NO02G06030, NO02G06030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G06030 vs. NCBI_GenBank
Match: EWM30075.1 (major facilitator superfamily domain-containing protein [Nannochloropsis gaditana] >EWM30076.1 major facilitator superfamily domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 357.8 bits (917), Expect = 4.700e-95 Identity = 191/309 (61.81%), Postives = 242/309 (78.32%), Query Frame = 0 Query: 90 SCIIPSVPPLLYARTSGGGRASNPSIPGNRLRSSFLAEIEGLKKPTLGRFAVSWSHNHSSYHDPPGLVRLPTTRELYPEGVKASKEARALCVPGTPGHMFVLSCACFVVVGSVAAKVVLMAVSVELMADMGMSLQMYGVVGGLPSLTSIFACPLGGGVVDAIGSDRGCLLFAAVVLLGSACGAVGVSIRSLPLLMAGQLVLGLGEKPLGSGQLVFIRLAADPANLAFYFSVASSVYRTASFGSFVLAPLVAAASPIGYRASVYMATGLCFLSLLSSLPMLGKLRHLDAYLRPA-AVVGEELGEEMYLME 398 S I+P PP L S ++ S G++LRSSF+ EI L KPTL R AVS+ + + DPPGL R+PTT EL+PEGVK +KEA+ALCVPGT G++F+L CACF++VGSVAAK VLMAVSV+LMA M MS++ YGVV GLPSL+SIFAC +GG V+DAIG+D+ C+LF +VLLG+A V VS+RSL LL+ GQ+VLG+GEKPLGSGQLVFIRLA DPA + FYF+VAS+ YR ASFG+F+L+PLVA +S G++AS++M T LCFLS LS+ PMLGKL+HL+ +L+ A VVGEE GEE+ LM+ Sbjct: 34 SYIMPKAPPSLSGPNSAAEGGTSASRIGSQLRSSFINEINTLTKPTLSRLAVSYV-GSAPFSDPPGLARIPTTTELFPEGVKGNKEAQALCVPGTAGNVFILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHLEPFLKAAPVVVGEEEGEEVILMK 341
BLAST of NO02G06030 vs. NCBI_GenBank
Match: XP_005855840.1 (major facilitator superfamily domain-containing protein 1 isoform 1 [Nannochloropsis gaditana CCMP526] >EKU20513.1 major facilitator superfamily domain-containing protein 1 isoform 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 175.6 bits (444), Expect = 3.300e-40 Identity = 102/260 (39.23%), Postives = 163/260 (62.69%), Query Frame = 0 Query: 121 RSSFLAEIEGLKKPTLGRFAVSWSHNHSSYHDPPGLVRLPTTRELYPEGVKASKEARALCVPGTPGHMFVLSCACFVVVGSVAAKVVLMAVSVELMADMGMSLQMYGVVGGLPSLTSIFACPLGGGVVDAIGSDRGCLLFAAVVLLGSACGAVGVSIRSLPLLMAGQLVLGLGEKPLGSGQLVFIRLAADPANLAFYFSVASSVYRTASFGSFVLAPLVAAASPIGYRASVYMATGLCFLSLLSSLPMLGKLRHLDAYLR 381 +S + ++E L+ P+L R A+S + + D P + + +L VK ++EA+ LC+PGT HM ++ AC + G ++ +L AVS ++M GM+ YG + GLP++ +IFA P+GG +VD +G+D+ C+L++ + +LGS C + V IRS+ LL A Q++LG+G L Q VF++LAADP +F F+++ S+ F +F L+PL+ SP GY ASV+ +TG+ LS L ++P+LGKLRH+ LR Sbjct: 74 QSFMVRQLESLRAPSLSRVALSGAPS-----DIPDVGLMLPHVDL---DVK-TEEAKMLCIPGTRWHMLLVVLACSIAFGPSFSRSILSAVSADVMLAFGMTKATYGALSGLPAIPNIFASPIGGAIVDRLGADKSCVLYSGITVLGSICLSTAVYIRSVHLLAAAQILLGIGRGTLVIAQKVFLKLAADPKETSFLFALSFSISHAGMFMAFFLSPLIEDNSPYGYLASVWASTGITVLSFLCTIPLLGKLRHILPLLR 324
BLAST of NO02G06030 vs. NCBI_GenBank
Match: EWM22710.1 (major facilitator superfamily domain-containing protein 1 isoform 1 [Nannochloropsis gaditana]) HSP 1 Score: 175.6 bits (444), Expect = 3.300e-40 Identity = 102/260 (39.23%), Postives = 163/260 (62.69%), Query Frame = 0 Query: 121 RSSFLAEIEGLKKPTLGRFAVSWSHNHSSYHDPPGLVRLPTTRELYPEGVKASKEARALCVPGTPGHMFVLSCACFVVVGSVAAKVVLMAVSVELMADMGMSLQMYGVVGGLPSLTSIFACPLGGGVVDAIGSDRGCLLFAAVVLLGSACGAVGVSIRSLPLLMAGQLVLGLGEKPLGSGQLVFIRLAADPANLAFYFSVASSVYRTASFGSFVLAPLVAAASPIGYRASVYMATGLCFLSLLSSLPMLGKLRHLDAYLR 381 +S + ++E L+ P+L R A+S + + D P + + +L VK ++EA+ LC+PGT HM ++ AC + G ++ +L AVS ++M GM+ YG + GLP++ +IFA P+GG +VD +G+D+ C+L++ + +LGS C + V IRS+ LL A Q++LG+G L Q VF++LAADP +F F+++ S+ F +F L+PL+ SP GY ASV+ +TG+ LS L ++P+LGKLRH+ LR Sbjct: 74 QSFMVRQLESLRAPSLSRVALSGAPS-----DIPDVGLMLPHVDL---DVK-TEEAKMLCIPGTRWHMLLVVLACSIAFGPSFSRSILSAVSADVMLAFGMTKATYGALSGLPAIPNIFASPIGGAIVDRLGADKSCVLYSGITVLGSICLSTAVYIRSVHLLAAAQILLGIGRGTLVIAQKVFLKLAADPKETSFLFALSFSISHAGMFMAFFLSPLIEDNSPYGYLASVWASTGITVLSFLCTIPLLGKLRHILPLLR 324 The following BLAST results are available for this feature:
BLAST of NO02G06030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3 Position : 0 Zoom : x 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G06030 ID=NO02G06030|Name=NO02G06030|organism=Nannochloropsis oceanica|type=gene|length=2080bpback to top protein sequence of NO02G06030.1 >NO02G06030.1-protein ID=NO02G06030.1-protein|Name=NO02G06030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bpback to top Synonyms
Publications
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