NO03G00080, NO03G00080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00080 vs. NCBI_GenBank
Match: XP_009033392.1 (hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens] >EGB12347.1 hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens]) HSP 1 Score: 131.7 bits (330), Expect = 5.500e-27 Identity = 93/333 (27.93%), Postives = 161/333 (48.35%), Query Frame = 0 Query: 61 FIKKILPQLVVGILLNLVVE-WSGLRETGWWAGRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAVLESCSVFIVTDE--GEHNNLY-------------------RNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYT----WILNAMLVVFIYSVPFLYESKRGGSYFGM------IILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDDTRDIS 362 F++++ P LV + +NLV+ L + + D + G VGAVL+ +LVFR+N++Y+RYYE +K G++TNQ R+ ++ + + ++ G N Y R +RR+ V++ +RQ++RE GF+P + P+++ T +I DP RPRL D+LTP EV Y V AR + + Q LA ++ + ++ +Q LD+ ++ RIV TP+P+ YT V + +++ ++ M I+ Y+G +IA + ENP + D D++ H +T I+ Sbjct: 23 FVQQLWPNLVTLVFVNLVINLLDHLGVKSMPSSQFDITQ--GLVGAVLSLLLVFRTNSAYERYYEGKKAYGVVTNQVRQIIMNAHAFLAFHEDASGHLNARYQPAAELRERAHEAEVVHELRERVRRQANVLLGVLRQDLREKRCGFVPECALHEVPYNKRT-WILDPSRPRLVDMLTPREVATYGTVSSGARVMLASHSLMDALQRLAPSLAQDRAFTECSTRNIQELLDAFKSCQRIVDTPLPFTYTXXXXXXXXXXXXXXXXXVAYWARTEKRLHWYSMSGILPSIVTAFFYYGVMQIAIEIENPFNFADVDHDLDGFADKLHSETLAIA 352
BLAST of NO03G00080 vs. NCBI_GenBank
Match: XP_005856043.1 (membrane protein, partial [Nannochloropsis gaditana CCMP526] >EKU20316.1 membrane protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 112.5 bits (280), Expect = 3.500e-21 Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = 0 Query: 100 HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAVLE----------------SCSVFIVTDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSK 260 HGF+G++L F + FR+NA+YDRYYE RK L +I R + + SCS V D+ + +++RR+ ++ AFIRQ++RES GF PNS F T Y+ DP P L DLL+ E E Y + P AR V++EI I Q+L+ + + + K Sbjct: 119 HGFIGSILGFSIAFRTNAAYDRYYEGRKILSIILENSRSILRDVYSFLLKAPAFPSPTSSCSSLPVPDDAA-VLVISSDLRRRLNILFAFIRQSVRESLSGFSPNSDMGTVSFSNSTFYL-DPSLPHLLDLLSKEEAERYAALSPRARPGAVSAEINIILQILSTRMLYADAFLCK 292
BLAST of NO03G00080 vs. NCBI_GenBank
Match: XP_003058502.1 (membrane protein [Micromonas pusilla CCMP1545] >EEH56957.1 membrane protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 100.5 bits (249), Expect = 1.400e-17 Identity = 88/339 (25.96%), Postives = 147/339 (43.36%), Query Frame = 0 Query: 37 ELAKQNFSFLRIIFCGRNGMGSFWFIKKILPQLVVGILLNLVVEW-SGLRETGWWAGRADTQRL-----HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAVLESCSVFI--------------------VTDEGEHNNLY--------RNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPI-RPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLYESK-RGGSYFGMIILVVAYFGCQRIAQQCENPLEW 340 EL+ F IF RN + + +LPQ+ V ++L L W G A+ + H V L F+LVFR++ +YDRYYE +++LG + + R L C V V G+ + R E+ R ++ A +R +R+ VG E P + + DP +P L DLL P E + + + PS R VA ++ I + R +I Q L+L L + + + RIV+TP+P+ Y +L +L F++S PF++ + R ++ I+ V ++G + + ++P W Sbjct: 558 ELSAHWTGFFSEIFTWRNTV-----MPSLLPQICVAVILGLFANWLKGFYCDPSVVAAAECETTFDITGHQVVSVSLGFLLVFRTDWAYDRYYEGKQSLGHLYSGLRN--LNVCFVNYLRANKPGEKPASELDGALRGVGRTGDEQDAAAARRIEEDRTELLRLTNILYATMRHILRDLRVG-----GEDGEPMTDEECVMSDPTGKPPLPDLLKPGEAKTLLAMMPSNRCNWVAMRVQMIVETHRRLGNISERAAFEIYQQLELCLGAYKAMERIVSTPIPFTYLHMLQFILFFFVFSAPFVFATTFRWIAWLPSAIVAVGFYGINEMGKLIQDPFNW 884
BLAST of NO03G00080 vs. NCBI_GenBank
Match: XP_002501798.1 (membrane protein [Micromonas commoda] >ACO63056.1 membrane protein [Micromonas commoda]) HSP 1 Score: 96.7 bits (239), Expect = 2.000e-16 Identity = 87/361 (24.10%), Postives = 162/361 (44.88%), Query Frame = 0 Query: 19 TQASSAKH------TEIPTVHYSSELAKQNFSFLRIIFCGRNGMGSFWFIKKILPQLVVGILLNLVVEWSGLRETGWWAGRAD----TQRLHGFVG--AVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAVLESCSVF-----IVTDEGEHNNLY-------------------RNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRD-PIRPRLCDLLTPS-EVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLYESK-RGGSYFGMIILVVAYFGCQRIAQQCENPLEWD 341 T+AS+ H + ++ EL+ +F+ IF + + + K++PQ+++ + L + G D T + G +G VL+F+LVFR++ +Y+RYY+ + LG I R + + + + D+G ++ R E+ R ++ AF+RQ +R G+ P + RD +PR+ D++ E++ + ++P R S+I I + R G + + QL LD+ ++ RIVTTP+PY Y +LN +L F+YSVPF++ + + + F ++ +A++G I + E+P W+ Sbjct: 81 TRASNGSHHGLGGPRRMVFLNKPKELSHGRLAFISEIFKIKGTI-----VLKVVPQIILAAFVGLFANLVKVLYCGEGVASNDECDVTFNMDGHLGVSVVLSFLLVFRADLAYERYYQGKSALGAIHTGIRNLNVATATFLRAHPPLSRDKGGKKSVINRRKWAAKNATRATALARDRMELFRLTNLLYAFVRQAVRAQRHGY-----SDVGPVTDDELMTRDRGGKPRVPDIVKDKIELDEFKTLEPWNRPNVCVSKITAIIEHHRRVGNLGERAALDVFRDCQLVLDALKSAERIVTTPIPYQYLHMLNILLFFFVYSVPFVFTANFKWITPFPSCVVALAFYGVNEIGRCMEDPYSWE 431
BLAST of NO03G00080 vs. NCBI_GenBank
Match: XP_007511540.1 (membrane protein [Bathycoccus prasinos] >CCO17661.1 membrane protein [Bathycoccus prasinos]) HSP 1 Score: 95.1 bits (235), Expect = 5.700e-16 Identity = 89/361 (24.65%), Postives = 147/361 (40.72%), Query Frame = 0 Query: 62 IKKILPQLVVGILLNLVVEWSGLRETG------WWAGRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAVLESCSVFIV---------------------------------------------TDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIR------PRLCDLL-TPSEVEGYVNVQPSARAACVASEIKGIAQ---LLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLYESKRGG-SYFGMIILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDDTRDI 361 I +LPQ+V+ L+ + ++ G A + H V VL+F+LVFR N +Y+++ EAR+ + + + R + CS T + + N R E+ R ++ AF R +RES +G+ + ++ GT + +R P L DLL P E+E +V+++P RA V +I I + L + E G L I + L +T RI TTP P Y +L +L F+YS PF + + + +L +A++G +A++ ENP W+A D+ L +D I Sbjct: 49 IPSVLPQMVLAFLIGIFANALKIQRCGENVMEDKECDVAFSVEGHTSVAVVLSFLLVFRVNLAYEKWDEAREAIERVRDGVRNLNVAFCSFVCTASSASFASIGDKDGDTVGASTDTXXXXXXXXXXXXXXXXXXXXXGTPQKDVNEDDRKELARLSQLLFAFFRIALRESRIGYSDDVQNADNSIGSGTISADEVVRYDRAGKPSLLDLLQDPVEIEAFVHLEPFNRANAVVQKILDIVEKRRRLGQVCERGAL---DIYRDCSGILAGVKTCERITTTPTPNKYAHMLTTLLFFFVYSAPFCFTATFDWLTPMPSALLAMAFYGVAEVAKKMENPFGWEAPSHDLSQLGAELFEDVARI 406
BLAST of NO03G00080 vs. NCBI_GenBank
Match: XP_003080714.2 (Bestrophin/UPF0187 [Ostreococcus tauri] >CEG01422.1 Bestrophin/UPF0187 [Ostreococcus tauri]) HSP 1 Score: 83.2 bits (204), Expect = 2.300e-12 Identity = 67/269 (24.91%), Postives = 119/269 (44.24%), Query Frame = 0 Query: 100 HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCR------EAVLESCSVFIVTDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIR-PRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLY-ESKRGGSYFGMIILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDDTRDI 361 H GA++ F L+FR SY RYY+ + LGL+ N R +L S + + + + EIRR V++ F+RQ IRE G P+S P + YI D P L LL+ E + Y AR AS+I I R ++ ++ + + T R++ + +P+ + ++N +L VF+ + PF++ S + + +++ + FG + ++P W D+ +++ +T I Sbjct: 797 HVMSGAIIGFTLIFRLALSYTRYYDGKGALGLMVNSIRCLNVGVSTMLRSSRINATPNVLKEVDEDAAEIRRLSNVLMGFMRQAIRERRHGVDPSSLTKKAPTTD--EYIEDMSGWPSLSLLLSDKEKDVYAKADYRARIGICASKIISIIDERRRLKHISDRSAYEMLGHVENCISACATAERLLASSMPFAFLHLMNFVLFVFVMTAPFVFVTSYKWLAPLPSMLVAASLFGIAEVGSLLDDPFGWSEPKHDLTKAGWASYTETLSI 1063
BLAST of NO03G00080 vs. NCBI_GenBank
Match: EWM20641.1 (Bestrophin/UPF0187 [Nannochloropsis gaditana]) HSP 1 Score: 83.2 bits (204), Expect = 2.300e-12 Identity = 49/175 (28.00%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 194 TPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIA-QLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLYESKRGG------SYFGMIILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDDTRDIS 362 T F++ T ++ DP RPRL DLLT EV+ + + ++R + +E+ +A ++L + E I Q L + R+ +P+PYT ++N + +F++ PF+Y S+ F ++L VA++G + +A++C++PL WD D D+E+ + + D ++++ Sbjct: 5 TKFNKDT-FVLDPTRPRLVDLLTEEEVQQFRRMPVNSRPVYLITEMNLLAYRILGLSKETSIRI--NIDNKFQEVLAGWNGMLRVENLRIPFPYTHVVNLLTFIFVFGAPFIYTSRTQNWAENDVLLFASLLLGVAFYGLEDMARKCQHPLGWDLEDHDLEIFGVRLNLDGQEMA 176
BLAST of NO03G00080 vs. NCBI_GenBank
Match: WP_067761724.1 (hypothetical protein [Niabella ginsenosidivorans] >ANH83768.1 hypothetical protein A8C56_07270 [Niabella ginsenosidivorans]) HSP 1 Score: 83.2 bits (204), Expect = 2.300e-12 Identity = 74/296 (25.00%), Postives = 129/296 (43.58%), Query Frame = 0 Query: 63 KKILPQLVVGILLN-----LVVEWSGLRETGWWAGRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAVLESCSVFIVTDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSS---ESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLYESKRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVE 348 +K+LP L++ L++ +E+ L E W + +H +G L+ +LVFR+N +YDR++EAR+ G +TN CR ++ + TD+G + +R I V+ F+R + + FM +S+ E + G N + I + L T ++ G QL+ N E +Q D RI TP+PY Y+ + +V+++ ++P + G YF + + ++ + IA+ ENP DA DL +E Sbjct: 23 RKLLPYLLLMALISWGIAYFELEYLKLSEKSW---LKNINMVHNLLGFALSLLLVFRTNTAYDRWWEARRQWGALTNVCRSMAIKLDAYLSKTDKGS-RHFFRKSIPLYSQVLSGFLRSD----YTTFMLDSAAHPELDLEQKHGPNQVASMIFRYVNGLYTDGKITG--------------------DQLIVINNE------------IQSLTDICGACERIKNTPIPYSYSSFIKKFIVLYVVTLPVGFVFSMG--YFVIAAVPFVFYVLASLELIAESIENPFGTDADDLPLE 276
BLAST of NO03G00080 vs. NCBI_GenBank
Match: OUS46902.1 (Bestrophin, RFP-TM, chloride channel-domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 82.8 bits (203), Expect = 3.000e-12 Identity = 67/269 (24.91%), Postives = 118/269 (43.87%), Query Frame = 0 Query: 100 HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCR------EAVLESCSVFIVTDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIR-PRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLY-ESKRGGSYFGMIILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDDTRDI 361 H GA++ F L+FR SY RYY+ + LGL+ N R +L S + + + EIRR V++ F+RQ IRE G P+S P + YI D P L LL+ E + Y AR AS+I I R ++ ++ + + T R++ + +P+ + ++N +L VF+ + PF++ S + + +++ + FG + ++P W D+ +++ +T I Sbjct: 850 HVMSGAIIGFTLIFRLALSYTRYYDGKGALGLMVNSIRCLNVGVSTMLRSSRINATPSVLKEVDEDAAEIRRLSNVLMGFMRQAIRERRHGVDPSSLTKKAPTTD--EYIEDMSGWPSLSLLLSDKEKDVYAKADYRARIGICASKIISIIDERRRLKHISDRSAYEMLGHVENCISACATAERLLASSMPFAFLHLMNFVLFVFVMTAPFVFVTSYKWLAPLPSMLVAASLFGIAEVGSLLDDPFGWSEPKHDLTKAGWASYTETLSI 1116
BLAST of NO03G00080 vs. NCBI_GenBank
Match: WP_013664626.1 (membrane protein [Sphingobacterium sp. 21] >ADZ77898.1 hypothetical protein Sph21_1335 [Sphingobacterium sp. 21]) HSP 1 Score: 81.6 bits (200), Expect = 6.600e-12 Identity = 74/302 (24.50%), Postives = 131/302 (43.38%), Query Frame = 0 Query: 62 IKKILPQLVV-----GILLNLVVEWSGLRETGWWAGRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAVLESCSVFIVTDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFH-----EGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFGFLYYSKISQCLQLSLDSQETLYRIVTTPVPYPYTWILNAMLVVFIYSVPFLYESKRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVELLT 351 IKK+ P L++ + L +E+ L E W + +H +G VL+ +LVFR+N +YDR++E RK G +TN R L S+ EG+ N R+ ++ + + +R++++ S FM + + H G N + I R L + G QL+ N E L ++ I + RI TP+P+ YT + + +++ ++P+ + G YF + +V A++ + IA++ E+P D DL +E +T Sbjct: 22 IKKLYPYLILMAIYAWAIAYLEIEYLKLSEKSW---LRNIPSMHSLLGFVLSILLVFRTNTAYDRWWEGRKLWGQLTNNSRNLALRIESLL---PEGDKGN--RSFYKKSIPLFASTLREHLQSSQTRFMLDEKDHPEFNHLDENKHGPNQVAAMIFKRTDTLYREGVISG--------------------DQLIILNAE--LLSFTDICGACE----------RIKNTPIPFTYTSFIKKFISIYVLTLPYGFVFSLG--YFVVPAVVFAFYVLTSLELIAEEIEDPFGTDVNDLPLEKMT 281 The following BLAST results are available for this feature:
BLAST of NO03G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00080 ID=NO03G00080|Name=NO03G00080|organism=Nannochloropsis oceanica|type=gene|length=2044bpback to top protein sequence of NO03G00080.1 >NO03G00080.1-protein ID=NO03G00080.1-protein|Name=NO03G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=446bpback to top Synonyms
Publications
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