NO03G00500, NO03G00500 (gene) Nannochloropsis oceanica

Overview
NameNO03G00500
Unique NameNO03G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1938
Alignment locationchr3:157450..159387 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:157450..159387 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00500.1NO03G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00500.1NO03G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00500 ID=NO03G00500|Name=NO03G00500|organism=Nannochloropsis oceanica|type=gene|length=1938bp
ATGGCAGCCGGAGATCTTATAACTGTCGGGGCGGAGAATGCGGATAATTA
TGGCGTGGCATCCCCGGTGCTGATGGGGGCAGACTTGTTTTTAGGATCGG
GGATTCAGGTGGATTTAGGAGCACCCCTCACCAAGAATGTGGGTGTGCTC
CTCGCTGTCCTCTTTGGTATCGACGCCTTTATAGCCCCGGGAACGGCTGT
Ggtaggctatagcccataaagcatctatgttggaaaggctgcttggatca
atactgacgcatcccctgcattgaattttattttggtcgagaggaatggt
gtggctaagccgtggaagcattccgggtacaaactcttgacagccacgtc
caagacacctacaacgcgctttttgacggaaataacgacaagggtggacg
aggcaatagctgactcgcacgtcctttaagGCAGCAATACCATTAGCGAA
GGGACGCCGAACGATTAAAGCTTTGCCGGGCACTGAGTCACAAACTTTGG
ATGGTATCTTCGCCACACTAAGTGGCAACGCGACGACGTGCAACGCCCGC
GGCTTTAAGGGCGACATTACTACGGAATTTATTGAGGATGCCGCGGGGGC
CTGCTCCGACACCCAGAACGAACATCCAGCGGCGCGCAACTTGAATGACG
CCCGCACAGCTTCTGAGGACGGTTCTATGGCGGCTCCCCCAAATTGGATA
TCAAGTGCGACCAAACTCTATGACCCATTAATTGGCAAGACGAATTGGAT
CGACACCTCAGTGGTGACAAAGCATTTTGAAGTCCAGTTGTTCGGTGGAC
TACTCATCGGCACTGGCAATGGTGGAGCCCACCgtgtgtttggatgcagc
tcacgtgctagacattctttgtgagtcaatgagcacaatggacgaagggt
gcgctcgagtaaaattgcataccaaggatgaggcgacatattccgaaatt
gaggcaaacgacaattgggccgaggctttcgtggatcaacccacacggac
gtttgggacttatcttagaattacacatgatgccatctgcacagccgccg
tcacgacctgacttgaagactttatcccagATGTGTTTTTGACCTTGTTT
GGCGAGGTGGCACATGCAGGCGTGCACCTTGACGCGGCTGACTTGGGAAT
GATGAAGGTGCACAGAATCAAGGGAACGGATCTCGAAGATTCTGGTAAGC
AAATGTTTGAAGTGATGGCTACAGAGAACGCTGACACAGGCCTTCCTAGG
GTACATGTCAATGATGCTGAAATAACTGCGAGCAATAAGGAGGAAATCAC
CTTTGCCTCGACGGTCAACCGCTGGATTTTATCCAAAATCTTTGCGGGTG
TTGAGGCCCTCTTGGCTCTCGCCAACCTTTCTGCAGCCCAGCCCATCGCG
ATAGCACTTACATCAAAGTGCATCCTTACCATGTCGAAAAATTCAGTGAG
TATCTTGGTATCGTATACGCCTTTAGGCCGCATCTCGGTCCCCGTTCCTG
CCAACACGGCTTCGGGCACCTACTACCTCCATGCCACTCAGAACGGTCTC
TCCTGGTGCTCTCAGCTCGTGGACTACGTTGCTGCGGTGTAAGAATCACA
AATGTCAGATTAAAATTTTGTTTTTGTTCTGTCGTCGCCCATGTCTACCA
GCAGTAACAAGGTGTGTTGTCACAGGAAACTTAACAGGATTGAATCGACA
AGTACGAAGAAGTGATGCCGACTTCGGTGAGTGATAGAGAAATAGTGAGG
AAAAGATGAATACGCGGTTTAGGAGGCAAAATACGGAGTTTGCCTACGGA
CGCATGCATTTGGTCGACCGAATGCTATTGTAGTGCGTGTTTCTGCGAGA
CTAGCGCTAATATTAATATTAAACTCGCCCTTTATTCTTACTATGCACTC
ATCTGTTTGTGACCTTGGCTACAATCTCACACAAACCA
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protein sequence of NO03G00500.1

>NO03G00500.1-protein ID=NO03G00500.1-protein|Name=NO03G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MAAGDLITVGAENADNYGVASPVLMGADLFLGSGIQVDLGAPLTKNVGVL
LAVLFGIDAFIAPGTAVAAIPLAKGRRTIKALPGTESQTLDGIFATLSGN
ATTCNARGFKGDITTEFIEDAAGACSDTQNEHPAARNLNDARTASEDGSM
AAPPNWISSATKLYDPLIGKTNWIDTSVVTKHFEVQLFGGLLIGTGNGGA
HHVFLTLFGEVAHAGVHLDAADLGMMKVHRIKGTDLEDSGKQMFEVMATE
NADTGLPRVHVNDAEITASNKEEITFASTVNRWILSKIFAGVEALLALAN
LSAAQPIAIALTSKCILTMSKNSVSILVSYTPLGRISVPVPANTASGTYY
LHATQNGLSWCSQLVDYVAAV*
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Synonyms
Publications