NO02G06210, NO02G06210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G06210 vs. NCBI_GenBank
Match: CBJ28183.1 (flagellar associated protein [Ectocarpus siliculosus]) HSP 1 Score: 213.4 bits (542), Expect = 2.200e-51 Identity = 107/232 (46.12%), Postives = 150/232 (64.66%), Query Frame = 0 Query: 408 VEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALK 640 +EGAYDP +YA++ ++ +++++ ++ RY+ H+ +L+T L+CF+PDF PAVGD+D FLK+PRPD DELG KV+DEPA QSD T+LELQL A+SK K V VR I++A K P E+D+WI+S++ LHR+ PP Y K MPD++ LM+AWP V LL P LD+ L +YA+ CA+ IPVY+N ++ESLH LFT F+ K Sbjct: 215 IEGAYDPADYAHL--NVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDQNPDELGFKVLDEPAANQSDATVLELQLRAISK----KQYGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEFEEIVGNV--------------NLLTPELDMPLEDYARMVCAVMDIPVYDN---IIESLHILFTTFMEFK 423
BLAST of NO02G06210 vs. NCBI_GenBank
Match: OWZ09688.1 (hypothetical protein PHMEG_00017566 [Phytophthora megakarya]) HSP 1 Score: 198.4 bits (503), Expect = 7.300e-47 Identity = 112/265 (42.26%), Postives = 163/265 (61.51%), Query Frame = 0 Query: 389 HPASGIGERAP-----TSTGAGGH------VEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKERE 643 HPAS + A S GA + GAY +YA++ + ++RE+ ++ R++ + ELET LKCFIP++ PAVGD+D FLK+PRPDG AD+LG K++DEP+ QSD T+L+LQL + SK +K ++V VR I++A K PRE+DRWI+S++ LHR+ PP Y+K MPD++ LMQ WP ++ K+++ AD LD+ L +Y + CAL IPV++N + ESLH LFTLFL + + Sbjct: 199 HPASSVTPHASNPGAVASIGASSNHAAMMANAGAYKESDYAHL--KVSHEIRELFQYIGRFKAQEIELETRLKCFIPEYIPAVGDMDAFLKVPRPDGQADQLGLKMLDEPSLNQSDATVLDLQLRSTSK---KKHGDIV-VRSIENAEKAPREIDRWIKSIADLHRTKPPPQVHYTKTMPDIESLMQVWPEEFEELLS----KTTLPSAD----------LDMGLEQYVRIVCALLDIPVHKN---VYESLHVLFTLFLEFRSNQ 440
BLAST of NO02G06210 vs. NCBI_GenBank
Match: PIK40433.1 (hypothetical protein BSL78_22716, partial [Apostichopus japonicus]) HSP 1 Score: 198.0 bits (502), Expect = 9.500e-47 Identity = 106/240 (44.17%), Postives = 150/240 (62.50%), Query Frame = 0 Query: 405 GGHVEGAYDPEEYAYMLPSLPL--DVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKERE 643 G VEGAYDP EY +LP+ +++E+ ++TRY P ELE LK FIPD+ PAVGDID F+K+ RPDG D LG V+DEP +QSDPT+L+LQL A+SK KA +QVR I++A+K+P+ ++ W+ES+S LHRS PP Y+K MPD+D LMQ WP + K + AD +D +L +Y + CA+ IP+Y+++ +++LH LFTL+ K + Sbjct: 25 GRGVEGAYDPAEY----ENLPVSSEIKELFQYITRYTPQTIELEYKLKPFIPDYIPAVGDIDAFIKINRPDGQGDSLGLTVLDEPCAKQSDPTVLDLQLRAISKQTTSKA---MQVRSIENASKQPKLINNWVESISELHRSKPPPTVHYTKTMPDIDTLMQEWPGEFEDLL----NKIGIPSAD----------IDCTLDQYVEMICAVLDIPIYQSK---IQALHVLFTLYSEFKNSQ 240
BLAST of NO02G06210 vs. NCBI_GenBank
Match: XP_023707469.1 (intraflagellar transport protein 46 homolog isoform X2 [Cryptotermes secundus] >PNF44163.1 Intraflagellar transport protein 46-like protein [Cryptotermes secundus]) HSP 1 Score: 197.6 bits (501), Expect = 1.200e-46 Identity = 107/242 (44.21%), Postives = 148/242 (61.16%), Query Frame = 0 Query: 408 VEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKEREQPPAFPE 650 +EG YDP E++++ + +V+++ +TRY P + EL+ L+ FIPDF PAVGDID FLK+PRPDG +D +G V+DEP +QS+P +L LQL A++K KA V V+ +D A K + +DRWI+ +S LHRS PP YSKPMPD+D LMQ WPA V + +T LP LD +L Y C+LF IPVYE+ ++SLH LF L+ A+K + + PE Sbjct: 75 LEGTYDPNEFSHL--PVSAEVKDMFQNITRYTPQNMELDYKLRPFIPDFIPAVGDIDAFLKIPRPDGKSDSIGLTVLDEPCAKQSEPAVLHLQLRAVAKQSSAKA---VVVKKVDCAEKNTKAIDRWIKDISDLHRSKPPPTVHYSKPMPDIDSLMQEWPADVEQQL-----------QETGLP---VADLDCALPRYVDIVCSLFDIPVYESR---IQSLHVLFMLYSAVKSSQYISSRPE 294
BLAST of NO02G06210 vs. NCBI_GenBank
Match: XP_023706679.1 (intraflagellar transport protein 46 homolog isoform X1 [Cryptotermes secundus] >PNF44162.1 Intraflagellar transport protein 46-like protein [Cryptotermes secundus]) HSP 1 Score: 197.6 bits (501), Expect = 1.200e-46 Identity = 107/242 (44.21%), Postives = 148/242 (61.16%), Query Frame = 0 Query: 408 VEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKEREQPPAFPE 650 +EG YDP E++++ + +V+++ +TRY P + EL+ L+ FIPDF PAVGDID FLK+PRPDG +D +G V+DEP +QS+P +L LQL A++K KA V V+ +D A K + +DRWI+ +S LHRS PP YSKPMPD+D LMQ WPA V + +T LP LD +L Y C+LF IPVYE+ ++SLH LF L+ A+K + + PE Sbjct: 119 LEGTYDPNEFSHL--PVSAEVKDMFQNITRYTPQNMELDYKLRPFIPDFIPAVGDIDAFLKIPRPDGKSDSIGLTVLDEPCAKQSEPAVLHLQLRAVAKQSSAKA---VVVKKVDCAEKNTKAIDRWIKDISDLHRSKPPPTVHYSKPMPDIDSLMQEWPADVEQQL-----------QETGLP---VADLDCALPRYVDIVCSLFDIPVYESR---IQSLHVLFMLYSAVKSSQYISSRPE 338
BLAST of NO02G06210 vs. NCBI_GenBank
Match: XP_002732952.1 (PREDICTED: intraflagellar transport protein 46 homolog isoform X1 [Saccoglossus kowalevskii]) HSP 1 Score: 196.8 bits (499), Expect = 2.100e-46 Identity = 110/238 (46.22%), Postives = 144/238 (60.50%), Query Frame = 0 Query: 405 GGHVEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKERE 643 G +EGAYDP +Y + LP P D++E+ ++TRY P ELE LK FIPDF PAVGDID FLK+ PDG LG V+DEP RQSDPT+L+LQL A+SK K+ VQVR I++A K P+ V WI+S++ LHRS PP Y+K MPD+D LMQ WPA + K + AD LD L EY + C + IP+Y+++ ++SLH LFTL+ K + Sbjct: 119 GVALEGAYDPADYEH-LPVQP-DIKELFQYITRYTPQSIELEHKLKPFIPDFIPAVGDIDAFLKISEPDGKPSTLGLIVLDEPCARQSDPTVLDLQLRAISKQTTTKS---VQVRSIEEADKHPKSVQSWIDSINDLHRSKPPPTVQYNKTMPDIDSLMQEWPAEFEDLL----NKVGLPTAD----------LDCDLSEYVEMICGILDIPIYKSK---IQSLHVLFTLYSEFKNSQ 334
BLAST of NO02G06210 vs. NCBI_GenBank
Match: XP_006814222.1 (PREDICTED: intraflagellar transport protein 46 homolog isoform X2 [Saccoglossus kowalevskii]) HSP 1 Score: 196.8 bits (499), Expect = 2.100e-46 Identity = 110/238 (46.22%), Postives = 144/238 (60.50%), Query Frame = 0 Query: 405 GGHVEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKERE 643 G +EGAYDP +Y + LP P D++E+ ++TRY P ELE LK FIPDF PAVGDID FLK+ PDG LG V+DEP RQSDPT+L+LQL A+SK K+ VQVR I++A K P+ V WI+S++ LHRS PP Y+K MPD+D LMQ WPA + K + AD LD L EY + C + IP+Y+++ ++SLH LFTL+ K + Sbjct: 141 GVALEGAYDPADYEH-LPVQP-DIKELFQYITRYTPQSIELEHKLKPFIPDFIPAVGDIDAFLKISEPDGKPSTLGLIVLDEPCARQSDPTVLDLQLRAISKQTTTKS---VQVRSIEEADKHPKSVQSWIDSINDLHRSKPPPTVQYNKTMPDIDSLMQEWPAEFEDLL----NKVGLPTAD----------LDCDLSEYVEMICGILDIPIYKSK---IQSLHVLFTLYSEFKNSQ 356
BLAST of NO02G06210 vs. NCBI_GenBank
Match: XP_006814223.1 (PREDICTED: intraflagellar transport protein 46 homolog isoform X3 [Saccoglossus kowalevskii]) HSP 1 Score: 196.8 bits (499), Expect = 2.100e-46 Identity = 110/238 (46.22%), Postives = 144/238 (60.50%), Query Frame = 0 Query: 405 GGHVEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKERE 643 G +EGAYDP +Y + LP P D++E+ ++TRY P ELE LK FIPDF PAVGDID FLK+ PDG LG V+DEP RQSDPT+L+LQL A+SK K+ VQVR I++A K P+ V WI+S++ LHRS PP Y+K MPD+D LMQ WPA + K + AD LD L EY + C + IP+Y+++ ++SLH LFTL+ K + Sbjct: 130 GVALEGAYDPADYEH-LPVQP-DIKELFQYITRYTPQSIELEHKLKPFIPDFIPAVGDIDAFLKISEPDGKPSTLGLIVLDEPCARQSDPTVLDLQLRAISKQTTTKS---VQVRSIEEADKHPKSVQSWIDSINDLHRSKPPPTVQYNKTMPDIDSLMQEWPAEFEDLL----NKVGLPTAD----------LDCDLSEYVEMICGILDIPIYKSK---IQSLHVLFTLYSEFKNSQ 345
BLAST of NO02G06210 vs. NCBI_GenBank
Match: XP_002899324.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY62293.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 196.1 bits (497), Expect = 3.600e-46 Identity = 103/233 (44.21%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 410 GAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKERE 643 G Y +YA++ + ++RE+ ++ R++ + ELET LKCFIP+F PAVGD+D FLK+PRPDG D+LG K++DEP+ QSD T+L+LQL + SK +K ++V VR I++A K PRE+DRWI+S++ LHR+ PP Y+K MPD++ LMQ WP + K+++ GAD LD+ L +Y + CAL IPV++N + ESLH LFTL+L + Sbjct: 296 GGYKESDYAHL--KVSHEIRELFQYIGRFKAQEIELETRLKCFIPEFIPAVGDMDAFLKVPRPDGQPDQLGLKMLDEPSLTQSDATVLDLQLRSTSK---KKHGDIV-VRSIENAEKSPREIDRWIKSIADLHRTKPPPQVHYTKTMPDIESLMQVWPEEFEELLG----KTTLPGAD----------LDMGLEQYVRVICALLDIPVHKN---VYESLHVLFTLYLEFSSNQ 505
BLAST of NO02G06210 vs. NCBI_GenBank
Match: GBG31093.1 (Intraflagellar transport protein 46-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 196.1 bits (497), Expect = 3.600e-46 Identity = 101/238 (42.44%), Postives = 147/238 (61.76%), Query Frame = 0 Query: 403 GAGGHVEGAYDPEEYAYMLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKMPRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGRKAEELVQVRGIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDVDRLMQAWPAPVHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYENENGLLESLHALFTLFLALKE 641 G G EG +DP EY ++ + +V+E+ ++ RY+PHD EL+T L+CFIPD+ PAVGDID F+K+PRPD D+LG KV+DEP+ QSD T+L+LQL A+SK + + + VR I++A K P+ + W++S+ LHRS PP Y+K MPD++ LMQ WP V + K S+ +DL L +YA+ CA+ IPV+ N ++E LH LFTL+ ++ Sbjct: 272 GQGSGFEG-FDPREYDHL--DVSNEVKELFQYIVRYKPHDIELDTKLRCFIPDYIPAVGDIDAFVKIPRPDREQDDLGLKVLDEPSATQSDATVLDLQLRAMSK---KSVKNPMIVRSIENADKDPKAIQNWMDSIKDLHRSKPPPQVHYTKQMPDIESLMQVWPEQVEQLMKEIKLPSA--------------DIDLDLKDYARVVCAILDIPVF---NNMIEPLHVLFTLYSEFRD 486 The following BLAST results are available for this feature:
BLAST of NO02G06210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G06210 ID=NO02G06210|Name=NO02G06210|organism=Nannochloropsis oceanica|type=gene|length=4286bpback to top protein sequence of NO02G06210.1 >NO02G06210.1-protein ID=NO02G06210.1-protein|Name=NO02G06210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=673bpback to top Synonyms
Publications
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