NO03G00160, NO03G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00160 vs. NCBI_GenBank
Match: EWM29998.1 (ribosomal protein l19 [Nannochloropsis gaditana]) HSP 1 Score: 283.1 bits (723), Expect = 6.400e-73 Identity = 165/190 (86.84%), Postives = 173/190 (91.05%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARRAXXXXXXXXXXXXXXXAAGLAEKEEEK 191 MVNLRIQKRLAASVLKTGKRKVWLDPNET EISMANSRQN+RKLIKDGFV+KKPQV+HSRSR+ RLEAKRKGRHTGYGKRKGTANARLP K+VWLRR RVLRRLLRKYRDAKKVDKHLYHDLY R KGNQFKNKRVLME+IHK+KAEKAR+T LAAQS XXXXXXXXXXXXXXX GLAE EE K Sbjct: 31 MVNLRIQKRLAASVLKTGKRKVWLDPNETTEISMANSRQNVRKLIKDGFVLKKPQVIHSRSRYLTRLEAKRKGRHTGYGKRKGTANARLPMKIVWLRRTRVLRRLLRKYRDAKKVDKHLYHDLYQRAKGNQFKNKRVLMEAIHKMKAEKARLTQLAAQSXXXXXXXXXXXXXXXXXXXXXXGLAEAEEGK 220
BLAST of NO03G00160 vs. NCBI_GenBank
Match: XP_008608541.1 (50S ribosomal protein L19e [Saprolegnia diclina VS20] >EQC38214.1 50S ribosomal protein L19e [Saprolegnia diclina VS20]) HSP 1 Score: 258.5 bits (659), Expect = 1.700e-65 Identity = 129/163 (79.14%), Postives = 148/163 (90.80%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARR 164 MV+L++QKRLAASVLK GKRKVWLDPNE+ EI++ANSRQNIRKL+KDGFVI+KPQV+HSR+RF R EAKRKGRHTG GKR+GTANARLPFK++W+RRMRVLRRLLRKYRDAKK+D+H+YHDLYMR KGNQFKNKRVLME IHKLK+E R L QSEAR+ Sbjct: 36 MVSLKLQKRLAASVLKCGKRKVWLDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARK 198
BLAST of NO03G00160 vs. NCBI_GenBank
Match: XP_012205176.1 (60S ribosomal protein [Saprolegnia parasitica CBS 223.65] >XP_012210180.1 60S ribosomal protein [Saprolegnia parasitica CBS 223.65] >KDO19108.1 60S ribosomal protein [Saprolegnia parasitica CBS 223.65] >KDO24039.1 60S ribosomal protein [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 258.5 bits (659), Expect = 1.700e-65 Identity = 129/163 (79.14%), Postives = 148/163 (90.80%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARR 164 MV+L++QKRLAASVLK GKRKVWLDPNE+ EI++ANSRQNIRKL+KDGFVI+KPQV+HSR+RF R EAKRKGRHTG GKR+GTANARLPFK++W+RRMRVLRRLLRKYRDAKK+D+H+YHDLYMR KGNQFKNKRVLME IHKLK+E R L QSEAR+ Sbjct: 1 MVSLKLQKRLAASVLKCGKRKVWLDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARK 163
BLAST of NO03G00160 vs. NCBI_GenBank
Match: OQR86887.1 (60S ribosomal protein L19-1 [Achlya hypogyna]) HSP 1 Score: 258.5 bits (659), Expect = 1.700e-65 Identity = 129/163 (79.14%), Postives = 148/163 (90.80%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARR 164 MV+L++QKRLAASVLK GKRKVWLDPNE+ EI++ANSRQNIRKL+KDGFVI+KPQV+HSR+RF R EAKRKGRHTG GKR+GTANARLPFK++W+RRMRVLRRLLRKYRDAKK+D+H+YHDLYMR KGNQFKNKRVLME IHKLK+E R L QSEAR+ Sbjct: 1 MVSLKLQKRLAASVLKCGKRKVWLDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARK 163
BLAST of NO03G00160 vs. NCBI_GenBank
Match: OQR95014.1 (60S ribosomal protein L19-1 [Thraustotheca clavata]) HSP 1 Score: 258.5 bits (659), Expect = 1.700e-65 Identity = 129/163 (79.14%), Postives = 148/163 (90.80%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARR 164 MV+L++QKRLAASVLK GKRKVWLDPNE+ EI++ANSRQNIRKL+KDGFVI+KPQV+HSR+RF R EAKRKGRHTG GKR+GTANARLPFK++W+RRMRVLRRLLRKYRDAKK+D+H+YHDLYMR KGNQFKNKRVLME IHKLK+E R L QSEAR+ Sbjct: 1 MVSLKLQKRLAASVLKCGKRKVWLDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKTLKDQSEARK 163
BLAST of NO03G00160 vs. NCBI_GenBank
Match: CCI48260.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 256.9 bits (655), Expect = 4.900e-65 Identity = 128/161 (79.50%), Postives = 148/161 (91.93%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEA 162 MV+LR+QKRLAASVLK GKRK+WLDPNE+ EI++ANSR+NIRKL+KDGFVI+KPQV+HSR+RFQ R EAKRKGRHTG GKR+GTANARLPFK++W+RRMRVLRRLLRKYR+AKK+DK LYH+LYMR KGNQFKNKRVLME+IHKLKAE+ R L QSEA Sbjct: 1 MVSLRLQKRLAASVLKCGKRKIWLDPNESNEIALANSRENIRKLVKDGFVIRKPQVIHSRARFQKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYREAKKIDKFLYHELYMRSKGNQFKNKRVLMETIHKLKAERHREKTLREQSEA 161
BLAST of NO03G00160 vs. NCBI_GenBank
Match: CCA23564.1 (60S ribosomal protein L191 putative [Albugo laibachii Nc14]) HSP 1 Score: 256.1 bits (653), Expect = 8.300e-65 Identity = 127/160 (79.38%), Postives = 147/160 (91.88%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSE 161 MV+LR+QKRLAASVLK GKRK+WLDPNE+ EI++ANSR+NIRKL+KDGFVIKKPQV+HSR+RFQ R EAKRKGRHTG GKR+GTANARLPFK++W+RRMRVLRRLLRKYR+AKK+D+ LYHDLYMR KGNQFKNKRVLME+IHK+KAE+ R L QSE Sbjct: 1 MVSLRLQKRLAASVLKCGKRKIWLDPNESNEIALANSRENIRKLVKDGFVIKKPQVIHSRARFQKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYREAKKIDRFLYHDLYMRSKGNQFKNKRVLMETIHKMKAERHREKTLREQSE 160
BLAST of NO03G00160 vs. NCBI_GenBank
Match: XP_009039135.1 (hypothetical protein AURANDRAFT_6947, partial [Aureococcus anophagefferens] >EGB06185.1 hypothetical protein AURANDRAFT_6947, partial [Aureococcus anophagefferens]) HSP 1 Score: 254.6 bits (649), Expect = 2.400e-64 Identity = 130/164 (79.27%), Postives = 145/164 (88.41%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARRA 165 M +L +QKRLAASVLK GK +VW+DPNET EISMANSRQNIRKLIKDGFVI+KP VVHSRSR Q L+AKRKGRHTG GKRKGTANAR+P K++W+RR RVLRRLLRKYR+AKK+D HLYHDLYMR KGNQFKNKRVLMESIHKLK EKAR LA Q+EAR++ Sbjct: 1 MSSLSLQKRLAASVLKAGKNRVWMDPNETNEISMANSRQNIRKLIKDGFVIRKPVVVHSRSRCQRHLDAKRKGRHTGLGKRKGTANARMPMKVLWMRRQRVLRRLLRKYREAKKIDHHLYHDLYMRAKGNQFKNKRVLMESIHKLKGEKAREKALADQAEARKS 164
BLAST of NO03G00160 vs. NCBI_GenBank
Match: XP_006838023.1 (60S ribosomal protein L19-3 [Amborella trichopoda] >ERN00592.1 hypothetical protein AMTR_s00091p00066640 [Amborella trichopoda]) HSP 1 Score: 254.6 bits (649), Expect = 2.400e-64 Identity = 130/164 (79.27%), Postives = 147/164 (89.63%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARRA 165 MV+L++QKRLAASVLK GK KVWLDPNET EISMANSRQNIRKL+KDGFVIKKPQ +HSRSR + LEAKRKGRH+GYGKRKGT ARLP K++W+RRMRVLRRLLRKYR+AKK+DKH+YHD+YM+VKGN FKNKRVLMESIHK KAEKAR L+ Q EA+RA Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNETSEISMANSRQNIRKLVKDGFVIKKPQKIHSRSRARRALEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRA 164
BLAST of NO03G00160 vs. NCBI_GenBank
Match: XP_024397054.1 (60S ribosomal protein L19-3 isoform X1 [Physcomitrella patens] >PNR39064.1 hypothetical protein PHYPA_019342 [Physcomitrella patens]) HSP 1 Score: 254.2 bits (648), Expect = 3.200e-64 Identity = 129/164 (78.66%), Postives = 147/164 (89.63%), Query Frame = 0 Query: 1 MVNLRIQKRLAASVLKTGKRKVWLDPNETGEISMANSRQNIRKLIKDGFVIKKPQVVHSRSRFQARLEAKRKGRHTGYGKRKGTANARLPFKMVWLRRMRVLRRLLRKYRDAKKVDKHLYHDLYMRVKGNQFKNKRVLMESIHKLKAEKARVTMLAAQSEARRA 165 MV+L++QKRLAASVLK G+RKVWLDPNE EISMANSRQNIRKL+KDGFVI+KPQ +HSR+R + LEAKRKGRH+GYGKR+GT ARLP K++WLRRMRVLRRLLRKYRDAKK+DKH+YHD+YM+VKGN FKNKRVLMESIHK KAEKAR L+ Q EARRA Sbjct: 1 MVSLKLQKRLAASVLKCGERKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPQKIHSRARARRALEAKRKGRHSGYGKRRGTREARLPTKVLWLRRMRVLRRLLRKYRDAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEARRA 164 The following BLAST results are available for this feature:
BLAST of NO03G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00160 ID=NO03G00160|Name=NO03G00160|organism=Nannochloropsis oceanica|type=gene|length=4385bpback to top protein sequence of NO03G00160.1 >NO03G00160.1-protein ID=NO03G00160.1-protein|Name=NO03G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=191bpback to top Synonyms
Publications
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