NO03G00010, NO03G00010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00010 vs. NCBI_GenBank
Match: EWM29975.1 (hypothetical protein Naga_100383g4 [Nannochloropsis gaditana]) HSP 1 Score: 152.1 bits (383), Expect = 1.000e-32 Identity = 319/1193 (26.74%), Postives = 428/1193 (35.88%), Query Frame = 0 Query: 143 SSLHPAARLHHAAANVVFDRCLAYLQEH---TCTEGLFMLQASLTRVRQLQQRILTGEVAAEGEDDGPEDEGMEGKGGWWDNEQIISPRPFSPASSSPHEMATLLLQHLQVRPQPIIPSSLYSSLLACWRRIGESETGKENSGERDERNSGSVLVPAYNAERSAVEGPSKPEQELSETAPSQAPPVDGSTISSSSVPLDTVAEEEKG-------------------------KHVLRIFVDAFDESXXXXXXXXXXXXXXXXXXXXXRTLIALPQLARVIAQLPTQEWKQLESLLYLLRRVATSLTEAGPCLHDPTAAALGSV-----------------------------SLLQQH------CR----------------------------------RSSSPLKSPMP-AAAVCLQPTESNS----------FSSPSLDPA---------AAFVPGLASAGHFD-----------IQQLNHXXXXXXXXXXXXXXXXXXXXXXXXXXLHEQLMPALTTKLFSAQKENLLSLGPGLVSCLPAAAVVKLQSPCSMPHKQLRPKQQLQRLPSSPNTIATFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYTVSPHSPEFVPALFSHPLQDPTPPSSLLPLSLPSPFLSRADLLQ--GCQALRDKIATFEVRFKRGHGGRSPKGEERL--PLASTYHLYRQWKQVIRDRAVQVLQRMVRRWLARGRRKLARGKGGATAGPASVAADSLLASTPPVSEVGIV-----------SKSSHSIFAGKVNTTFSS--------------SPAAKQNPSD---------SLSSSSSLADSFRPSSELQALLEEKKKIKRRLKNFDASFQAKHGRTPSKKEKEPVRSIYEKYNCLKGRIAAFEQKDEKKXXXXXXXXXXXXXXXXXXXISSLTRPTLASASRTRMTAARRGIEKEEGGVGLPPQSPRRSGSPASSFALFSMRDQSKSLSRTSTMRISGSNKSCTDEMASASPSSPIAVASSGAWAFPSHVL-STPPPLPPPSSSCSINRTAPHLLFAQIPNIDGSL--AHSKISTASTSKQSTFGSPEVSCKRPGTRTALSSSFPPSALGLMSDVDLLILEKKRLHAHLRKFERAFQTKHGRRVQTAGDILPVDEEYTRYKRIKAQLAQLGVVGRREKGQER 1167 S L P ARLHH AA+++FDRCL YL++ TEGLFMLQ S+TRVR+LQ+R+ G G E Q + + P SSPHE+A LLLQHLQVRP P+IPSSLY++ L C + GES G + R G V V E A E + APS+ P+ S +S + D EE G K V + V A + +L ++ V+ +L ++W+QL SLL L+ +A + T G LH PT +ALG++ + + +H CR R +SP+++ P ++A P +S S P P A FV L A D QQ L E+LMP L+ +LFS + E+ LS GLV+C + C H + Q A SS XXX XXXXXXXXXXXXXXXX PH PP L PLS + DL Q G QAL V G P+ E ST R WK + ++RAV++LQR+ ++ R R++ A P A +A VSE + S S + VN T ++ PA S+ L S A S SSE QALL EKK++K RLK F+A+F HGR PS +KEP+R Y +YN LK +IA +K + R E GVG PR P + R+ SN+ AS W + S LPPPS P G L +S ++ + G S R + S S L SDV L EKK+LH LRKFE +F+ ++GRR+ TA DI PV+++Y RY IK++LA L ++ + E+ E+ Sbjct: 136 SPLEPGARLHHVAADIIFDRCLTYLRKDDGTMYTEGLFMLQPSMTRVRELQRRMSVGGGLEGASAWGAEXXXXXXXXXXXXRNQEETGKASPPVPSSPHEVAALLLQHLQVRPDPLIPSSLYAAWLGCQKVPGESARGGLGCSDGMARQDG-VSVHILGREGDAAEASRE------SAAPSERRPL--SPVSPNHALSDPHDEEAGGKWGDRWGDGGKENSWSAFYGADGVDKEVCEVEVAASCAARGAGEDPIPQPAGAPSGSTARGGGASLLRVKSVLCELTEKQWRQLGSLLDLMHALAKAPT-GGSDLHAPTVSALGAILGPVLSRPPGSAYLSIRHTRDVPALASLGATVVEHAPELLACRGEGEQLGGGSEAHEAGQGASVVGAEDRAEREAEERGASPVRAARPWSSATASSPGHRDSRDGHERAPRALSPPCSPPVSILLSHGGPALFVSPLGDAQQSDGLPSSHGSSPLPQQNAREVEHRLLQQAEHLDRQRQQVEAARAVLTERLMPGLSKRLFSERTEDRLSQASGLVACFE-------EDSCPSQHNSICRTQS--------GRSAQLSSEQQLFGAERSNPPLPASSDTPAPXXXLTVXXXXXXXXXXXXXXXXXXKCLPHG----------------PPVPLTPLS------QQLDLDQETGKQAL-------IVESSINGGEHEPRWREDTEGSNVSTQAQTRGWKAIEKNRAVKILQRLALTFVRRQRKRKHLTVKEQKAAPCEAARVIEVAPVLGVSEASLTVQALGPCCEARSSSPLAHPTSGVNQTCNAFTPEGDAWEAMRYWKPAIHTKTSNLEERKQVIPPLKHLLSKAASIPSSSEFQALLREKKRVKARLKKFNAAFLENHGRLPSMHDKEPMRRFYREYNLLKLQIAKALEKYQ----------------------------------------GNRQEESRGKGVGETSGRPRDGAQPET--------------------RVGESNEE----------------ASMTYWGIITPGKDSQRSGLPPPS-----------------PRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSD----SNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALMEKSEEISEQ 1177
BLAST of NO03G00010 vs. NCBI_GenBank
Match: GAX21645.1 (hypothetical protein FisN_29Hh082 [Fistulifera solaris]) HSP 1 Score: 87.4 bits (215), Expect = 3.200e-13 Identity = 86/245 (35.10%), Postives = 117/245 (47.76%), Query Frame = 0 Query: 665 TPPSSLLPLSLPSPFLSRADLLQGCQALRDKIATFEVRFKRGHGGRSPKGE-ERLPLASTYHLYRQWKQVIRDRAVQVLQRMVRRWLARGRRKLARGKGGATA-------GPASVAADSLLASTP---PVSEVGIVSKSSHSIFAGKVNTTFSSSP-------AAKQNPSDSLSSSSSLADSFRPSSELQALLEEKKKIKRRLKNFDASFQAKHGRTPSKKEKEPVRSIYEKYNCLKGRIAAFEQ 892 TP + +L S R + C+ALR +I FE F + H GR PKG ER PLASTY YR+WK+ IR A +Q ++R AR R L + G S A+ S P +E+G SS + K+ FS P A ++ S S S ++S+ S L L K+ +KR+L+ +D F +HGR P K EKEP+R +YE YN LK +I EQ Sbjct: 657 TPSGAANYRTLTSTAAERKRTVAACRALRAQIQRFEDAFFQLH-GRPPKGNAERAPLASTYAQYREWKRAIRADAACRIQALIRG--ARTRSMLLNNNASTFSTIVAKRPGRTSYASTIDQISMPADLDSNEMG----SSSPLAPAKIGLPFSLDPDWGYTTVANDRHLVGSQSDSGFTSESYSGFS-LDELQARKRDMKRQLRQYDMDFARRHGRMPVKAEKEPIRHLYESYNALKSQITQMEQ 893
BLAST of NO03G00010 vs. NCBI_GenBank
Match: OEU18608.1 (hypothetical protein FRACYDRAFT_236886 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 83.6 bits (205), Expect = 4.600e-12 Identity = 88/264 (33.33%), Postives = 118/264 (44.70%), Query Frame = 0 Query: 675 LPSPFLSRADLLQGCQALRDKIATFEVRFKRGHGGRSPKGE-ERLPLASTYHLYRQWKQVIRDRAVQVLQRMVR----RW-LARGRR----KLARGKGGATA-------GPASVAADSLLASTPPVSEVGIVSKSSHSIFAGKVNTTFS-------------------------------SSPAAKQNPSDSLSSSSSLADSFRPSSELQALLEEKKKIKRRLKNFDASFQAKHGRTPSKKEKEPVRSIYEKYNCLKGRIAAFE 891 L S R + C+ALR +I FE F + H GR PKG ER PLA+TY YR+WK+ IR A +Q + R RW L RG K+ R + G P+ SLL +E+G S+F+ N S +SP +P +S S +SL+ ELQAL K+ +K++LK +D SF +HGR P K EKEP+R +YE+YN LK I E Sbjct: 873 LTSTAAERRRTVAACRALRAQITRFEDAFVQLH-GRPPKGAVERSPLATTYAQYREWKRAIRADAACRIQALFRGASTRWMLLRGNNPEISKVVRTRAGRRGFALQNDLTPSPGGQISLLEELSIPAEIG--DNIQESVFSPNANVQGSNQTLVPQWGDQIHRRRTGSNDFNSAAPIPRPASPVVSASPRNSGGSLNSLS-----LPELQAL---KRDLKQQLKKYDMSFARRHGRMPVKAEKEPIRHLYERYNALKTHIGDME 1125
BLAST of NO03G00010 vs. NCBI_GenBank
Match: XP_002178661.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50326.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 79.3 bits (194), Expect = 8.600e-11 Identity = 80/254 (31.50%), Postives = 112/254 (44.09%), Query Frame = 0 Query: 675 LPSPFLSRADLLQGCQALRDKIATFEVRFKRGHGGRSPKGE-ERLPLASTYHLYRQWKQVIRDRAVQVLQRMVRRW-----LARGRRK-----LARGKGGATAGPASVAADSLLASTPPVSEVGIVSKSSHSIFAGKVNTTFSSSPAAKQ-----NPSDSLSSSSSLADSFRPSSELQA-----------------LLEEKKKIKRRLKNFDASFQAKHGRTPSKKEKEPVRSIYEKYNCLKGRIAAFEQKDEK 896 L S R + C+ALR +I FE F + H GRSPKG ER PL +TY YR+WK+ IR A +Q + R + L +G R ++R G + + S + + P + S + S+F A+KQ N D S SL+ S S+ L L K+ +K +LK +D F KHGR P K EKEP+R +YE YN LK +I E + + Sbjct: 877 LTSTAAERKRTVAACRALRAQIQRFEDAFLQLH-GRSPKGAVERAPLTTTYAQYREWKRAIRADAASRIQALFRGFRTRTLLLQGNRPEILRVVSRRAGRSDFTLPDLNLPSDIGDSEPTGSL-TSSTENESLFETSEKQPSGLQWASKQLRPRANSGDRSGSPGSLSSSKSQSATLSTVPSALTIQELKGMTLPELQARKRDLKSQLKQYDMHFARKHGRMPIKAEKEPIRHLYESYNFLKTQITTLEHEQRR 1128
BLAST of NO03G00010 vs. NCBI_GenBank
Match: GAX14870.1 (hypothetical protein FisN_29Lh082 [Fistulifera solaris]) HSP 1 Score: 78.2 bits (191), Expect = 1.900e-10 Identity = 123/505 (24.36%), Postives = 173/505 (34.26%), Query Frame = 0 Query: 665 TPPSSLLPLSLPSPFLSRADLLQGCQALRDKIATFEVRFKRGHGGRSPKGE-ERLPLASTYHLYRQWKQVIRDRAVQVLQRMVRRWLARGRRKLARGKGGATA-------GPASVAADSLLASTPPVSEVGIVSKSSHSIFAGKVNTTFSSSP-------AAKQNPSDSLSSSSSLADSFRPSSELQALLEEKKKIKRRLKNFDASFQAKHGRTPSKKEKEPVRSIYEKYNCLKGRIAAFEQKDEKKXXXXXXXXXXXXXXXXXXXISSLTRPTLASASRTRMTAARRGIEKEEGGVGLPPQSPRRSGSPASSFALFSMRDQSKSLSRTSTMRISGSNKSCTDEMASASPSSPIAVASSGAWAFPSHVLSTPPPLPPPSSSCSINRTAPHLLFAQIPNIDGSLAHSKISTASTSKQSTFGSPEVSCKRPGTRTALSSSFPPSALGLMSDVDLLILEKKRLHAHLRKFERAFQTKHGRRVQTAGDILPVDEEYTRYKRIKAQLAQL 1155 TP + +L S R + C+ALR +I FE F + H GR PKG ER PLASTY YR+WK+ IR A +Q ++R AR R L + G S A+ S P + + SS + K+ FS P + ++ S + S ++SF S L L K+ +KR+L+ +D F +HGR P K EKEP+R +YE YN LK +I EQ S+S S S +S ++ E + P P+ + PLPP +++ T +++ L EK LH LR +ER F KHGR+V + DI PV +Y RYK IK +A L Sbjct: 734 TPSGAAHYRTLTSTAAERKRTVAACRALRAQIQRFEDAFFQLH-GRPPKGNAERAPLASTYAQYREWKRAIRADAACRIQALIRG--ARTRSMLLNSNASTFSTIVAKRPGRTSYASSIDQISMPADLDSNDMGSSS-PLAPAKIGLPFSLDPDWGNTTVSNDRHLVSSQTESGFTSESFSGFS-LDELQARKRDLKRQLRQYDMDFARRHGRMPVKAEKEPIRHLYESYNALKSQITQMEQDSR----------------------------------------------------------------------------SSQSASAVSRSHVSSEVQTMASESVNEEPRGQERQR-------PNIIKRVSEPLPPSEPMTNVSPT------------------------------------------------------------QNLNSLRAEKAELHQMLRSYERDFYEKHGRQVSSFSDIRPVASQYRRYKEIKRAIAAL 1090
BLAST of NO03G00010 vs. NCBI_GenBank
Match: XP_002293390.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89126.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 76.6 bits (187), Expect = 5.600e-10 Identity = 82/269 (30.48%), Postives = 121/269 (44.98%), Query Frame = 0 Query: 674 SLPSPFLSRADLLQGCQALRDKIATFEVRFKRGHGGRSPKG-EERLPLASTYHLYRQWKQVIRDRA---VQVLQR-------MVRRWLARGRRKLARGKGGAT-----AGPASVAADSLLASTPPVSE----------------------VGIVSKSSHSIFAGKVNTTFSSSPAAKQNPSDSLSSSSSLADSFRPS-------------SELQALLEEKKKIKRRLKNFDASFQAKHGRTPSKKEKEPVRSIYEKYNCLKGRIAAFEQ 892 +L S R + C+ALR +I FE F + H GR+PKG ER PLASTY YR+WK+ IR A +Q L R M+R R R ++R T S + L T PV V +V +S + + + + + + +Q S S + + RPS L L + K+++K++LK +D +F A+HGR P K+EKEP+R +YE YN K +I+A E+ Sbjct: 729 ALTSTAAERKRTVAACRALRAQITKFEEAFIQMH-GRAPKGAAEREPLASTYMQYREWKRAIRTDAACRIQALCRGSSVRSMMLRSHDVRVSRIVSRRSVKPTLVERRTSDLSHLSIPLDIGTNPVQSSILDHVAKTRLEARGGLRGDDGVEVVMRSGSATTSSAIPPSVAPNWKNRQQVGHSGGDSPGSSFNQRPSPGKPRNSQPDVTVMSLPELQQRKRELKQQLKMYDLNFHAQHGRMPEKREKEPIRHLYESYNAYKNQISAIEK 996 The following BLAST results are available for this feature:
BLAST of NO03G00010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00010 ID=NO03G00010|Name=NO03G00010|organism=Nannochloropsis oceanica|type=gene|length=3824bpback to top protein sequence of NO03G00010.1 >NO03G00010.1-protein ID=NO03G00010.1-protein|Name=NO03G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1173bpback to top Synonyms
Publications
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