NO03G00170, NO03G00170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00170 vs. NCBI_GenBank
Match: EWM29995.1 (rhomboid domain-containing protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 358.2 bits (918), Expect = 3.700e-95 Identity = 191/300 (63.67%), Postives = 226/300 (75.33%), Query Frame = 0 Query: 1 MYGPPYYQRRGRPRAQQGGGRRNNDLYLIYVLISTCLRHVSELDYKPPITIALLVINILVHILPELFLPWGIDFRSVRGICLQPARILEVLLPSLFAFFSIFDSSSXXXXXXXXGSSWAQ--RLWEAATGTAFTXXXXXXXXXXXXSPSAYDRWHEGLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVL 299 MYGPP Y+ RGRP +Q GRRNND Y+IYVL+ST R+++EL+YKPP+TIA L +NI+VH++PE FLPWG DFRSVR ICL PA ILE LLPSL + FS + G + + +W F+ SPS +DRW E SR +LSALVHGDDVHLYYNMLSLLYKG TLERALGS FLRLV F+W VSHTLILLLA+FLH+L F PS +SFY+CSVGFSAVLF+LKYV+Y+RDP WT+VAGF+VPLGKASW+ELVVTSFL+PNASF GHLCGI+AG+L Sbjct: 1 MYGPP-YRPRGRPYPRQ--GRRNNDSYIIYVLLSTIFRYINELEYKPPVTIAFLTLNIMVHLMPEFFLPWGFDFRSVRDICLLPAHILE-LLPSLSSLFSSVQGDTLGRGLGRGGRNRPRSGNVWAEFIRNNFS---SYRSSSAWWSPSMHDRWREAASRIFLSALVHGDDVHLYYNMLSLLYKGATLERALGSLPFLRLVFFAWGVSHTLILLLATFLHSLSF--PS-SSFYSCSVGFSAVLFALKYVSYARDPDSWTTVAGFRVPLGKASWVELVVTSFLTPNASFLGHLCGILAGIL 290
BLAST of NO03G00170 vs. NCBI_GenBank
Match: CBN77058.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 146.7 bits (369), Expect = 1.700e-31 Identity = 113/324 (34.88%), Postives = 151/324 (46.60%), Query Frame = 0 Query: 31 VLISTCLRHVSELDYKPPITIALLVINILVHILPELF---------LPWGI---DFRSVRGICLQPARILEVLLPSLFAFFSIFDSSSXXXXXXXXGSSWAQRLWEAATGTAFTXXXXXXXXXXXXSPSAYDRWHE-GLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWVEGG---KVDGWVRGRMREVRRR---YTYRSGASGYHVPPTA 336 +L + +S+L +KPP+T+AL+ +H+ P++F W F +R +CL PA IL+ Y+R E + R +S VHGDD+HLYYNM S L KGV+LE +G+ F L+ FS S TL++L A L + +P + + C+VGFS VLF+LKYV R P G TSV GF V A+W+ELV+ S + PNASF GHLCGI+AGVL+VE +V G RR YTY SG SG P A Sbjct: 38 ILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRKGVFEWSWLTGGFDHIRNVCLLPASILD----------------------------------------------------------TYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVP---SPMHACAVGFSGVLFALKYVLSRRSP-GVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSGRASPEGA 299
BLAST of NO03G00170 vs. NCBI_GenBank
Match: CCA15102.1 (serine protease family S54 putative [Albugo laibachii Nc14]) HSP 1 Score: 127.1 bits (318), Expect = 1.400e-25 Identity = 74/155 (47.74%), Postives = 98/155 (63.23%), Query Frame = 0 Query: 146 PSAYDRWHEGLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWV 301 P+ R HE R SA HGDD+HLY+NM+S L+KG LE +GS F L+++ VSH LI+L + + L P ++T CS+GFSAVLF LK V S+ P +++ GFQVP A+W+ELV+ L P+ASF GHLCGIVAG W+ Sbjct: 67 PNLIVRRHE-WERLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYHFACLLIYLLLVSHGLIVLASYLIFKLQHNPHAWTQ---CSLGFSAVLFGLKVVLNSKSP-NTSNIYGFQVPTKYAAWLELVLIHVLVPDASFLGHLCGIVAGYSWI 216
BLAST of NO03G00170 vs. NCBI_GenBank
Match: XP_020608454.1 (rhomboid-related protein 4-like [Orbicella faveolata]) HSP 1 Score: 126.7 bits (317), Expect = 1.800e-25 Identity = 77/190 (40.53%), Postives = 112/190 (58.95%), Query Frame = 0 Query: 147 SAYDRW-HEGLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAG-FQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWVEG------GKVDGWVRGRMREVRRRYTYRSGASG 329 SA+ W H R L+A H DD HLYYNM S ++KG++LER +GS FL ++ A+++T+++ L L I ++ YTC+ GFS V+F+LK + P+G + V G F VP+ A W+EL+V L P+ASF GHL GI+ G+++V+G KV G R +RR YTY +G +G Sbjct: 59 SAHHVWFHGDWKRLILAAFYHLDDFHLYYNMASFVWKGMSLERRMGSSRFLYVLAVFTALTNTVLVALDI---ALANITEDYSYIYTCAAGFSGVIFALKVLTTYHLPSGVSMVMGMFPVPMRWACWVELIVIQLLVPHASFTGHLAGILVGMMYVKGPLKYFMDKVSGAGSVVTRGMRRSYTYHAGTTG 245
BLAST of NO03G00170 vs. NCBI_GenBank
Match: XP_013898532.1 (Uncharacterized protein MNEG_8447 [Monoraphidium neglectum] >KIY99512.1 Uncharacterized protein MNEG_8447 [Monoraphidium neglectum]) HSP 1 Score: 124.8 bits (312), Expect = 6.900e-25 Identity = 97/299 (32.44%), Postives = 133/299 (44.48%), Query Frame = 0 Query: 11 GRPRAQQGGGR-----RNNDLYLIYVLISTCLRHVSELDYKPPITIALLVINILVHILPELFLPWGIDFRSVRGICLQPARILEVLLPSLFAFFSIFDSSSXXXXXXXXGSSWAQRLWEAATGTAFTXXXXXXXXXXXXSPSAYDRWHEGLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFY--TCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWVEG 303 GRP G GR R D Y++ + + + + +++ KPP+T+AL+ N V+ L P +R CLQPA +L+ G W++ W SA VH D+ HLYYN+ SLL+KG LER LG F L +SH L++ + L P + Y TC+VGFSAVLF+ K V DPT ++SV GF +P +W ELV+ S +P ASF GHLCGI+AGV+ V G Sbjct: 4 GRPLPLPGRGRRAAYGRGIDAYVMLLFVQLA-QQIHQMENKPPVTLALMAANAGVYFRDLLPEPLQQLIPPLRRACLQPAAVLQ-------------------------GGQWSRLFW--------------------------------------SAWVHADEGHLYYNLSSLLWKGARLERRLGPARFAALTAELLLLSHGLVV---AGSWALAQAIPEYRGMYLSTCAVGFSAVLFAFKVVLNHDDPT-YSSVMGFTLPTKYMAWAELVLASAFNPQASFFGHLCGILAGVVHVRG 234
BLAST of NO03G00170 vs. NCBI_GenBank
Match: OWZ23667.1 (Serine protease [Phytophthora megakarya]) HSP 1 Score: 122.9 bits (307), Expect = 2.600e-24 Identity = 76/191 (39.79%), Postives = 106/191 (55.50%), Query Frame = 0 Query: 153 HEGLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWV-----------EGGKVDGWVRGRMREVRRRYTYRSGASGYHVP 333 H +R SAL+HGDD HLY+NM+S L+KG LE LGS FL V + + H L++++A L T +P + CSVGFS VLF+LK + P ++SV GFQVP A+W+ELVV FL P +SF GH+CGI+AG ++V + W++ + +T+ S A H P Sbjct: 75 HWDWTRIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMP---GPLHQCSVGFSGVLFALKVLLNHNSP-AYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSPAMQTAMSTGAHTISQWIKAIAGPISNLHTHHSDARTPHHP 261
BLAST of NO03G00170 vs. NCBI_GenBank
Match: XP_019646577.1 (PREDICTED: rhomboid-related protein 4-like [Branchiostoma belcheri]) HSP 1 Score: 122.5 bits (306), Expect = 3.400e-24 Identity = 81/204 (39.71%), Postives = 106/204 (51.96%), Query Frame = 0 Query: 152 WHEG-LSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLIL----LLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAG-FQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWVEGG-------KVDGWVRGRM---------REVRRR-YTYRSGASGYHVP 333 W++G R SA H D+ HLYYNM S ++KG+TLER LGS FL L+ +H+L+L + F H ++ C+VGFS V+F+LK + P G T V G F VP A W+ELVV L P ASF GHL GI+ G+L+ G GW R R R R++ YTY +GA+GY P Sbjct: 69 WYQGDWKRLIYSAFFHADEWHLYYNMASFMWKGITLERRLGSARFLYLLTVFTVCTHSLLLGLNYSMGHFFHQSSYLA-------DCAVGFSGVIFALKVLTTHYLPPGMTYVMGWFPVPRRIACWVELVVIQILIPRASFMGHLSGILVGLLYTSGPLRAIMDLPFGGWTRHRYYDDYGAPEPRHTRQQSYTYHAGATGYRAP 265
BLAST of NO03G00170 vs. NCBI_GenBank
Match: XP_002961035.2 (rhomboid-like protein 14, mitochondrial [Selaginella moellendorffii]) HSP 1 Score: 122.1 bits (305), Expect = 4.500e-24 Identity = 94/289 (32.53%), Postives = 132/289 (45.67%), Query Frame = 0 Query: 15 AQQGGGRRNNDLYLIYVLISTCLRHVSELDYKPPITIALLVINILVHILP---ELFLPWGIDFRSVRGICLQPARILEVLLPSLFAFFSIFDSSSXXXXXXXXGSSWAQRLWEAATGTAFTXXXXXXXXXXXXSPSAYDRWHEGLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWV 301 A + GGR N L ++ + + +L+ KPP+T AL++ N++V++ P LP S+ +CL P +L FD + R LSA H D+ HL+YNM+SLL+KGV LE +GSP F +V +SH L++LL + + TL P +TS C+VGFSA+LF+LK V P V GF VP A+W ELV+ P ASF GHL GI+AG+L+V Sbjct: 2 AGRRGGRSNGMLLMLALHV---FSQFVQLERKPPVTAALILANVIVYLRPGSLHEVLP------SIEEVCLSPYLVLR-----------NFD----------------------------------------------------VKRLLLSAFYHVDEAHLFYNMISLLWKGVQLEGRMGSPKFASMVALLLGMSHGLMVLLGTLVSTLTDSPAPYTS---CAVGFSALLFALKVVLNHNSPAN-AIVYGFVVPARFAAWAELVLVQMFMPGASFLGHLSGILAGLLYV 214
BLAST of NO03G00170 vs. NCBI_GenBank
Match: XP_002966977.2 (rhomboid-like protein 14, mitochondrial [Selaginella moellendorffii]) HSP 1 Score: 122.1 bits (305), Expect = 4.500e-24 Identity = 94/289 (32.53%), Postives = 132/289 (45.67%), Query Frame = 0 Query: 15 AQQGGGRRNNDLYLIYVLISTCLRHVSELDYKPPITIALLVINILVHILP---ELFLPWGIDFRSVRGICLQPARILEVLLPSLFAFFSIFDSSSXXXXXXXXGSSWAQRLWEAATGTAFTXXXXXXXXXXXXSPSAYDRWHEGLSRTYLSALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWV 301 A + GGR N L ++ + + +L+ KPP+T AL++ N++V++ P LP S+ +CL P +L FD + R LSA H D+ HL+YNM+SLL+KGV LE +GSP F +V +SH L++LL + + TL P +TS C+VGFSA+LF+LK V P V GF VP A+W ELV+ P ASF GHL GI+AG+L+V Sbjct: 2 AGRRGGRSNGMLLMLALHV---FSQFVQLERKPPVTAALILANVIVYLRPGSLHEVLP------SIEEVCLSPYLVLR-----------NFD----------------------------------------------------VKRLLLSAFYHVDEAHLFYNMISLLWKGVQLEGRMGSPKFASMVALLLGMSHGLMVLLGTLVSTLTDSPAPYTS---CAVGFSALLFALKVVLNHNSPAN-AIVYGFVVPARFAAWAELVLVQMFMPGASFLGHLSGILAGLLYV 214
BLAST of NO03G00170 vs. NCBI_GenBank
Match: CCI41808.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 121.7 bits (304), Expect = 5.800e-24 Identity = 68/139 (48.92%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 162 SALVHGDDVHLYYNMLSLLYKGVTLERALGSPLFLRLVLFSWAVSHTLILLLASFLHTLPFIPPSFTSFYTCSVGFSAVLFSLKYVAYSRDPTGWTSVAGFQVPLGKASWIELVVTSFLSPNASFAGHLCGIVAGVLWV 301 +A HGDD+HLY+NM+S L+KG LE +GS F ++ + VSH LI+L + + P ++T CS+GFSAVLF LK V S P TS+ GF VP A+W+ELV+ L PNASF GHLCGIVAG W+ Sbjct: 53 AAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYRFACVLAYLLLVSHGLIVLTSYLILKYQHNPHAWTQ---CSLGFSAVLFGLKVVLNSESP-NTTSIYGFHVPTKYAAWLELVLIHVLVPNASFLGHLCGIVAGYSWI 187 The following BLAST results are available for this feature:
BLAST of NO03G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00170 ID=NO03G00170|Name=NO03G00170|organism=Nannochloropsis oceanica|type=gene|length=1501bpback to top protein sequence of NO03G00170.1 >NO03G00170.1-protein ID=NO03G00170.1-protein|Name=NO03G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=452bpback to top Synonyms
Publications
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