELQASDSASASIVLGCGSCSLKIKL 168
BLAST of NO03G00650 vs. NCBI_GenBank
Match: OWZ14192.1 (Heat shock protein 40 [Phytophthora megakarya]) HSP 1 Score: 92.4 bits (228), Expect = 1.400e-15 Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 0 Query: 7 TTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQ---REEQGGGFVADEVKVDEMDEE--GGEHGEGGWLVY--PCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRV 163 T SFYE+LGV+ + S ++RAY QAA HPDK + +S L FL VQ A++TLR R YD ++ + + EQ ++DEV +DEM E GE G+ +++ CRCGD + + K+E++ VVPC GCSL IRV Sbjct: 2 TVSFYEVLGVAATCSTDDVRRAYHQAARKYHPDKRSNGV---------TNSPILADEQQFLRVQEAYETLRSAELRRQYDAKILHDELVHKREQEVVVISDEVSLDEMQREVLQGEDGDEDEVIFTHQCRCGDMYEITKEELKDGVD---VVPCTGCSLHIRV 152
BLAST of NO03G00650 vs. NCBI_GenBank
Match: NP_001142310.1 (uncharacterized LOC100274479 [Zea mays] >ACF88161.1 unknown [Zea mays]) HSP 1 Score: 91.7 bits (226), Expect = 2.400e-15 Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPT--YPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGIVVPCDG 156 + YE+L VS A+ I+ AY+ AAL THPDK + T ++S S+P+ F VQ AW+ LRHPT+R YD+QLQ ++ + +A E++V +M E L+YPCRCGD F + E+ +G GIVV DG Sbjct: 12 TLYEVLSVSEDATYDEIRAAYRSAALNTHPDKAQ----------TTLESSSVPSTEQQEFSSVQKAWEVLRHPTSRAYYDKQLQSSRQSIE---IIASEIQVGDMIVESAAGALE--LLYPCRCGDYFSITSGEL---SGMGIVVTGDG 142
BLAST of NO03G00650 vs. NCBI_GenBank
Match: CBJ33333.1 (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 90.1 bits (222), Expect = 6.800e-15 Identity = 66/157 (42.04%), Postives = 83/157 (52.87%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPS--FLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEV-EGRAGRGIVVPCDGCSLRIRV 163 S YE+LGV SAS IK AYQ AALA+HPDK + + L S FL +QAAW+TLR R YD +L Q R V+DEV VD+M + +GG + CRCG+ + V +DE+ EG V+ C GCSL IRV Sbjct: 2 SKYEVLGVKRSASLQEIKGAYQAAALASHPDK-----------QASLATAELKAQASQRFLLIQAAWETLRDEDLRQEYDCRLDLQARNI----VVSDEVNVDDMH---FDEADGGSFSHECRCGEAYVVTRDELNEGFE----VLDCPGCSLYIRV 136
BLAST of NO03G00650 vs. NCBI_GenBank
Match: OQS05906.1 (hypothetical protein THRCLA_20501 [Thraustotheca clavata]) HSP 1 Score: 89.7 bits (221), Expect = 8.900e-15 Identity = 61/153 (39.87%), Postives = 80/153 (52.29%), Query Frame = 0 Query: 11 YEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGI-VVPCDGCSLRIRV 163 YE+LGV+ + S A IK+AY A LA+HPDK R S F DV AA+ LR TR AYD LQ + +++ ++DE+ +D+M E Y CRCGD + + DE+E G+ VVPCDGCSL IRV Sbjct: 5 YEVLGVASNCSQAEIKQAYHAAILASHPDKQR----------------SSDMTSQFQDVHAAYQALRQVDTRRAYDLLLQENKLKQEVR--ISDEIDLDDMTYIENEETYS----YSCRCGDSYNITVDELE----EGMDVVPCDGCSLNIRV 131
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_004973988.1 (DPH4 homolog [Setaria italica]) HSP 1 Score: 89.0 bits (219), Expect = 1.500e-14 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRK-------------DEVEGRAGRG----IVVPCDGCSLRIRV 163 + YE+L VS A+ I+ AY+ AAL THPDK L+ +P+ + FL VQ AW+ LRHP +R YD+QLQ ++ + +A E+K+ +M E + L+YPCRCGD F + EVE +A +V+ C CSL++R+ Sbjct: 71 TLYEVLSVSEDATYGEIRAAYKSAALNTHPDKGHMTLE--SSVPSSEQQE-------FLSVQRAWEILRHPASRADYDKQLQSSRQNIE---IIASEIKIGDMIVE--STADTVELLYPCRCGDYFSITSCELGDMGILVSGDGEVEQQASDSSSAFVVLGCGSCSLKVRL 227
BLAST of NO03G00650 vs. NCBI_GenBank
Match: KQL02622.1 (hypothetical protein SETIT_015799mg, partial [Setaria italica]) HSP 1 Score: 89.0 bits (219), Expect = 1.500e-14 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 0 Query: 9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRK-------------DEVEGRAGRG----IVVPCDGCSLRIRV 163 + YE+L VS A+ I+ AY+ AAL THPDK L+ +P+ + FL VQ AW+ LRHP +R YD+QLQ ++ + +A E+K+ +M E + L+YPCRCGD F + EVE +A +V+ C CSL++R+ Sbjct: 28 TLYEVLSVSEDATYGEIRAAYKSAALNTHPDKGHMTLE--SSVPSSEQQE-------FLSVQRAWEILRHPASRADYDKQLQSSRQNIE---IIASEIKIGDMIVE--STADTVELLYPCRCGDYFSITSCELGDMGILVSGDGEVEQQASDSSSAFVVLGCGSCSLKVRL 184
BLAST of NO03G00650 vs. NCBI_GenBank
Match: GAX97679.1 (Hypothetical protein PINS_005525 [Pythium insidiosum]) HSP 1 Score: 88.6 bits (218), Expect = 2.000e-14 Identity = 62/166 (37.35%), Postives = 86/166 (51.81%), Query Frame = 0 Query: 11 YEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQR----QQREEQGGGFVADEVKVDEM------DEEGGEHGEGGWLVY--PCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRVHR 165 Y++L V+ S I+RAY +AA HPDK FL VQAA++ LR PT R YD+QL + +QR+ + +ADE+ V EM DEE G+ G+ +VY CRCGD + + ++E+E +VPC+GCSL IRV R Sbjct: 9 YDVLQVTRECSADDIRRAYHRAARQHHPDK----------------QGERANEALFLRVQAAYEVLRDPTARVEYDKQLAQDALCRQRDVEDVR-IADEIAVSEMEREEIVDEECGDDGDARVVVYSHQCRCGDAYEITQEELEDGVD---IVPCNGCSLNIRVRR 154 The following BLAST results are available for this feature:
BLAST of NO03G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00650 ID=NO03G00650|Name=NO03G00650|organism=Nannochloropsis oceanica|type=gene|length=2359bpback to top protein sequence of NO03G00650.1 >NO03G00650.1-protein ID=NO03G00650.1-protein|Name=NO03G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=165bpback to top Synonyms
Publications
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