NO02G06050, NO02G06050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G06050 vs. NCBI_GenBank
Match: EWM30072.1 (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 246.5 bits (628), Expect = 2.000e-61 Identity = 112/129 (86.82%), Postives = 117/129 (90.70%), Query Frame = 0 Query: 145 HDPNKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQRHFRPFLGPPVALHMYAA 274 HDPNKRHTWT EEDRRLKELV TVGP+KWGIISTHF NRNAKQCHQRWHYVLKP ITREPWTEEED AIMQYQIQIGNKWS IAK+L GRTGYAIRNRYNFL KR LEE QRHFRPFLGPP++LH+ A Sbjct: 2 HDPNKRHTWTGEEDRRLKELVRTVGPRKWGIISTHFKNRNAKQCHQRWHYVLKPSITREPWTEEEDNAIMQYQIQIGNKWSQIAKFLHGRTGYAIRNRYNFLSKRQLEEAQRHFRPFLGPPLSLHIQPA 130
BLAST of NO02G06050 vs. NCBI_GenBank
Match: EWM24723.1 (myb family transcription factor [Nannochloropsis gaditana]) HSP 1 Score: 155.6 bits (392), Expect = 4.600e-34 Identity = 75/127 (59.06%), Postives = 89/127 (70.08%), Query Frame = 0 Query: 130 HHRHAQLSHGGH--PSP------HDPNKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQK 249 H++ A + H P P D KR+TWT +ED+ L LV GPKKWGI++T+ RNAKQCHQRWHYVLKP I+RE WTE+ED I YQ +GNKWSHIAKYLSGRTGYA+RNR+ FL K Sbjct: 1253 HNKKASVFHAVKHLPGPLMGLAMEDDGKRNTWTADEDKILASLVEKYGPKKWGIVATYLPMRNAKQCHQRWHYVLKPSISRETWTEKEDYIIYHYQRLLGNKWSHIAKYLSGRTGYAVRNRHAFLVK 1379
BLAST of NO02G06050 vs. NCBI_GenBank
Match: XP_013066115.1 (PREDICTED: transcriptional activator Myb-like isoform X1 [Biomphalaria glabrata]) HSP 1 Score: 119.8 bits (299), Expect = 2.800e-23 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 0 Query: 135 QLSHGGHPSPHDPNKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQRHFRPFLGPPVALH 270 Q H H + + WT EED R+ +LV+ GPK+W +IS H R KQC +RWH L P I + WTEEEDQ I Q ++GN+W+ IAKYL GRT AI+N +N KR E + R ++ ++L+ Sbjct: 104 QCQHRWHKVLNPDLIKGPWTREEDNRVIQLVNEYGPKRWTLISKHLKGRTGKQCRERWHNHLNPSIKKTAWTEEEDQLIYQLHRRLGNRWAEIAKYLPGRTDNAIKNHWNSTMKRKFEGEESSDRKYISNGLSLY 238
BLAST of NO02G06050 vs. NCBI_GenBank
Match: XP_013066116.1 (PREDICTED: transcriptional activator Myb-like isoform X2 [Biomphalaria glabrata]) HSP 1 Score: 119.8 bits (299), Expect = 2.800e-23 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 0 Query: 135 QLSHGGHPSPHDPNKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQRHFRPFLGPPVALH 270 Q H H + + WT EED R+ +LV+ GPK+W +IS H R KQC +RWH L P I + WTEEEDQ I Q ++GN+W+ IAKYL GRT AI+N +N KR E + R ++ ++L+ Sbjct: 104 QCQHRWHKVLNPDLIKGPWTREEDNRVIQLVNEYGPKRWTLISKHLKGRTGKQCRERWHNHLNPSIKKTAWTEEEDQLIYQLHRRLGNRWAEIAKYLPGRTDNAIKNHWNSTMKRKFEGEESSDRKYISNGLSLY 238
BLAST of NO02G06050 vs. NCBI_GenBank
Match: XP_013066117.1 (PREDICTED: transcriptional activator Myb-like isoform X3 [Biomphalaria glabrata]) HSP 1 Score: 119.8 bits (299), Expect = 2.800e-23 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 0 Query: 135 QLSHGGHPSPHDPNKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQRHFRPFLGPPVALH 270 Q H H + + WT EED R+ +LV+ GPK+W +IS H R KQC +RWH L P I + WTEEEDQ I Q ++GN+W+ IAKYL GRT AI+N +N KR E + R ++ ++L+ Sbjct: 104 QCQHRWHKVLNPDLIKGPWTREEDNRVIQLVNEYGPKRWTLISKHLKGRTGKQCRERWHNHLNPSIKKTAWTEEEDQLIYQLHRRLGNRWAEIAKYLPGRTDNAIKNHWNSTMKRKFEGEESSDRKYISNGLSLY 238
BLAST of NO02G06050 vs. NCBI_GenBank
Match: XP_013066118.1 (PREDICTED: transcriptional activator Myb-like isoform X4 [Biomphalaria glabrata]) HSP 1 Score: 119.8 bits (299), Expect = 2.800e-23 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 0 Query: 135 QLSHGGHPSPHDPNKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQRHFRPFLGPPVALH 270 Q H H + + WT EED R+ +LV+ GPK+W +IS H R KQC +RWH L P I + WTEEEDQ I Q ++GN+W+ IAKYL GRT AI+N +N KR E + R ++ ++L+ Sbjct: 104 QCQHRWHKVLNPDLIKGPWTREEDNRVIQLVNEYGPKRWTLISKHLKGRTGKQCRERWHNHLNPSIKKTAWTEEEDQLIYQLHRRLGNRWAEIAKYLPGRTDNAIKNHWNSTMKRKFEGEESSDRKYISNGLSLY 238
BLAST of NO02G06050 vs. NCBI_GenBank
Match: XP_013066119.1 (PREDICTED: myb-related protein B-like isoform X5 [Biomphalaria glabrata]) HSP 1 Score: 119.8 bits (299), Expect = 2.800e-23 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 0 Query: 135 QLSHGGHPSPHDPNKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQRHFRPFLGPPVALH 270 Q H H + + WT EED R+ +LV+ GPK+W +IS H R KQC +RWH L P I + WTEEEDQ I Q ++GN+W+ IAKYL GRT AI+N +N KR E + R ++ ++L+ Sbjct: 55 QCQHRWHKVLNPDLIKGPWTREEDNRVIQLVNEYGPKRWTLISKHLKGRTGKQCRERWHNHLNPSIKKTAWTEEEDQLIYQLHRRLGNRWAEIAKYLPGRTDNAIKNHWNSTMKRKFEGEESSDRKYISNGLSLY 189
BLAST of NO02G06050 vs. NCBI_GenBank
Match: XP_005852752.1 (myb-like dna-binding domain containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU23079.1 myb-like dna-binding domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 118.6 bits (296), Expect = 6.200e-23 Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 0 Query: 148 NKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQR 257 +K+ W EED L+ LVH G + WG I+ HF NRN KQCHQRW+Y L P + WT EED+ I+ +Q +GNKW+ IA ++ GRTG+A++NR + + ++ + ++ Sbjct: 168 SKKRPWKPEEDEYLRALVHRQGARDWGQIAEHFENRNGKQCHQRWNYFLSPTVHSGAWTAEEDEKIVNFQCLLGNKWARIATHIPGRTGHAVKNRAHQIANKMRKRERK 276
BLAST of NO02G06050 vs. NCBI_GenBank
Match: EWM24948.1 (myb-like dna-binding domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 118.6 bits (296), Expect = 6.200e-23 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 0 Query: 148 NKRHTWTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRLLEENQRHFR 260 +K+ W EED L+ LVH G + WG I+ HF NRN KQCHQRW+Y L P + WT EED+ I+ +Q +GNKW+ IA ++ GRTG+A++NR + + ++ + ++ R Sbjct: 211 SKKRPWKPEEDEYLRALVHRQGARDWGQIAEHFENRNGKQCHQRWNYFLSPTVHSGAWTAEEDEKIVNFQCLLGNKWARIATHIPGRTGHAVKNRAHQIANKIRKRERKPAR 322
BLAST of NO02G06050 vs. NCBI_GenBank
Match: XP_012942102.1 (PREDICTED: myb-related protein B-like [Aplysia californica]) HSP 1 Score: 116.3 bits (290), Expect = 3.100e-22 Identity = 54/107 (50.47%), Postives = 67/107 (62.62%), Query Frame = 0 Query: 153 WTTEEDRRLKELVHTVGPKKWGIISTHFNNRNAKQCHQRWHYVLKPCITREPWTEEEDQAIMQYQIQIGNKWSHIAKYLSGRTGYAIRNRYNFLQKRL--LEENQRH 258 W EED R+ +LV GPK+W +IS H R KQC +RWH L P I + WTEEEDQ I Q ++GN+W+ IAKYL GRT AI+N +N KR +EEN H Sbjct: 111 WAKEEDNRVIQLVKEYGPKRWTLISKHLKGRTGKQCRERWHNHLNPSIKKSAWTEEEDQLIYQLHRRLGNRWAAIAKYLPGRTDNAIKNHWNSTMKRKFEVEENTDH 217 The following BLAST results are available for this feature:
BLAST of NO02G06050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G06050 ID=NO02G06050|Name=NO02G06050|organism=Nannochloropsis oceanica|type=gene|length=1841bpback to top protein sequence of NO02G06050.1 >NO02G06050.1-protein ID=NO02G06050.1-protein|Name=NO02G06050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=571bpback to top Synonyms
Publications
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