NO03G00300, NO03G00300 (gene) Nannochloropsis oceanica

Overview
NameNO03G00300
Unique NameNO03G00300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1765
Alignment locationchr3:89750..91514 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:89750..91514 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR084ncniR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00300.1NO03G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00300.1NO03G00300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00300 ID=NO03G00300|Name=NO03G00300|organism=Nannochloropsis oceanica|type=gene|length=1765bp
TACGGGGTGGCTCTTATATCGTCCATTCGCTTCACAATCTTTTGCTTCTA
TTTATCGGACTGCCTCAGCCACATATGTGCCCGAAACCACACCCCAAAAA
ACCAAGCCAACGCACAGGTAATTCACCTTTCTTCACCACGGCCGCGATAA
CTATTACCATCTAGACCACCGCAACAACAATCAGAACCGAGATCCCGTCC
CATACACGCTGATGGGCGTGCCCCTTTCCTCTAGCCTCAATACGCGTTCT
GCCCGACATCCTTCCACGTCGCTTCACCAAAGGACTCCCAGCATGCTGGG
AGTTAAATATAATGGAGGAATAGAGATAGGAGAAAGGGGAAAAGGTGTAC
GAGGTATAGGAGGGCTTGTTGAAGGGAGAAACAAGACGTGTCAAAAGCAG
AATGAGCATCACGAAGAACAACGCCAGCAAGACCAGCGATGGAAGCAGCA
GCGGCAGCTGTTCCAATGCAAGCAGCAGCAACAACAACGCGTCTTCGGTA
TGGGATGTGGTTACGGCTCTTGGGGTAATAGCCCGCCATCCAGTCCTCCT
CCTCCTACTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTTCCGTCCTTTGGTCATTT
TTAAGCCCTCTCCCTTCTCCCCATCCTTCGGCCCAACCATCTCCTCCTCG
TGCTTCCATCTCAATTTCTTATGGAGGTCTCTGGAAGACAAATTCCGGGA
GCTTGAGATCCCACTTCCCCATGAGGGGGAGAGAAAGGGAGAAAGGGAGG
AGGAAACAGAGGCATGGTTGCATCCTGTGGTTTATCGGGGCAAAGGGTAT
GAAGGGGGGGACATTGAGGAAGGTAGGGAGCAAGGGGCGAAGGAGGAGAG
TCAATTGGTGGGGTTGTCAGTAGGTGGAGGAGGAGGACGAGATAGAGAAG
AAGCGAGAGAAGAGAAGGAAAAGAAAGAAGAAAAGCAGAAAAAGAAGAAG
AGGGAAAAGGAAACGGAGGAACAAGGCGAAGGGAAATTGGAGGAGGAGAG
GCAAGAGAAGAAGATGGAGGAGCTGCTCGCTTCTGCTACTGCTGCTACTA
CAACTTCGCCCCGCAAAAGGCGATTTCAGCATCCACCACAGCAGTGGCAC
CATGGGCAGGAGCAGCAGCAACAACAACAACAGTATCATCGGCAGCAGCA
AGAGAAAGGGGAAGAGCAGCAGCAACAGCAGCTGACGCTGGGGCGCACAC
GAGAACAGAAGTGGCTCTGCAAACACGGAGGCAACAAAGAAGAGAAGGAC
GAGAAAGAATGGAGAGAAGGGAGGAGGAAAGGGAGGAGGGCAAGAAGGGA
GGGCGCAAGGAATATAGGTGTAAAGACACAGTTTTTGCGGGCATCGCTGG
GGAGGGAGAAAATGGCGCGAGGATGGAAAAACTTGATCCAGGCGCCGGCA
TTTTAGTCGGAGAGAAGGGAGGAGGTAGGAAGGAGGGAGGAAGGGAGGGT
GGATGTATGTGAATTAGTGGATATTTTTCGAATGTACGGTGGTGTGTGTC
TGGGTGTGGGCACGAGTAGTTGAGTTCAATAAGTAAGTTGGTAGGTAGCT
TTGAATCGTGTCAGAAAAAGCCAGTTTCCTACAGAATTAAGGGAAGAAGC
AATAGAAGCAGAAGGAGAAGAAGGAGAAGAAGGAGAAGAAGCAATAGAAG
CAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAG
back to top

protein sequence of NO03G00300.1

>NO03G00300.1-protein ID=NO03G00300.1-protein|Name=NO03G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MGVPLSSSLNTRSARHPSTSLHQRTPSMLGVKYNGGIEIGERGKGVRGIG
GLVEGRNKTCQKQNEHHEEQRQQDQRWKQQRQLFQCKQQQQQRVFGMGCG
YGSWGNSPPSSPPPPTLPPPPPPPPPPPPPPPPSSSSSSSFRPLVIFKPS
PFSPSFGPTISSSCFHLNFLWRSLEDKFRELEIPLPHEGERKGEREEETE
AWLHPVVYRGKGYEGGDIEEGREQGAKEESQLVGLSVGGGGGRDREEARE
EKEKKEEKQKKKKREKETEEQGEGKLEEERQEKKMEELLASATAATTTSP
RKRRFQHPPQQWHHGQEQQQQQQQYHRQQQEKGEEQQQQQLTLGRTREQK
WLCKHGGNKEEKDEKEWREGRRKGRRARREGARNIGVKTQFLRASLGREK
MARGWKNLIQAPAF*
back to top
Synonyms
Publications