NO03G00440, NO03G00440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00440 vs. NCBI_GenBank
Match: XP_005855283.1 (pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21084.1 pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 695.7 bits (1794), Expect = 2.000e-196 Identity = 428/762 (56.17%), Postives = 504/762 (66.14%), Query Frame = 0 Query: 1 MAGALVRLCTRAWRSSITAYRPRVTSLSYPYVGVVAPATAVVHSIISTTASYHASPLRLGRKGGASAFASKKNATPSAQA-RRRGSPPGASTGGRAREGQLKRPVLHPSQRSTLPAVSDMSELVDPDFQEMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-LSKEEALRRLDVDKKLADMSLRESYGGKGT------LALPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPLLEYDRLLRAYGLQNRISDADALLQSLLHRQLPVTTRTLTAYVYACSVASPPQPEAAEEEMAEWEGRGLPPPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGDGREGGKEGVEGKDDEEIDLRARSRFKKPGEGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVGKKKLDVPSLLISYEGSQDDXXXXXXXXXXXXXXXXXXXXXXXXXLLPSQARQVRGPSSSRXXXXXXSNSLVLKGGLLHALPSERERLQLDGILPFEGGEREADLVRARLPAGITVMDMQEKYLQAADAVVGEMEQRGMKLTTETMNLYLSVYTEGLRIQRALGVWEERF 755 M GA + R RSS +A RP + S ++ + P T + T YHA+ GRKGGASA + K+N +PS Q RRG+PP +STGGRAREGQL+RP LHPSQR+TLPAV+D SEL+DPDF+ MM LSKEEALRRLD+D+K ADM RE+ G ALPS C + EY+RLLRAYG+QNR+ +A ALL+SLL RQ PV+++TLTAYVYACS PP PEAAE EM WE GLP PDAWTW LVS YVRAGRREEAL F+RM+LAGH ++LA CT+V+QAL GR GR+ RE +LDFW+DMR+ GVEPDAVAYTVL+ + C+ TGDLERGLS LDEMEQ+SV PTLH +NTLLFTAARAPLWF GYS L+YELL RLE SG A D VTY+GLVR+CAQAGNPLLAE Y+ERM+EEG V++GVY+E LRAL RGQSAGVKGG IPKV G E KE DDEEIDLRARSR + PG+GKR XXXXXXXXXXXXXXXXXXXX ++K+D SLL+SY+G ++D LLP++ +RG S+ LVL+GGLL PSER R+QL+G+LPF G RE D VR+R+P G+TV DMQEKY+QAADAV+ MEQRG+ TTETMNLYLSVYTEGLRIQRA GVW ERF Sbjct: 1 MIGASIWPRARVGRSSSSAVRPLLPSFAFSGGWMHVPVT-IGMPTAPTIHCYHATIPLFGRKGGASALSPKRNTSPSTQRWMRRGAPPSSSTGGRAREGQLRRPFLHPSQRTTLPAVNDASELIDPDFELMMSELMRPIPSTGGNASLQDGGKEGREGAISNDEVLSKEEALRRLDLDRKYADMMRREARGSVAVGPSGSPTALPS------------PSPSSLDANVLPSSSPPAFQCAIAEYNRLLRAYGVQNRLPEAQALLRSLLSRQAPVSSQTLTAYVYACSACQPPAPEAAESEMQAWENNGLPSPDAWTWATLVSAYVRAGRREEALGTFQRMKLAGHPENLAACTSVLQALGQGR--GRKDREAMLDFWIDMRVAGVEPDAVAYTVLLQATCVSTGDLERGLSYLDEMEQLSVLPTLHVFNTLLFTAARAPLWFPGYSALLYELLARLESSGWAPDAVTYQGLVRICAQAGNPLLAERYIERMQEEGWGVTRGVYHEYLRALGRGQSAGVKGGGIPKV-TGME--KEPEREMDDEEIDLRARSRRRLPGQGKRVRRAEKLXXXXXXXXXXXXXXXXXXXXEVQGPQRKVDASSLLMSYDGGEED-AGGREKEEDATGKDADKSINPGGSLLPTEVETMRG---------HDSDHLVLQGGLLQRFPSERARIQLEGLLPFAEGVREVDWVRSRIPGGVTVKDMQEKYIQAADAVLRAMEQRGLTPTTETMNLYLSVYTEGLRIQRAWGVWRERF 734
BLAST of NO03G00440 vs. NCBI_GenBank
Match: EWM29502.1 (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 488.0 bits (1255), Expect = 6.400e-134 Identity = 277/496 (55.85%), Postives = 327/496 (65.93%), Query Frame = 0 Query: 1 MAGALVRLCTRAWRSSITAYRPRVTSLSYPYVGVVAPATAVVHSIISTTASYHASPLRLGRKGGASAFASKKNATPSAQA-RRRGSPPGASTGGRAREGQLKRPVLHPSQRSTLPAVSDMSELVDPDFQEMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-LSKEEALRRLDVDKKLADMSLRESYGGKGT------LALPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPLLEYDRLLRAYGLQNRISDADALLQSLLHRQLPVTTRTLTAYVYACSVASPPQPEAAEEEMAEWEGRGLPPPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGR 489 M GA + R RSS +A RP + S ++ + P T + T YHA+ GRKGGASA + K+N +PS Q RRG+PP +STGGRAREGQL+RP LHPSQR+TLPAV+D SEL+DPDF+ MM LSKEEALRRLD+D+K ADM RE+ G ALPS C + EY+RLLRAYG+QNR+ +A ALL+SLL RQ PV+++TLTAYVYACS PP PEAAE EM WE GLP PDAWTW LVS YVRAGRREEAL F+RM+LAGH ++LA CT+V+QAL GR GR+ RE +LDFW+DMR+ GVEPDAVAYTVL+ + C+ TGDLERGLS LDEMEQ+SV PTLH +NTLLFTAARAPLWF GYS L+YELL RLE SG A D VTY+GLVR+CAQAGNPLLAE Y+ERM+EEGR Sbjct: 1 MIGASIWPRARVGRSSSSAVRPLLPSFAFSGGWMHVPVT-IGMPTAPTIHCYHATIPLFGRKGGASALSPKRNTSPSTQRWMRRGAPPSSSTGGRAREGQLRRPFLHPSQRTTLPAVNDASELIDPDFELMMSELMRPIPSTGGNASLQDGGKEGREGAISNDEVLSKEEALRRLDLDRKYADMMRREARGSVAVGPSGSPTALPS------------PSPSSLDANVLPSSSPPAFQCAIAEYNRLLRAYGVQNRLPEAQALLRSLLSRQAPVSSQTLTAYVYACSACQPPAPEAAESEMQAWENNGLPSPDAWTWATLVSAYVRAGRREEALGTFQRMKLAGHPENLAACTSVLQALGQGR--GRKDREAMLDFWIDMRVAGVEPDAVAYTVLLQATCVSTGDLERGLSYLDEMEQLSVLPTLHVFNTLLFTAARAPLWFPGYSALLYELLARLESSGWAPDAVTYQGLVRICAQAGNPLLAERYIERMQEEGR 481
BLAST of NO03G00440 vs. NCBI_GenBank
Match: EWM29493.1 (hypothetical protein Naga_100287g9, partial [Nannochloropsis gaditana]) HSP 1 Score: 178.3 bits (451), Expect = 1.100e-40 Identity = 102/178 (57.30%), Postives = 125/178 (70.22%), Query Frame = 0 Query: 761 GEQGRALEGRRTRWGEVG--KVVADQTTYLHLVRMLVRAKRLGKAFEFLKEML---PSTTPSSSCTS--SVLLPSLPSSLPPPSADTLGVVMEALGRRGEIEPALYLLEVMVHDLHYTPKEWHLLPLRRALKARGLRHPLMPTDPRAWLEEGLKMRKKPDKGGRAVSQLVKSSMRAGQ 932 G Q G+ ++ G V KV ADQ+TY +LVRMLVRAKR+ AFE +K ML PS+TP S +A+TLGV+MEALGRRGE+EPALYLLEVMV DL YTP+EW L PLRR + ++GL HPLMP DPRAWL EGL++R++ DKGGR++ QL+KSSMRAGQ Sbjct: 1 GRQEEGDAGKTSKEGTVALDKVRADQSTYYYLVRMLVRAKRVLPAFELVKAMLRPAPSSTPPDHAASLXXXXXXXXXXXXXXXNAETLGVLMEALGRRGEVEPALYLLEVMVEDLKYTPREWFLTPLRRIMISQGLSHPLMPPDPRAWLREGLQIRRRVDKGGRSLRQLIKSSMRAGQ 178
BLAST of NO03G00440 vs. NCBI_GenBank
Match: EPR56540.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii GT1] >KFG33083.1 pentatricopeptide repeat domain-containing protein [Toxoplasma gondii GAB2-2007-GAL-DOM2] >KFG51422.1 pentatricopeptide repeat domain-containing protein [Toxoplasma gondii FOU]) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521 PP A + AL+ +V A A ++M D V T ++ LV ++ R+ FW G+EPD V +TV+I + C G+ ER ++LLD+M + PT TY L+ K +++ + ++ + + Y L+R CA GN A+ V +M E S +Y ++R A R+P+V D Sbjct: 959 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1160
BLAST of NO03G00440 vs. NCBI_GenBank
Match: XP_002366852.2 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii ME49] >EPT30481.1 pentatricopeptide repeat domain-containing protein [Toxoplasma gondii ME49]) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521 PP A + AL+ +V A A ++M D V T ++ LV ++ R+ FW G+EPD V +TV+I + C G+ ER ++LLD+M + PT TY L+ K +++ + ++ + + Y L+R CA GN A+ V +M E S +Y ++R A R+P+V D Sbjct: 959 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1160
BLAST of NO03G00440 vs. NCBI_GenBank
Match: ESS31680.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii VEG]) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521 PP A + AL+ +V A A ++M D V T ++ LV ++ R+ FW G+EPD V +TV+I + C G+ ER ++LLD+M + PT TY L+ K +++ + ++ + + Y L+R CA GN A+ V +M E S +Y ++R A R+P+V D Sbjct: 962 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1163
BLAST of NO03G00440 vs. NCBI_GenBank
Match: XP_008884340.1 (pentatricopeptide repeat domain-containing protein [Hammondia hammondi] >KEP65065.1 pentatricopeptide repeat domain-containing protein [Hammondia hammondi]) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521 PP A + AL+ +V A A ++M D V T ++ LV ++ R+ FW G+EPD V +TV+I + C G+ ER ++LLD+M + PT TY L+ K +++ + ++ + + Y L+R CA GN A+ V +M E S +Y ++R A R+P+V D Sbjct: 966 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1167
BLAST of NO03G00440 vs. NCBI_GenBank
Match: KFG34306.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii p89]) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521 PP A + AL+ +V A A ++M D V T ++ LV ++ R+ FW G+EPD V +TV+I + C G+ ER ++LLD+M + PT TY L+ K +++ + ++ + + Y L+R CA GN A+ V +M E S +Y ++R A R+P+V D Sbjct: 962 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1163
BLAST of NO03G00440 vs. NCBI_GenBank
Match: KFG60236.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii RUB]) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521 PP A + AL+ +V A A ++M D V T ++ LV ++ R+ FW G+EPD V +TV+I + C G+ ER ++LLD+M + PT TY L+ K +++ + ++ + + Y L+R CA GN A+ V +M E S +Y ++R A R+P+V D Sbjct: 967 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1168
BLAST of NO03G00440 vs. NCBI_GenBank
Match: KFH04764.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii VAND]) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521 PP A + AL+ +V A A ++M D V T ++ LV ++ R+ FW G+EPD V +TV+I + C G+ ER ++LLD+M + PT TY L+ K +++ + ++ + + Y L+R CA GN A+ V +M E S +Y ++R A R+P+V D Sbjct: 962 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1163 The following BLAST results are available for this feature:
BLAST of NO03G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00440 ID=NO03G00440|Name=NO03G00440|organism=Nannochloropsis oceanica|type=gene|length=4196bpback to top protein sequence of NO03G00440.1 >NO03G00440.1-protein ID=NO03G00440.1-protein|Name=NO03G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=932bpback to top Synonyms
Publications
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