NO03G00110, NO03G00110 (gene) Nannochloropsis oceanica

Overview
NameNO03G00110
Unique NameNO03G00110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length954
Alignment locationchr3:31497..32450 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:31497..32450 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO03G00110 vs. NCBI_GenBank
Match: XP_005853822.1 (hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >EKU22540.1 hypothetical protein NGA_0470400 [Nannochloropsis gaditana CCMP526] >EWM29990.1 hypothetical protein Naga_100276g6 [Nannochloropsis gaditana])

HSP 1 Score: 299.3 bits (765), Expect = 1.000e-77
Identity = 141/203 (69.46%), Postives = 169/203 (83.25%), Query Frame = 0
Query:   20 LPHLATALNA-VLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRVKSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVISVRDDCWAFNDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFNMTQAVDYGTERVKRVCRDAAIDCFVADVRDLDVVVGPDGLHPDDAGYRHLADRIWETKQEYNIP 222
            +P L+T +++ VL+GDSI+A  D   G+GAINKYLN+FSGQKL+NYA IGSSLHDG VKS+PQ+Y DMR +TAPAVP+TIVLNGGGNDVI+VRDDCWAFNDKC+ QID AM+IAE L+L MHDDGV+H+IYLGFYYAFNMT+AVDYG E +KRVC  A IDC VAD R+L +  G DG+HP D GY+ L+ RIWE K+  NIP
Sbjct:   20 VPVLSTGMSSTVLVGDSIMAGRDGVWGIGAINKYLNQFSGQKLDNYALIGSSLHDGWVKSVPQVYGDMRKKTAPAVPTTIVLNGGGNDVITVRDDCWAFNDKCRKQIDEAMDIAEKLLLCMHDDGVEHVIYLGFYYAFNMTEAVDYGMEGIKRVCEGAPIDCHVADARNLSIPTGWDGIHPLDEGYKRLSTRIWEVKEANNIP 222          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: EWM23185.1 (lipolytic protein g-d-s-l family [Nannochloropsis gaditana])

HSP 1 Score: 193.4 bits (490), Expect = 7.800e-46
Identity = 94/207 (45.41%), Postives = 135/207 (65.22%), Query Frame = 0
Query:   15 ATVLLLPHLATALNAVLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRVKSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVISVRDDCWAFNDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFNMTQAVDYGTERVKRVCRDAAIDCFVADVRDLDVVVGPDGLHPDDAGYRHLADRIWETKQEYNIP 222
            A+VL           V+IGDS+ A      G   +N +L E++G ++ N A +G+SLH+G  +SIP  Y ++       VP+TI+++GGGNDVIS R DC + +D C+LQID A+ I  DL+ +MH+DGV H+I++GF+Y   + +A DYGTE+V   C  A IDC +AD+RDL +  G DG+HP D GY+ LA+RIWE K E ++P
Sbjct:   93 ASVLFAAVPMAMARTVMIGDSMFA------GGSKVNNWLQEWAGHEIENIAIVGASLHEGWTESIPAEYAEL---DKTVVPTTIIMDGGGNDVISKRSDCESMDDACRLQIDEAVSIGSDLLEQMHEDGVAHVIWMGFFYIGGLEKAADYGTEKVAEACATAKIDCHLADLRDLQIPRGWDGVHPTDEGYKMLAERIWEVKLENHVP 290          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: XP_005853939.1 (lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526] >EKU22416.1 lipolytic protein g-d-s-l family [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 183.7 bits (465), Expect = 6.100e-43
Identity = 99/210 (47.14%), Postives = 136/210 (64.76%), Query Frame = 0
Query:   14 AATVLLLPHLATALNAVLIGDSILASSDTQGGLGAINKYLNEFSGQK--LNNYAKIGSSLHDGRVKSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVISVRDDCWAFNDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFNMTQAVDYGTERVKRVCRDAAIDCFVADVRDLDVVVGPDGLHPDDAGYRHLADRIWETKQEYNIP 222
            AAT+ LLP L      V+IGDS+ +++       A+   L  ++G    + N A +G+SLH+G V SIP  Y  M ++  P  P TIV++GGGNDVISV+DDC +FND+CQ QI  A +I  DL+ RMH+D VQH++ +G YY  N+ +AVD G + +  VC++A IDC +AD RDLD  +G DG+HP   GY  LA RIWE K + +IP
Sbjct:    6 AATLFLLPALCLG-RTVMIGDSMFSNN-------AVKNALEYYAGGNVTIENMALVGASLHEGWVPSIPAEYSIM-SKNPP--PITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIP 204          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: EWM26439.1 (hypothetical protein Naga_100344g3 [Nannochloropsis gaditana])

HSP 1 Score: 159.5 bits (402), Expect = 1.200e-35
Identity = 77/146 (52.74%), Postives = 101/146 (69.18%), Query Frame = 0
Query:   76 VKSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVISVRDDCWAFNDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFNMTQAVDYGTERVKRVCRDAAIDCFVADVRDLDVVVGPDGLHPDDAGYRHLADRIWETKQEYNIP 222
            V SIP  Y  M ++  P  P TIV++GGGNDVISV+DDC +FND+CQ QI  A +I  DL+ RMH+D VQH++ +G YY  N+ +AVD G + +  VC++A IDC +AD RDLD  +G DG+HP   GY  LA RIWE K + +IP
Sbjct:    7 VPSIPAEYSIM-SKNPP--PITIVMDGGGNDVISVKDDCLSFNDRCQQQIKEATDILADLLERMHEDKVQHVLLMGPYYLENLNKAVDEGFKLLSNVCKNATIDCHIADTRDLDPPLGDDGIHPIQEGYELLATRIWEIKLDNDIP 149          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: SMF04632.1 (Lysophospholipase L1 [Pseudobacteriovorax antillogorgiicola])

HSP 1 Score: 117.9 bits (294), Expect = 4.100e-23
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = 0
Query:   28 NAVLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRVKSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVISVRDDCWAFNDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYY----AFNMTQAVDYGTERVKRVCRDAAIDCFVADVRDLDVVVGP---DGLHPDDAGYRHLADRIWE 214
            + +++GDSI A +      G I + L   SGQ++ +YA+ G+ + D     + Q Y   R   A  +P T+++NGGGNDV+     C   N +C   I+ A++   DL+  M DDGV+ I+YLG+YY       +  A+DY   R+ ++C    + C V + R L    G    DG+HP   G R +AD IWE
Sbjct:   42 DTIILGDSIFALN------GEIERRLERNSGQRITSYARNGAEMDD-----VVQQYYRAR---ARGIPQTVIMNGGGNDVLGNITSCRFLNSRCVNAIEGAIDQGVDLIQLMEDDGVERIVYLGYYYTKFIGGGLDNAIDYAMARIPQICGATNLPCDVVETRRLMNGFGNRIIDGIHPTFRGSRKMADAIWE 220          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: WP_094059751.1 (SGNH/GDSL hydrolase family protein [Bacterioplanes sanyensis] >ASP38561.1 hypothetical protein CHH28_07680 [Bacterioplanes sanyensis])

HSP 1 Score: 100.1 bits (248), Expect = 8.900e-18
Identity = 65/212 (30.66%), Postives = 106/212 (50.00%), Query Frame = 0
Query:   30 VLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRV-KSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVI----------SVRDDCWAF---NDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFN-------MTQAVDYGTERVKRVCRDAAIDC-FV---ADVRDLDVVVGPDGLHPDDAGYRHLADRIWETKQ 217
            + +GDSI   S+       +   L +++G+    Y + G+ L  G V  S+ + Y   R+  A     T+V+NGGGND++          + +   + F   + +C+  ID       +L+  M  D V+H++YLG+YY  N       + +AVDYG   + R C +A +DC FV   A + D D+++  DG+HP  +G + LAD IW   Q
Sbjct:   34 ITLGDSIFDLSN------ELQLNLEDYAGETFRKYTRSGAELEGGLVAPSVIEQYAQARSDNADI--DTVVMNGGGNDILIPVLAMFDPYNCKTQWYQFGRLSTRCKNFIDDLYVDGVNLLNDMAGDNVEHVVYLGYYYTKNGVFPLDSLEEAVDYGNATLDRACANAVLDCQFVDPRASINDRDIIL--DGIHPASSGSKKLADLIWPVLQ 235          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: AJQ93980.1 (isopenicillin N synthase and related dioxygenase [Gynuella sunshinyii YC6258])

HSP 1 Score: 95.9 bits (237), Expect = 1.700e-16
Identity = 58/212 (27.36%), Postives = 107/212 (50.47%), Query Frame = 0
Query:   30 VLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRV-KSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVI---------SVRDDCWAF---NDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFN-------MTQAVDYGTERVKRVCRDAAIDCFVAD----VRDLDVVVGPDGLHPDDAGYRHLADRIWETKQE 218
            + IGDSI A S      G +   +  ++G+    Y   G+ L  G +  S+   Y   R   +      ++++GGGND++         + + + + F   +++C+ QID     A +L+ +M+ D V+++++LG+YY  N       M +A+DYG  R+ + C  + + C   D    + D D+++  DG+HP+ +G R LAD  W T ++
Sbjct:   77 ITIGDSIFALS------GELQDNIESYAGETFRRYTLSGAELSGGSIATSVVDQYYHARQDDSDI--DLVLMDGGGNDILIPAIMLDPYNCKTEWYQFGHLSEQCKAQIDDIYVEAVNLLNQMYADDVKNVVFLGYYYTKNAIFLLDSMEEAIDYGDMRLSQACEFSVVHCTFVDPRAVINDNDIII--DGIHPNHSGSRKLADLTWPTLKQ 278          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: WP_052830166.1 (SGNH/GDSL hydrolase family protein [Gynuella sunshinyii])

HSP 1 Score: 95.9 bits (237), Expect = 1.700e-16
Identity = 58/212 (27.36%), Postives = 107/212 (50.47%), Query Frame = 0
Query:   30 VLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRV-KSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVI---------SVRDDCWAF---NDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFN-------MTQAVDYGTERVKRVCRDAAIDCFVAD----VRDLDVVVGPDGLHPDDAGYRHLADRIWETKQE 218
            + IGDSI A S      G +   +  ++G+    Y   G+ L  G +  S+   Y   R   +      ++++GGGND++         + + + + F   +++C+ QID     A +L+ +M+ D V+++++LG+YY  N       M +A+DYG  R+ + C  + + C   D    + D D+++  DG+HP+ +G R LAD  W T ++
Sbjct:   56 ITIGDSIFALS------GELQDNIESYAGETFRRYTLSGAELSGGSIATSVVDQYYHARQDDSDI--DLVLMDGGGNDILIPAIMLDPYNCKTEWYQFGHLSEQCKAQIDDIYVEAVNLLNQMYADDVKNVVFLGYYYTKNAIFLLDSMEEAIDYGDMRLSQACEFSVVHCTFVDPRAVINDNDIII--DGIHPNHSGSRKLADLTWPTLKQ 257          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: WP_091811596.1 (SGNH/GDSL hydrolase family protein [Marinobacter mobilis] >SDW35142.1 GDSL-like Lipase/Acylhydrolase [Marinobacter mobilis])

HSP 1 Score: 92.4 bits (228), Expect = 1.900e-15
Identity = 74/229 (32.31%), Postives = 111/229 (48.47%), Query Frame = 0
Query:   14 AATVLLLPHLATALN--AVLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRV-KSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVISVRDDCWAFNDKCQ-LQIDSAMEIAEDLMLRMHDDGVQ-----------HIIYLGFYYAFN-------MTQAVDYGTERVKRVCRDAAIDCFVAD----VRDLDVVVGPDGLHPDDAGYRHLADRIWETKQ 217
            A  +L  P +  A N   + IGDSI A S      G +  +L + +GQ    Y   G+ L  G V  SI   YQ  R+   PA+  T+V++GGGND++        ++ K Q  +        +DL+  ++ DGV            H+IYLG+YY  N       M +AVDYG  R+ + C+ +A++C   D    + D D++   DG+HP+  G R LA+ IW   Q
Sbjct:   26 AGGLLSNPRVVDADNDQVITIGDSIFALS------GELQDFLEQDAGQTFRRYTLSGAELAGGAVATSIVDQYQIARSDN-PAI-DTVVMDGGGNDILIPAIMFDPYDCKTQWYEFGQLSRSCKDLINDIYVDGVNXXXXXXXXXXXHVIYLGYYYTKNGLFLLDSMEEAVDYGDTRLAQACQYSAVNCQFIDPRSAINDGDIIA--DGIHPNTTGSRKLANLIWPRLQ 244          
BLAST of NO03G00110 vs. NCBI_GenBank
Match: WP_072676490.1 (SGNH/GDSL hydrolase family protein [Marinobacter hydrocarbonoclasticus] >OJS99476.1 hypothetical protein BEE62_04890 [Marinobacter hydrocarbonoclasticus])

HSP 1 Score: 91.7 bits (226), Expect = 3.200e-15
Identity = 67/211 (31.75%), Postives = 99/211 (46.92%), Query Frame = 0
Query:   30 VLIGDSILASSDTQGGLGAINKYLNEFSGQKLNNYAKIGSSLHDGRV-KSIPQLYQDMRTQTAPAVPSTIVLNGGGNDVI---------SVRDDCWAF---NDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYLGFYYAFN-------MTQAVDYGTERVKRVCRDAAIDCFVAD----VRDLDVVVGPDGLHPDDAGYRHLADRIWETKQ 217
            V +GDSI A S      G I   L   +G+    Y   G+ L    +  SIP  +++  T   P +  TIV + GGND++         + +   W F   + +C+  ID     A D +  M + GVQ+ I  G+YY  N       M +AVDYG   + R C ++ +DC   D    + D D++   DG+HP D+G R +AD IW   Q
Sbjct:   54 VFVGDSIFALS------GEIQNQLEAKAGETFRRYTVSGAQLSGELIAPSIPNQFREAVTDN-PDI-KTIVGDAGGNDILIPAIAFNSNNCKTPWWRFGRLSQQCRDFIDDIYVEAVDFLNEMAEAGVQNGILTGYYYTKNGLFRLDDMKEAVDYGNATLARACENSVLDCTFVDPRWVINDRDIIF--DGIHPTDSGSRKIADLIWPKLQ 254          
The following BLAST results are available for this feature:
BLAST of NO03G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853822.11.000e-7769.46hypothetical protein NGA_0470400 [Nannochloropsis ... [more]
EWM23185.17.800e-4645.41lipolytic protein g-d-s-l family [Nannochloropsis ... [more]
XP_005853939.16.100e-4347.14lipolytic protein g-d-s-l family [Nannochloropsis ... [more]
EWM26439.11.200e-3552.74hypothetical protein Naga_100344g3 [Nannochloropsi... [more]
SMF04632.14.100e-2334.72Lysophospholipase L1 [Pseudobacteriovorax antillog... [more]
WP_094059751.18.900e-1830.66SGNH/GDSL hydrolase family protein [Bacterioplanes... [more]
AJQ93980.11.700e-1627.36isopenicillin N synthase and related dioxygenase [... [more]
WP_052830166.11.700e-1627.36SGNH/GDSL hydrolase family protein [Gynuella sunsh... [more]
WP_091811596.11.900e-1532.31SGNH/GDSL hydrolase family protein [Marinobacter m... [more]
WP_072676490.13.200e-1531.75SGNH/GDSL hydrolase family protein [Marinobacter h... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL071nonsL071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR084ncniR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR055ngnoR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005905NSK005905Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00110.1NO03G00110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611883gene_10294Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100276g6gene657Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00110.1NO03G00110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00110 ID=NO03G00110|Name=NO03G00110|organism=Nannochloropsis oceanica|type=gene|length=954bp
ATGCCTGTGACGTCCTGGAAGGTTGCAGTTACAGCATATGCTGCCACAGT
ACTCCTTCTTCCCCATCTGGCCACCGCCTTGAATGCTgtacgtacacttt
gaatggatgagtgggttgaccgggaggagggtgagggtctttattgagag
cgaggattgaaatctaatgctgataattttattccgaaagccattgctta
tacttcggtctcaccgcgtgaatgaaaatctgtttgattaatccttttcc
ctcgctctataccctacttctctttccctggaaagGTGCTTATTGGAGAT
TCGATATTGGCGAGCAGCGATACCCAAGGGGGACTGGGGGCGATTAATAA
GTACTTGAACGAGTTTTCCGGCCAGAAGCTCAATAATTACGCTAAGATCG
GCTCGAGTTTGCACGATGGGCGGGTGAAGAGCATTCCTCAATTGTACCAA
GACATGCGAACCCAGACGGCGCCTGCCGTACCCTCGACCATTGTGCTGAA
TGGAGGAGGCAACGACGTCATCTCTGTGCGAGATGACTGCTGGGCCTTCA
ATGATAAGTGCCAGCTTCAGATTGATAGTGCCATGGAAATCGCGGAGGAT
TTAATGTTGCGAATGCATGACGACGGGGTGCAGCACATTATTTACCTGGG
CTTTTACTACGCTTTCAACATGACCCAGGCGGTAGACTATGGCACCGAAA
GGGTCAAACGGGTGTGCAGAGATGCGGCTATTGATTGTTTCGTAGCGGAT
GTGCGGGACCTTGACGTCGTCGTCGGGCCGGATGGCTTGCACCCAGgtaa
ctatatatgtgtcgtgcacctcttctatccgcgaaggcctacatcactac
tcttcaacctcacgaatcgcctcacatctccagATGACGCAGGTTATCGT
CACTTAGCTGACCGTATTTGGGAGACAAAGCAGGAGTACAACATACCGTT
CTAG
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protein sequence of NO03G00110.1

>NO03G00110.1-protein ID=NO03G00110.1-protein|Name=NO03G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bp
MPVTSWKVAVTAYAATVLLLPHLATALNAVLIGDSILASSDTQGGLGAIN
KYLNEFSGQKLNNYAKIGSSLHDGRVKSIPQLYQDMRTQTAPAVPSTIVL
NGGGNDVISVRDDCWAFNDKCQLQIDSAMEIAEDLMLRMHDDGVQHIIYL
GFYYAFNMTQAVDYGTERVKRVCRDAAIDCFVADVRDLDVVVGPDGLHPD
DAGYRHLADRIWETKQEYNIPF*
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Synonyms
Publications