NO03G00380, NO03G00380 (gene) Nannochloropsis oceanica

Overview
NameNO03G00380
Unique NameNO03G00380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2812
Alignment locationchr3:121879..124690 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:121879..124690 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00380.1NO03G00380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00380.1NO03G00380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00380 ID=NO03G00380|Name=NO03G00380|organism=Nannochloropsis oceanica|type=gene|length=2812bp
ATGCAGCATGTCACCCGCAGCAGGAGGGGTGGCGGCGGTAGTGACGTCGT
CGTCATGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGGAAGAGATCGCCTCAGCAGCAGTGTAAGAAGGGGGTGCCCGCAGCA
GATGAGGACAAGGAGAATGAGGAAGACGACGAAGGGATGGACGAGGTAGT
ATACGCGGAGCGCTCGGTCCAAGTAAATTTTCAAAGCCGGTGCACCCGTC
ACTCAGGAGGAAGAGGTGGAGGGAGGGAGGGAGCCGCTGAGGAGGATGAG
GAGGAAGAGGATAAAGAAGCGGAGGAGCAGGTCCAACAGTCAATGGCGGC
TGCTTCAGGCATAGGCAGGACGAGGAGGGGAGGTGCGGGTCAAAAGGCGC
CAACAGCAGTCGTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGTGGCGGGAGGAGGTGCTAGAGACAACGACAACTTCCTCCTC
GTCGGTAAGGATGACCATGGGGGGAGTCAAGAGCCAGGCGATTGGGAGGG
GATTTAGAAGAAAGCGATCCTTGGGGGTGGAGGTGTTGGTGGAGGAAGAA
GAGGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGATTTGAA
GGAAGACGAGGGTGGGAGGGAGGGAGAAGTCGTCACGGTGGAGGAGGAGG
TGGAGGAGGATGAGAAGGAGCACGAGCCGGATGTAAAGAAGAAGAAGCAG
CAGCAGTCGCGTGAGGAGAGGAGGCAGGAGAAGGGGAAGCGGACCTCGTT
GGGAAGTGGTGTGGCTTTTCCCCGAGCGGCTGCATGCGGTGCTTTATTCG
GAAAAGGACGAAGGAGGGAGGGGGGGACGGAGGAGGAGAAGAAGGTGGTG
CAGGAGGAGGAGGAAGGGGAGGGGGGTGAGGCAGAGGAGAAAGAGGAGAA
AAAGAAAAGCGATGAGGACGAGGACGAGGAGGAAGGGCCGAAACGTGGAG
GAATGAGTAGGCTTGTGCACCGTCGGAGGGAGAGGGAGCGAGGGAGCGAG
GGAGCGAGGGAGCATCCGACGACCACGAAAAAGATGACGTCAGGGGCTGT
GACGGTCACAGGTAAGAAGCAGGCTCGGTCGATGGGGGAGGGAGGGAGGG
AGGGAGGGAAGGACAAGAAGGTGGGGAAAGGGACGAGTGCGGTTGCCATG
TTGAAACGACAGCGAGTGGCTCCTCCTGCCCATGCTCCTGCTGCTGCTCC
TTCCTCGTCCTCGTCTTCCTTTCTTCCCTCCGTGGCGGTTCCCTTTCAGA
TGGATCGGCCCATGCATTGGGGCGGGGGCACGGGAGGGAGGACGGGAGCG
AGGACGGGAGGGAAAGGGGGTGGAGGCATCGGTATTGTTGTTGTGGATGC
TCCTGCGGGTGCTGTGGGAGGGGAGGGGGGGAGAAAGGGGGAAGGGGGAA
GAGGGAGGAAGCGGATGAGGGTCTCGACGGGGTCTGCTGCCGTGGAGGTC
GAGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTTGAGGACGCA
AGGGGCTATGATCCGTCGGCAGACCCTGCCAGGGTCCAAGAGGAAGGTGG
TGATGAGGGGATGGAGGGAGGGAGGAAGGGAAGGAGGAGGGGGGCAGGCG
GCAGTAGGAGACAGCATTAGTTTTTCACTGCCCTGGATGAAGGGGCCTGG
GAGGGGGGAAGAGATGGAGGGAGGGAGGAGGGGTTGGGCGATGAAGGAGG
AGGAGGTGGAGGAGGAAGAGAAGGAGTGCTCATTCGATGTGGAAGAGAGC
TTAGGGTGGAGGGAGGGAGGGAGGGAGAGGGGCGAGGGGCTGCTTTCGAG
CCCTTCCTCCTTCCCTTCCTCCTCCTCTTTTTTCCGCGGAACGCCGGGGC
AGCACGGAGGAGGGTACCGTCGTACAGGCTACCATCACACTCCCCTTGGG
TCGGGTGGAGGAGAGAGGGAAGGAGGGAGGGATGGAGGACGACGGAGGTC
CGTGAAGGACGGCCCATTGGGGAGTTTGTTGAGGAAGACACGGCATGGCG
TGGAAGGGGGGAGGGCGAGGTTGAGGAGCAAGGCATTCCCCCTTAGCAGG
TTTATGGAGGGAAGGAAGAGAGGGGTGGTTGATCTGGGTGATCCCAGGGG
CAGGTTTGCGTGCTTTGTGGATGTGGTGTTTGGGGCGCAGGGAGGGAAGT
GGGGGGAGGGGTTGGTCAGGGGGCTTGAGGCGTATGAAGGGAGGGTGGTG
GAGGTGGGAAGGGTGCAAGGAGGGGGGGAAGAGGGGGAGGGAGGGGCGCA
GCGGGTGTTGGAGGAGGAAGGGGGGGAGGGAGGGAGGGAGGGAGGGCTGG
GCCTGCCTGAGGGCGTTGAGGTGGTGGTCTTTTTTAGGAAGGATGGAGGG
GCACCACCGTTGCCTCTCCGCCTACCGTCGTCGTCCTCCTTCGCTTCCTC
CCTGTCATCAGAGCAGCTGGGGAGGGAGGGAGGGAGGGAGGGAGGAGAGG
AGGGAAGGAGAGAGGGAGGAAGGGAGGGAGGGAGGGAGGGGATGCGGCTT
CGGATATATGACCCCTGGTTGGTCAGGAAGGCCTCGGGGCTGGTGAAACG
ATTGCTGCGGGGGAAGGCAGAGGGGGAAGAGGGAGGGAGGGATGAAGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGGAGGCCAGGGAGGAAGCA
GGGAAGGAAGGGGAGGGAGGGGGGGCGCGGGGGTGGTATCCGGATTACGT
ATTGCTGTGTACGGAGTTGCACGAGCGGTGTCTGTTGGAGGAGGGGGGGG
AGTGAGCGAGGG
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protein sequence of NO03G00380.1

>NO03G00380.1-protein ID=NO03G00380.1-protein|Name=NO03G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=935bp
MQHVTRSRRGGGGSDVVVMEGGGGGGGGGGGGGGGKRSPQQQCKKGVPAA
DEDKENEEDDEGMDEVVYAERSVQVNFQSRCTRHSGGRGGGREGAAEEDE
EEEDKEAEEQVQQSMAAASGIGRTRRGGAGQKAPTAVVQQQQQQQQQQQQ
QQQWREEVLETTTTSSSSVRMTMGGVKSQAIGRGFRRKRSLGVEVLVEEE
EGEEEEEEEEEEEKDLKEDEGGREGEVVTVEEEVEEDEKEHEPDVKKKKQ
QQSREERRQEKGKRTSLGSGVAFPRAAACGALFGKGRRREGGTEEEKKVV
QEEEEGEGGEAEEKEEKKKSDEDEDEEEGPKRGGMSRLVHRRRERERGSE
GAREHPTTTKKMTSGAVTVTGKKQARSMGEGGREGGKDKKVGKGTSAVAM
LKRQRVAPPAHAPAAAPSSSSSSFLPSVAVPFQMDRPMHWGGGTGGRTGA
RTGGKGGGGIGIVVVDAPAGAVGGEGGRKGEGGRGRKRMRVSTGSAAVEV
EEEGGREGGREGGLRTQGAMIRRQTLPGSKRKVVMRGWREGGREGGGGQA
AVGDSISFSLPWMKGPGRGEEMEGGRRGWAMKEEEVEEEEKECSFDVEES
LGWREGGRERGEGLLSSPSSFPSSSSFFRGTPGQHGGGYRRTGYHHTPLG
SGGGEREGGRDGGRRRSVKDGPLGSLLRKTRHGVEGGRARLRSKAFPLSR
FMEGRKRGVVDLGDPRGRFACFVDVVFGAQGGKWGEGLVRGLEAYEGRVV
EVGRVQGGGEEGEGGAQRVLEEEGGEGGREGGLGLPEGVEVVVFFRKDGG
APPLPLRLPSSSSFASSLSSEQLGREGGREGGEEGRREGGREGGREGMRL
RIYDPWLVRKASGLVKRLLRGKAEGEEGGRDEEEEEEEEEEEREEAREEA
GKEGEGGGARGWYPDYVLLCTELHERCLLEEGGE*
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Synonyms
Publications