NO03G00350, NO03G00350 (gene) Nannochloropsis oceanica

BLAST of NO03G00350 vs. NCBI_GenBank
Match: CCA16494.1 (DNAdirected RNA polymerase II 36 kDa polypeptide A putative [Albugo laibachii Nc14])

HSP 1 Score: 263.8 bits (673), Expect = 7.100e-67
Identity = 151/338 (44.67%), Postives = 210/338 (62.13%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKDFRDCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGLPVNVTSADLTVTEDEEQQV--WVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDER-ENVVVARPRKCIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQLVHIAR 336
            MPN + PK+EIL+L+DDFIKF L +TDASVANALRRVMIAEVPTLAIDLV+ EVN+SV+ DE+LAHRLG+IPL                +DCDC+ HCP CSVE  LDV                E GM               L+VT D  + V  ++ P +F+S+ E +   D    G+ I +LGPGQ +RL+AIAK GIGKEHAKW+P AVAT+  EP +++N+      + E+K +L   CPT+V++ DE  E   +A   +C++C+EC  V  + K + +DD  V +   E++F+F+VETTG L   EVV  AL+I+  K++ ++ Q + +++
Sbjct:    1 MPNPQFPKVEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEVNTSVMTDEFLAHRLGMIPLLFDGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDVR--------------AEQGM---------------LSVTSDSLKSVDPYIRPVNFSSEEEFNNTQDT---GVIIAKLGPGQHIRLSAIAKLGIGKEHAKWAPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVVNSYKDNPEDDAAVTIQMQEDRFIFSVETTGQLKPEEVVICALDIIREKLSYLKHQCLELSQ 306          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: KUF73367.1 (DNA-directed RNA polymerases II [Phytophthora nicotianae])

HSP 1 Score: 260.4 bits (664), Expect = 7.900e-66
Identity = 149/351 (42.45%), Postives = 216/351 (61.54%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKDFR-------DCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGLPVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDERENVVVAR---------PRKCIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQLVHIAR 336
            MP+ R PK+++ EL+DDFI+F LS+TDASVANA+RRVMI+EVPTLAIDLVS E+N+SV+ DE+LAHRLG+IPL            L++FR       DCDCD +CP CSVE TLDV                + G+        ++VTS  L     +    ++ P +F+S+ E   L +    G+ I +LGPGQ +RL+AIAK GIGKEHAKWSP AVATY  +PI+++N+      S E+K +L   CPT+V++ DE    V  +           +C++C+EC  ++ + K + +DD  V +   E+KF+F+VETTG L   EVV  AL+++  K++ ++ Q + +++
Sbjct:    1 MPHPRFPKIDVQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFD-------GGLENFRQRFVYSQDCDCDENCPNCSVEFTLDV--------------IADSGV--------LSVTSEAL-----KSSDPYIRPVNFSSEEE---LNNTQDTGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSTYSPEQKAELYKSCPTEVYETDENYEQVRMKNWMLEERGDAMRCMYCDECVKLADSFKDNPEDDSAVTIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQ 314          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: GAX25417.1 (DNA-directed RNA polymerase II subunit RPB3 [Fistulifera solaris])

HSP 1 Score: 257.3 bits (656), Expect = 6.700e-65
Identity = 151/339 (44.54%), Postives = 205/339 (60.47%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKD----FRDCDCDLHCPRCSVELTLDVNY--HTKKQQLARMEGFGEGGMEGEASGLPVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDERENVVVARPRK---CIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQL 331
            MP  R PK+EIL ++   IKFILS+TD SVANALRR+MIAEVPTLAIDLV +  NSSVLNDEY+AHRLGLIP+R   P   K +D  D      +C C  HC RCSVE  LDV Y  H  +  LA                 P+ VTS DL    +      V PAHF S  E++   D    GI+IV+LGPGQ ++L AIA+ GI KEHAKWSP AVATY   P + +N E+   LS+E+K++LVD CP ++ ++D+    + A       C +  +      ALK  ++DD  V +  + ++F+F+VETTG + A EV+ +AL+++  ++ ++  +L
Sbjct:    1 MPQQRYPKVEILSVQPHEIKFILSETDTSVANALRRIMIAEVPTLAIDLVEYADNSSVLNDEYIAHRLGLIPIRYQKPDSMKGSDCTDAFLPHHECVCYEHCLRCSVEFELDVAYTVHGDEDVLA-----------------PLTVTSRDLRSNNE-----LVHPAHFLSSDEQEEAQD---DGIAIVKLGPGQKLKLKAIARLGIAKEHAKWSPVAVATYRFWPNIVLNDEQLATLSMEQKQELVDACPDRILEIDQTTGKLQAVENAWDICTYTEDLMYAQNALKRRKEDDDFVTVTPSTDRFIFSVETTGCMDADEVLMAALKVLKKRLNDLAREL 314          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: GAX20965.1 (DNA-directed RNA polymerase II subunit RPB3 [Fistulifera solaris])

HSP 1 Score: 255.0 bits (650), Expect = 3.300e-64
Identity = 150/338 (44.38%), Postives = 205/338 (60.65%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKD----FRDCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGL-PVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDERENVVVARPRK---CIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQL 331
            MP  R PK+EIL ++   IKFILS+TD SVANALRR+MIAEVPTLAIDLV +  NSSVLNDEY+AHRLGLIP+R   P   K +D  D      +C C  HC RCSVE  LDV+Y                 + G+   L P+ VTS DL    +      V PAHF S  E++   D    GI+IV+LGPGQ ++L AIA+ GI KEHAKWSP AVATY   P + +N E    LS+E+K++LVD CP ++ ++D+    + A       C +  +      ALK  ++DD  V +  + ++F+F+VETTG + A EV+ +AL+++  ++ ++  +L
Sbjct:    1 MPQQRYPKVEILSVQPHEIKFILSETDTSVANALRRIMIAEVPTLAIDLVEYADNSSVLNDEYIAHRLGLIPIRYQKPDSMKGSDCTDAFLPHHECVCYEHCLRCSVEFELDVSY----------------TVNGDEDVLAPLTVTSRDLRSNNE-----LVHPAHFLSSDEQEEAQD---DGIAIVKLGPGQKLKLKAIARLGIAKEHAKWSPVAVATYRFWPNIVLNDERLATLSMEQKQELVDACPDRILEIDQTTGKLQAVENAWDICTYTEDLMYAQNALKRRKEDDDFVTVTPSTDRFIFSVETTGCMDADEVLIAALKVLKKRLNDLAREL 314          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: XP_002181139.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47062.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 251.9 bits (642), Expect = 2.800e-63
Identity = 149/341 (43.70%), Postives = 208/341 (61.00%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKD----FRDCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGL-PVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDERENVVVARPRK---CIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQLVHI 334
            MP  R P++EIL ++   IKFILS++D SVAN LRR+MIAEVPTLAIDLV F  NS+VLNDEY+AHR+GLIP+R       K +D  D     R+C C  HC RCSVE  LD+ Y                 + GE   L P+ VTS DL V+ +E     V+PAHF S  E+D   D    G++IV+LGPGQ ++L AIA+ GI KEHAKW P AVATY   P + IN E+   L+LE+K++LVD CP ++ +LDE    + A       C +  + +    A+K   +DD  V +  ++++F+F VETTGA+ A E++ SA+ ++  ++  +  +L ++
Sbjct:    1 MPYQRFPRVEILSIQPQEIKFILSESDTSVANTLRRIMIAEVPTLAIDLVEFHENSTVLNDEYIAHRMGLIPVRYQPAESLKGSDCSDAFLPHRECVCYEHCMRCSVEFELDITYK----------------VTGEEDVLAPLTVTSKDL-VSNNE----LVQPAHFLSQDEQDEAQDE---GVAIVKLGPGQRLKLKAIARMGISKEHAKWCPVAVATYRFWPEIHINDEQMATLTLEQKQELVDTCPDRILELDEVTGDIRAVDNAWDICTYTEDLKFAQAAMKKRPEDDDFVTVTQSKDRFIFNVETTGAMDADEILLSAIRVLRNRLNYLAQELENL 317          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: GBG31293.1 (DNA-directed RNA polymerase II subunit rpb3 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 250.4 bits (638), Expect = 8.100e-63
Identity = 147/331 (44.41%), Postives = 202/331 (61.03%), Query Frame = 0

Query:    5 RAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKDFRDCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGLPVNVTSADL-TVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDER-ENVVVARPRKCIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQLVHI 334
            R PK+E+LELK+D+IKF+LSDTDASVANALRRV+IAE PT+AIDLV    NSS L+DE++AHRLGLIP+R ++   + V+ +   +DC CD  CPRCSV+ TLDV+ H    +  R+                  VTSADL + +    Q    E   F  +   D        GI+IV+LGPGQ ++   IA KGI K HAKW P +VAT+  +P + +N    D+L L KK++ V  CP  VF LDE+ E V V++   C+FC+EC  + +  K   ++D VV ++    +F+F+VETTGAL   E V SAL+++  K+T +   L  I
Sbjct:   12 RDPKIEVLELKEDYIKFVLSDTDASVANALRRVLIAETPTVAIDLVEIAENSSALHDEFIAHRLGLIPIRISS--QEGVSGMNYKQDCFCDSTCPRCSVKFTLDVS-HDDPDEAVRI------------------VTSADLKSDSAFAVQYSSTEEDDFVKETNPD-----LPSGITIVKLGPGQRIKCDCIAVKGISKIHAKWCPVSVATFAYDPEIELNDALMDELDLAKKQEFVKSCPADVFNLDEQTEKVSVSKRSACMFCDECVKLGETWKRSHEEDNVVSVSQVPNRFIFSVETTGALKPDEAVFSALKVLQDKLTLIGRHLSEI 316          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: XP_002289111.1 (RP3A,-like protein to dna-directed RNA polymerase II third largest subunit, partial [Thalassiosira pseudonana CCMP1335] >EED94547.1 RP3A,-like protein to dna-directed RNA polymerase II third largest subunit, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 248.4 bits (633), Expect = 3.100e-62
Identity = 145/322 (45.03%), Postives = 199/322 (61.80%), Query Frame = 0

Query:    5 RAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKDFRDCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGLPVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDERENVVVA---RPRKCIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKI 324
            R PK+EIL +    I+FILS+TD S+AN LRR+MIAEVPTLAIDLV +  NSSVLNDEY+AHRLGL+P+     R+     LK   +C C   CPRC VE  LDVN+    Q     E             L + VTS DL         + V PAHF ++ E+D   D    GISIV+LGPGQ ++L AIA+ GI KEHAKW P AVATY   PI++IN+E  + L+LE+K++LV+ CP ++ +LDE    +VA         F  + +TV  A+K   +DD  V++  + ++FVF+VE+TGA+ A E++ S+L ++  ++
Sbjct:    2 RFPKVEILSMAPHHIQFILSETDTSMANTLRRIMIAEVPTLAIDLVEYSENSSVLNDEYIAHRLGLVPI-----RFMAEGSLK---ECVCYDRCPRCCVEFELDVNFDKVNQTRPDTE-----------RDLALTVTSRDLI-----SNNMLVSPAHFLNEEEQDESHDE---GISIVKLGPGQHLKLKAIARMGISKEHAKWCPVAVATYRFWPIITINEEACNMLTLEQKQELVEACPDRILELDEITGNLVAVENAYEMATFTEDLKTVQNAMKKRPEDDDFVNVVQSTDRFVFSVESTGAMDAEEILLSSLRVLKDRL 296          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: OEU20572.1 (insert subdomain of RNA polymerase alpha subunit [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 247.7 bits (631), Expect = 5.300e-62
Identity = 140/335 (41.79%), Postives = 200/335 (59.70%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLK---------DFRDCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGLPVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDERENVVVARP---RKCIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKI 324
            MP+ R PK++IL++    ++FILS+TD SVAN LRR+MIAEVPTLAIDLV F  NSSVLNDEY+AHRLGLIP+     RY+ V  LK           R+C C   CPRCSVE  LDV +       +  E              P+ +TS DL    D      V PAHF S  E+D   D    G++IV++GPGQ ++L AIA+ GI KEH+KW P A+ATY   P ++IN+E+   LS+E+K++++D CP ++ ++D     + A       C +  + Q   + +K  ++DD  V + A+E++F+F VE+TG + A E+V S L ++  ++
Sbjct:    1 MPHQRFPKVQILQMAPHEMRFILSETDTSVANTLRRIMIAEVPTLAIDLVEFHENSSVLNDEYIAHRLGLIPI-----RYQPVDSLKGGDCNGAFLPHRECVCYERCPRCSVEFELDVTFDDANTFRSEEELMA-----------PLTITSKDLKSNNDT-----VAPAHFLSQDEQDESQD---AGVAIVKIGPGQRLKLKAIARMGIAKEHSKWCPVAIATYRFWPNITINEEQIATLSMEQKQEIIDVCPDRILEIDNVTGSIKAHDDAWDMCTYTEDLQEFQQTMKKRKEDDDFVTVEASEDRFIFTVESTGVMDAEEIVMSGLRVLKDRL 311          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: XP_024584665.1 (dna-directed rna polymerase ii subunit rpb3-a-like [Plasmopara halstedii] >CEG48296.1 dna-directed rna polymerase ii subunit rpb3-a-like [Plasmopara halstedii])

HSP 1 Score: 245.7 bits (626), Expect = 2.000e-61
Identity = 145/342 (42.40%), Postives = 207/342 (60.53%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKDFR-------DCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGLPVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDERENVVVARPRKCIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQLVHIAR 336
            MP+ R PK+EI EL+DDFI+F LS+TDASVANA+RRVMI+EVPTLAIDLVS E+N+SV+ DE+LAHRLG+IPL            L++FR       DCDCD +CP CSVE +LDV                + G+        ++VTS  L     +    ++ P +F+S+ E   L +    G+ I +LGPGQ +RL+AIAK GIGKEHAKWSP AVATY  +PI+++N+      + E+K +L   CPT+VF+ DE                  + ++ + K + +DD  V +   E+KF+F+VETTG L   EVV  AL+++  K++ ++ Q + +++
Sbjct:    1 MPHPRFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFD-------GGLENFRQRFVYSQDCDCDENCPNCSVEFSLDV--------------MADSGV--------LSVTSEAL-----KSSDPYIRPVNFSSEEE---LNNTQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSTYTPEQKAELYKSCPTEVFETDE----------------NYEQLADSFKDNPEDDSAVTIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQ 289          

BLAST of NO03G00350 vs. NCBI_GenBank
Match: EJK63419.1 (hypothetical protein THAOC_15929 [Thalassiosira oceanica])

HSP 1 Score: 245.0 bits (624), Expect = 3.400e-61
Identity = 143/337 (42.43%), Postives = 201/337 (59.64%), Query Frame = 0

Query:    1 MPNVRAPKLEILELKDDFIKFILSDTDASVANALRRVMIAEVPTLAIDLVSFEVNSSVLNDEYLAHRLGLIPLRSTNPRYKKVADLKD----FRDCDCDLHCPRCSVELTLDVNYHTKKQQLARMEGFGEGGMEGEASGLPVNVTSADLTVTEDEEQQVWVEPAHFTSDAEKDRLGDPAQGGISIVQLGPGQAVRLTAIAKKGIGKEHAKWSPCAVATYTNEPILSINKEEHDKLSLEKKKQLVDCCPTKVFKLDE---RENVVVARPRKCIFCNECQTVSKALKAHQDDDFVVHLAANEEKFVFAVETTGALTAGEVVESALEIVLGKITEVQTQL 331
            MP  R PK+EI  +    I F+LS+TD S+AN LRR+MIAEVPTLAIDLV +  NSSVLNDEY+AHRLGLIP+R +     K  D        R+C C   CPRCSVE  LDVN+   K  ++R E         +   LP+ VTS DL         V V PAHF ++ E+D   D    GISIV+LG GQ +RL AIA+ GI KEHAKW P AVATY   P ++IN+E  + L++E+K++LVD CP ++ +LDE                F  + +    A+K   +DD  V +  + ++F+F+VE++GA+ A +++ S+L ++  ++  +  ++
Sbjct:    1 MPQQRFPKIEIKHIAPHEITFVLSETDTSMANTLRRIMIAEVPTLAIDLVEYHENSSVLNDEYIAHRLGLIPIRYSPDGTLKGGDCHQAFVPHRECVCYDRCPRCSVEFDLDVNF--DKVNMSRPE---------QERDLPLTVTSRDLIA-----NNVQVSPAHFLNEEEQDNAHDE---GISIVKLGQGQHLRLKAIARMGISKEHAKWCPVAVATYRFWPEITINQEACNNLTMEQKQELVDACPDRILELDEITGNLKPTEGAEELATFTEDLKYAQDAMKRRPEDDDYVQVTHSTDRFLFSVESSGAMDAEDILLSSLRVLKDRLNYLAAEV 318