NO03G00230, NO03G00230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00230 vs. NCBI_GenBank
Match: EWM29571.1 (uncharacterized protein Naga_100006g11 [Nannochloropsis gaditana]) HSP 1 Score: 440.3 bits (1131), Expect = 6.400e-120 Identity = 208/230 (90.43%), Postives = 218/230 (94.78%), Query Frame = 0 Query: 64 RFSFAATDPATAAAAGDGRVEIYNSISKGGFFSQTWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAHATNGSHPQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDVPIV 294 RFSFAAT+ + A GDGR+E+YNSIS+GGFFS+TWDVHHSKSKMRVRQVPGDGSCLFHAIYVALA+ATNGSHPQEDY+ MCKAAGVLRQTALDYLS DP+RLLTVTYNQDMKSQELL+MTSKEMGLSAEQYL RLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSP KSLHILIADCNFPDCAPYFYNKAGNHFLALFPCED V Sbjct: 65 RFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTV 294
BLAST of NO03G00230 vs. NCBI_GenBank
Match: XP_005854725.1 (hypothetical protein NGA_0375300 [Nannochloropsis gaditana CCMP526] >EKU21638.1 hypothetical protein NGA_0375300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 324.7 bits (831), Expect = 3.900e-85 Identity = 156/174 (89.66%), Postives = 166/174 (95.40%), Query Frame = 0 Query: 64 RFSFAATDPATAAAAGDGRVEIYNSISKGGFFSQTWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAHATNGSHPQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSR 238 RFSFAAT+ + A GDGR+E+YNSIS+GGFFS+TWDVHHSKSKMRVRQVPGDGSCLFHAIYVALA+ATNGSHPQEDY+ MCKAAGVLRQTALDYLS DP+RLLTVTYNQDMKSQELL+MTSKEMGLSAEQYL RLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSR Sbjct: 65 RFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSR 238
BLAST of NO03G00230 vs. NCBI_GenBank
Match: CBN76533.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 165.6 bits (418), Expect = 3.000e-37 Identity = 84/201 (41.79%), Postives = 117/201 (58.21%), Query Frame = 0 Query: 89 ISKGGFFSQTWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAHATNGSHPQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCED 290 I + GF + ++ V + M VRQVPGDG+CLFHAI L HA NG+HP D ++ + LR+ A+DYL + + L + + + ELL + + + ++AE Y +R WGGG EIVAL+NAL RPI +YEL G+ F F++M G P F +++HIL AD FP+ P GNHFLALFPC + Sbjct: 31 IKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGV----SFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPE 227
BLAST of NO03G00230 vs. NCBI_GenBank
Match: XP_002182194.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46095.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 136.7 bits (343), Expect = 1.500e-28 Identity = 76/192 (39.58%), Postives = 109/192 (56.77%), Query Frame = 0 Query: 109 RVRQVPGDGSCLFHAIYVALAHATNGSH------PQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLF------WSRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCE 289 ++RQVPGDG+CLFH+I + L +A NG+H + D + + + LR+ A++ L Q R L + + +++ EL++ +++ LS E+Y A ++ WGGG EIVAL N L+RPI +YEL FV ++M G PKF + LHIL AD FPD P +GNHFLALFP E Sbjct: 92 QIRQVPGDGNCLFHSISLCLQYAANGTHWDLNTSDRRGLDALYEHSQTLRRKAVEVL-QHSQRRLFLQGRESLRAHELVQAAAQQYNLSPEEYCASMQQDSVWGGGPEIVALCNVLQRPIHVYELASTTTRSSRNDDERQSFVLRRMACFGSPKFDRRQPLHILSADSRFPDVTPGQQLASGNHFLALFPHE 282
BLAST of NO03G00230 vs. NCBI_GenBank
Match: GAX17111.1 (hypothetical protein FisN_5Hu497 [Fistulifera solaris]) HSP 1 Score: 136.0 bits (341), Expect = 2.600e-28 Identity = 77/203 (37.93%), Postives = 114/203 (56.16%), Query Frame = 0 Query: 101 VHHSKSKMRVRQVPGDGSCLFHAIYVALAHATNGSH--PQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYEL---------------KPVGLLFWSRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALFP 287 V+H+ ++RQVPGDG+CLFH++ + L HA NG+H D++ + + LR A+ L Q+ R L + + M++ EL+ +++ L+ E+Y A + + WGGG EIVAL+N L+RPI +YEL KP F+ K+M G P+F ++LHIL AD FPD P AGNHFL++FP Sbjct: 81 VYHTNHPCQIRQVPGDGNCLFHSLSLCLQHAVNGTHWDMPNRLDELYEHSRSLRAKAVACLRQN-KRKLFLQGKESMRAIELVTSAAQQYDLTPEEYCATMEEDCVWGGGPEIVALSNILQRPIHVYELAMESPGAEDATDQPKKPT-------FILKRMACFGSPRFDGKRALHILSADSRFPDIQPGEQMVAGNHFLSVFP 275
BLAST of NO03G00230 vs. NCBI_GenBank
Match: XP_002292730.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89926.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 133.7 bits (335), Expect = 1.300e-27 Identity = 81/225 (36.00%), Postives = 111/225 (49.33%), Query Frame = 0 Query: 87 NSISKGGFFSQTWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAHATNGSH-----PQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFW--------------------SRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALFP 287 N K G S+T+ + +RQVPGDG+CLFH+I V L NG+H P+ + C++ LR A+D L P + L + + +++ ELL + + L E+Y +R WGGG EIVAL N L+RPI +YEL P ++F ++M G PK+ + LHIL AD FPD P K GNHFLALFP Sbjct: 125 NIRGKHGPRSRTYPKSLVDIPVEIRQVPGDGNCLFHSIAVCLYKVVNGTHISMDSPRSIHQLRCQSLH-LRNCAVDVLQNVPRKRLFLQGEEYLEANELLGAAAAQFELDGEEYCELMRKESYWGGGPEIVALCNYLQRPIHIYELIPTQXXXXXXXXXXXXXXXXXEHAQPTSTQFTLRRMACFGSPKYDRREPLHILSADSRFPDIEPRKIRKVGNHFLALFP 348
BLAST of NO03G00230 vs. NCBI_GenBank
Match: EJK68083.1 (hypothetical protein THAOC_10778 [Thalassiosira oceanica]) HSP 1 Score: 122.9 bits (307), Expect = 2.300e-24 Identity = 77/212 (36.32%), Postives = 107/212 (50.47%), Query Frame = 0 Query: 108 MRVRQVPGDGSCLFHAIYVALAHATNGSH-PQEDYDDMCKAAG---VLRQTALDYLSQDP---------------NRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVG--------------LLFWSRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALFP 287 +R+RQVPGDG+CLFH+I V L A NG+ P + ++ + + LR A+D L Q P R+L + ++ +++ ELL + + L E+Y +R WGGG EIVAL N L+RPI +YEL P L ++F ++M G PKF + LHIL AD FPD + GNHFLAL P Sbjct: 137 VRIRQVPGDGNCLFHSIAVCLYRAVNGTDIPMDSHECIGRLRDQSLALRNAAVDVLQQQPTKPGVQFIDSIGPKTRRVLFLQGDEYLEAHELLNAAAAQFDLDGEEYCNLMRKESYWGGGPEIVALCNYLQRPIHIYELIPSDEKASSRASQEKYKKLKVSNQFSLRRMACFGSPKFDRKEPLHILSADSRFPDVEA---RRMGNHFLALHP 345
BLAST of NO03G00230 vs. NCBI_GenBank
Match: XP_005763676.1 (hypothetical protein EMIHUDRAFT_120387 [Emiliania huxleyi CCMP1516] >EOD11247.1 hypothetical protein EMIHUDRAFT_120387 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 114.0 bits (284), Expect = 1.000e-21 Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = 0 Query: 110 VRQVPGDGSCLFHAIYVALAHATNGSHPQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPN-KSLHILIADCNFPDCAP---YFYNKAGNHFLALFP 287 V+QV G G CLFH+I +++A+ N +H + LRQ A+D L+ DPN L + +Q + + EL+ +++ +++E Y + +R WGGG EI+AL NA++RPI ++E PV + F + G PKF + K + I+ AD FP C P + + GNHFLAL P Sbjct: 90 VQQVQGTGDCLFHSIAISMAYDDNCTHVDMHDPWLDGRVRELRQLAVDTLTADPNCSLHLEGDQSITASELVAAAAEQYNMTSEDYCSSMRRKGVWGGGPEILALVNAMKRPIHVFE--PVAACNGTEFRLQLCGAFGSPKFDKSGKRVCIIAADDRFPKCKPADVKRHGEGGNHFLALIP 268
BLAST of NO03G00230 vs. NCBI_GenBank
Match: CBJ29467.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.4 bits (272), Expect = 2.600e-20 Identity = 66/225 (29.33%), Postives = 109/225 (48.44%), Query Frame = 0 Query: 69 ATDPATAAAAGDGRVEIYNSISKGGFFSQTWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAHATNGSHPQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQD-MKSQELLEMTSKEMGLS-AEQYLARLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDVP 292 A + A A G + + + GF V M RQVP +G+ LF A+ ++ +G HP ++ A LRQ LDYL++ + + + M ++ + +K ++ ++YL +RD WGGG E+V L + L+RP+ +Y+L G RF + + G P ++ + +HI+ FPD P + GNH++AL+P EDVP Sbjct: 184 AHEEKKAQDAESGTPKHTGVVDEDGFCRDLLAVQAMSGAMVARQVPVNGNALFSAVAISKWFIESGEHPDASSPEIETIAKDLRQKTLDYLTKAYKENAPIYMSGEYMDARPFVAAQAKANSMADGDEYLQAMRDDTMWGGGGEVVGLTHVLKRPLHVYDLVSTG----RRFGLRVIGRFGAPLYAKERPIHIVSTYARFPDLDPGSQSAEGNHYVALYPYEDVP 404
BLAST of NO03G00230 vs. NCBI_GenBank
Match: EJK74977.1 (hypothetical protein THAOC_03316, partial [Thalassiosira oceanica]) HSP 1 Score: 95.9 bits (237), Expect = 3.000e-16 Identity = 69/184 (37.50%), Postives = 96/184 (52.17%), Query Frame = 0 Query: 105 KSKMRVRQVPGDGSCLFHAIYVALAHATNGSHPQEDYDDMCKAAGVLRQTALDYLSQDPNRLLTVTYNQDMKSQELLEMTSKEMGLSAEQYLARLRDPKEWGGGLEIVALANALERPIFL---YELKPVGLLFWSRFVFKKMVECGMPKFSPNKSLHILIADCNFPDCAPYFYNKAGNHFLALF 286 K +R+RQVPGDGSCLFH+I AL S +D A +LR A+D LS+ NR L ++ ++ + S L+EM SK+ G+S +YL +++ WGGG EIVA+AN L R I L YE + F + G P +H+L + FP F K NHF+A+F Sbjct: 112 KVPVRIRQVPGDGSCLFHSIAAALILDDQHSASIDD-------ARILRSCAVDVLSEG-NRHLRLSRDERITSARLVEMASKQYGISPSRYLKEMKEDCVWGGGPEIVAVANHLGREIVLLEEYEESTAEIELHVLARFGGLARLGGP------PIHVLSTNQKFP--KERFKRK--NHFVAVF 277 The following BLAST results are available for this feature:
BLAST of NO03G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00230 ID=NO03G00230|Name=NO03G00230|organism=Nannochloropsis oceanica|type=gene|length=3156bpback to top protein sequence of NO03G00230.1 >NO03G00230.1-protein ID=NO03G00230.1-protein|Name=NO03G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bpback to top Synonyms
Publications
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