NO02G05980, NO02G05980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G05980 vs. NCBI_GenBank
Match: CBJ26071.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.2 bits (230), Expect = 8.900e-16 Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = 0 Query: 38 RERMDLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCMLLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPT-----SDARGLLSACLSFLRDK 138 RER ++L G DRC+G++V+EML +E S D + LC L P F H F+++ +ADE YA QC++Q+I +L GPP PT S+ LL+AC+ FL ++ Sbjct: 278 RERREMLVGADRCLGDIVSEMLATIEDN---DESHEDAHIYLCTLFPQFSHIFSEMKEADEEYARQCLEQHIALLRGPPNRPTAKSLSSEQGDLLTACVDFLSEQ 379
BLAST of NO02G05980 vs. NCBI_GenBank
Match: OQR99084.1 (hypothetical protein ACHHYP_07349 [Achlya hypogyna]) HSP 1 Score: 83.2 bits (204), Expect = 9.200e-13 Identity = 48/109 (44.04%), Postives = 60/109 (55.05%), Query Frame = 0 Query: 29 ASPDRAAL--LRERMDLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCM-LLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFL 135 A D+A L+ + D L GL+RC GEVVTEML+V+E DGE+RL M + P+F ++QL D YA QC YI L GPP PT D GL L F+ Sbjct: 159 AKQDKATFEQLKIKRDGLLGLERCAGEVVTEMLQVIEDD-----DGEDGELRLVMEIFPNFADLYSQLKMNDPDYAAQCHKHYIEYLQGPPNRPTVDESGLYQVVLEFM 262
BLAST of NO02G05980 vs. NCBI_GenBank
Match: XP_009821755.1 (hypothetical protein H257_00670 [Aphanomyces astaci] >ETV89355.1 hypothetical protein H257_00670 [Aphanomyces astaci]) HSP 1 Score: 82.4 bits (202), Expect = 1.600e-12 Identity = 47/110 (42.73%), Postives = 59/110 (53.64%), Query Frame = 0 Query: 29 ASPDRAALLRERM--DLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCM-LLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFLR 136 A RA +ER+ D L GL+RC+GEVVTEML ++E +GE+RL M + P F FNQL D YA C Y+ L GPP PT D GL L F++ Sbjct: 185 AQQQRAVFEQERIKRDGLLGLERCMGEVVTEMLHIIEDD-----DGEEGEMRLVMDVFPSFADLFNQLKSNDREYASHCHKHYVEYLRGPPNRPTVDESGLFGVVLDFMK 289
BLAST of NO02G05980 vs. NCBI_GenBank
Match: XP_009821756.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV89356.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 82.4 bits (202), Expect = 1.600e-12 Identity = 47/110 (42.73%), Postives = 59/110 (53.64%), Query Frame = 0 Query: 29 ASPDRAALLRERM--DLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCM-LLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFLR 136 A RA +ER+ D L GL+RC+GEVVTEML ++E +GE+RL M + P F FNQL D YA C Y+ L GPP PT D GL L F++ Sbjct: 168 AQQQRAVFEQERIKRDGLLGLERCMGEVVTEMLHIIEDD-----DGEEGEMRLVMDVFPSFADLFNQLKSNDREYASHCHKHYVEYLRGPPNRPTVDESGLFGVVLDFMK 272
BLAST of NO02G05980 vs. NCBI_GenBank
Match: XP_008609605.1 (hypothetical protein SDRG_05656 [Saprolegnia diclina VS20] >EQC36824.1 hypothetical protein SDRG_05656 [Saprolegnia diclina VS20]) HSP 1 Score: 81.6 bits (200), Expect = 2.700e-12 Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 27 AFASPDRAAL--LRERMDLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCM-LLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFL 135 A A D+AA L+ + D L GL+RC GEVVTEML V+E +GE+RL M + P+F ++QL D YA QC ++ L GPP PT D GL L F+ Sbjct: 159 AAAKQDKAAFEQLKIKRDGLLGLERCAGEVVTEMLEVIEDD-----DGEEGEMRLVMEIFPNFADLYSQLKMNDAAYAAQCHKHFVEYLQGPPNRPTIDESGLYHIVLDFM 264
BLAST of NO02G05980 vs. NCBI_GenBank
Match: XP_012196524.1 (hypothetical protein SPRG_02565 [Saprolegnia parasitica CBS 223.65] >KDO32873.1 hypothetical protein SPRG_02565 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 81.6 bits (200), Expect = 2.700e-12 Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 27 AFASPDRAAL--LRERMDLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCM-LLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFL 135 A A D+AA L+ + D L GL+RC GEVVTEML V+E +GE+RL M + P+F ++QL D YA QC ++ L GPP PT D GL L F+ Sbjct: 158 AAAKQDKAAFEQLKIKRDGLLGLERCAGEVVTEMLEVIEDD-----DGEEGEMRLVMEIFPNFADLYSQLKMNDAAYAAQCHKHFVEYLQGPPNRPTIDESGLYHIVLDFM 263
BLAST of NO02G05980 vs. NCBI_GenBank
Match: XP_008862409.1 (hypothetical protein H310_01148 [Aphanomyces invadans] >ETW08604.1 hypothetical protein H310_01148 [Aphanomyces invadans]) HSP 1 Score: 81.3 bits (199), Expect = 3.500e-12 Identity = 44/97 (45.36%), Postives = 54/97 (55.67%), Query Frame = 0 Query: 40 RMDLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCM-LLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFLR 136 + D L GL+RC GEVVTEML ++E A +GE+RL M + P F F QL D YA QC Y+ L GPP PT DA GL L F++ Sbjct: 179 KRDGLLGLERCTGEVVTEMLHIIEDD-----DAEEGEMRLVMDVFPSFADMFGQLKSNDPEYAAQCHKHYMEYLRGPPNRPTVDASGLFDVVLDFMK 270
BLAST of NO02G05980 vs. NCBI_GenBank
Match: CBJ30236.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.5 bits (197), Expect = 5.900e-12 Identity = 47/119 (39.50%), Postives = 63/119 (52.94%), Query Frame = 0 Query: 21 KDNLWAAFASPDRAALLRERMDLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRL-CMLLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFLRDKE 139 K ++ AA P R A + + D L GL+R E+VT ML VVE +GE+RL + P F F Q++ AD+ +ALQC+ Y L GPP PT D G L +SFL+ E Sbjct: 65 KPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLLVVE-----ECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLE 178
BLAST of NO02G05980 vs. NCBI_GenBank
Match: EWM30062.1 (hypothetical protein Naga_100170g11 [Nannochloropsis gaditana]) HSP 1 Score: 79.3 bits (194), Expect = 1.300e-11 Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0 Query: 5 LQALANKLVLLGESEMKDNLWAAFASPDRAALLRERMDLLEGLDRCVGEVVTEMLRVVEG 65 ++ LA+KL+ LGE EM++ L + FAS RA RE+MDLLEGLDRCVGEVVTEMLR+VEG Sbjct: 167 VEVLASKLLQLGEKEMEEKLCSTFASSARATQWREQMDLLEGLDRCVGEVVTEMLRLVEG 226
BLAST of NO02G05980 vs. NCBI_GenBank
Match: OQR95692.1 (hypothetical protein THRCLA_07644 [Thraustotheca clavata]) HSP 1 Score: 77.8 bits (190), Expect = 3.900e-11 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 0 Query: 40 RMDLLEGLDRCVGEVVTEMLRVVEGGMTAAVSAADGEVRLCM-LLPHFEHFFNQLVQADEIYALQCIDQYIRVLNGPPTYPTSDARGLLSACLSFLR 136 + D L GL+RC GEVVTEML+V+E + +GE+RL M + P+F ++QL D YA QC Y+ L GPP PT D GL + F++ Sbjct: 182 KRDGLLGLERCAGEVVTEMLQVIED-----EDSEEGEMRLVMEIFPNFADLYSQLKMNDPEYAAQCHKHYLEYLQGPPNRPTVDESGLYQVVVEFMK 273 The following BLAST results are available for this feature:
BLAST of NO02G05980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 16
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05980 ID=NO02G05980|Name=NO02G05980|organism=Nannochloropsis oceanica|type=gene|length=2820bpback to top protein sequence of NO02G05980.1 >NO02G05980.1-protein ID=NO02G05980.1-protein|Name=NO02G05980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bpback to top Synonyms
Publications
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