NO02G05970, NO02G05970 (gene) Nannochloropsis oceanica

Overview
NameNO02G05970
Unique NameNO02G05970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4109
Alignment locationchr2:1592724..1597664 -

Link to JBrowse

Properties
Property NameValue
Descriptionsplicing factor-related
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1592724..1597664 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045131pre-mRNA branch point binding
GO:0003723RNA binding
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR036875Znf_CCHC_sf
IPR031150BBP/SF1
IPR004088KH_dom_type_1
IPR032570SF1-HH
IPR001878Znf_CCHC
IPR004087KH_dom
Homology
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: XP_005854854.1 (hypothetical protein NGA_0419300, partial [Nannochloropsis gaditana CCMP526] >EKU21508.1 hypothetical protein NGA_0419300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 539.3 bits (1388), Expect = 1.700e-149
Identity = 268/301 (89.04%), Postives = 286/301 (95.02%), Query Frame = 0 
Query:  146 SQPEAPPGAALDPETLQEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            SQPEA P +++DP+TLQEIIALQLRLDNIHQRTATV MDALA+ES+PDKSPSPPPIYD  GKR NTREERM+A+LK ERQ+VIERLLKINPLFRPPADYVRQKP RRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEG+R RM    ANKD+QDE+DDLHV+++GETE IVE+ASEMVAKLL+PIDDAVNSQKMEQLRQLALINGTLRE+EYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQ GNKEVLDQEYLNFMAELGEGP
Sbjct:  189 SQPEATPSSSMDPDTLQEIIALQLRLDNIHQRTATVTMDALAQESNPDKSPSPPPIYDSHGKRLNTREERMKAALKKERQDVIERLLKINPLFRPPADYVRQKPFRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGSRNRML--GANKDVQDEFDDLHVHVSGETEEIVEKASEMVAKLLIPIDDAVNSQKMEQLRQLALINGTLREDEYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQSGNKEVLDQEYLNFMAELGEGP 487
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: EWM30057.1 (splicing factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 493.4 bits (1269), Expect = 1.000e-135
Identity = 245/279 (87.81%), Postives = 264/279 (94.62%), Query Frame = 0 
Query:  146 SQPEAPPGAALDPETLQEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQ 425
            SQPEA P +++DP+TLQEIIALQLRLDNIHQRTATV MDALA+ES+PDKSPSPPPIYD  GKR NTREERM+A+LK ERQ+VIERLLKINPLFRPPADYVRQKP RRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEG+R RM    ANKD+QDE+DDLHV+++GETE IVE+ASEMVAKLL+PIDDAVNSQKMEQLRQLALINGTLRE+EYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRMGGQAG +
Sbjct:  189 SQPEATPSSSMDPDTLQEIIALQLRLDNIHQRTATVTMDALAQESNPDKSPSPPPIYDSHGKRLNTREERMKAALKKERQDVIERLLKINPLFRPPADYVRQKPFRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGSRNRML--GANKDVQDEFDDLHVHVSGETEEIVEKASEMVAKLLIPIDDAVNSQKMEQLRQLALINGTLREDEYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGGR 465
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: CBJ26676.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 345.1 bits (884), Expect = 4.600e-91
Identity = 182/319 (57.05%), Postives = 228/319 (71.47%), Query Frame = 0 
Query:  144 RWS-----QPEAPPGAA-----------LDPETLQEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGA-RGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRM-GGQAGAQGGNKEVLDQEYLNFMAELGE 445
            RWS     Q  A PGA            L  E +QE + L +RL   +++ ATV  DA+A+ +DPD+SPSPPP YD  G R N R  RMRASL  ER +VIE ++K+NP+F+PPAD+V+ KP R+LYIP  E+P YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEGA RG MA         DE D+LHVY++GETE  VE+A++ V KLL P+DD  N  K +QLR+LALINGTLREE+YCN+CGEKGHRQFECP R  T+   V V+CA+CGDTSHPTRDC +   +A  Q G++  LD+EY++FMAELG+
Sbjct:  394 RWSSEGDAQAVALPGAGVSKNIPGMPVNLTQEQIQENLVLHMRLQQANEKLATVEQDAIARSTDPDRSPSPPPRYDANGVRTNNRNVRMRASLNRERTKVIEEMMKLNPMFKPPADFVKTKPHRKLYIPTDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAI--------DEDDELHVYVSGETEEAVEKAAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKAQGQPGHEASLDKEYMSFMAELGD 704
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: XP_009519176.1 (hypothetical protein PHYSODRAFT_483336 [Phytophthora sojae] >EGZ23888.1 hypothetical protein PHYSODRAFT_483336 [Phytophthora sojae])

HSP 1 Score: 337.4 bits (864), Expect = 9.500e-89
Identity = 170/295 (57.63%), Postives = 222/295 (75.25%), Query Frame = 0 
Query:  154 AALDPETLQEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTR--HNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            A L  +  Q+ + L+ +LDNI+Q+  TV MDA   E DP++SPSPPP YD  G R NTRE RM+A+L+  R+E I++L+K+NPLFRPPADY RQK  R++YIPIKEFP+YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEG++G+  ++       DE DDLHV ITG+ E  +++A++ V  LLVP+DD  NS K +QLR+LALINGTLR+++YC++CGEKGHRQ+ECP R  H T  K VNVKCAICGD+SHPTRDC    ++  +      +D+EY +FM +LGE P
Sbjct:  174 AGLLTQKQQQTVMLRAQLDNINQKLKTVAMDAALIEKDPNRSPSPPPQYDSNGMRTNTREVRMKAALEKRRRETIDQLVKVNPLFRPPADYTRQKLHRKIYIPIKEFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKTNA-------DENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRT-FKPVNVKCAICGDSSHPTRDCTQKRKSAEENA---AIDKEYQSFMQQLGEAP 457
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: XP_008891898.1 (hypothetical protein PPTG_02535 [Phytophthora parasitica INRA-310] >ETI49914.1 hypothetical protein F443_06421 [Phytophthora parasitica P1569] >ETN22665.1 hypothetical protein PPTG_02535 [Phytophthora parasitica INRA-310] >KUG00663.1 Branchpoint-bridging protein [Phytophthora nicotianae])

HSP 1 Score: 335.1 bits (858), Expect = 4.700e-88
Identity = 168/287 (58.54%), Postives = 219/287 (76.31%), Query Frame = 0 
Query:  162 QEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTR--HNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            Q+ + L+ +L+NI+Q+  TVVMDA   E DP++SPSPPP YD  GKR NTRE RM+A+L+  R+E IE L+KINPLFRPPADY RQK  R++YIPI++FP+YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEG++G+  ++       DE DDLHV ITG+ E  +++A++ V  LLVP+DD  N+ K +QLR+LALINGTLR+++YC++CGEKGHRQ+ECP R  H T  K VNVKCAICGD+SHPTRDC    ++  +      +D+EY  FM +LGE P
Sbjct:  175 QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNA-------DENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRT-FKPVNVKCAICGDSSHPTRDCTQKKKSAEENA---AIDKEYQQFMQQLGEAP 450
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: XP_008891900.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI49915.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETN22666.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 335.1 bits (858), Expect = 4.700e-88
Identity = 168/287 (58.54%), Postives = 219/287 (76.31%), Query Frame = 0 
Query:  162 QEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTR--HNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            Q+ + L+ +L+NI+Q+  TVVMDA   E DP++SPSPPP YD  GKR NTRE RM+A+L+  R+E IE L+KINPLFRPPADY RQK  R++YIPI++FP+YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEG++G+  ++       DE DDLHV ITG+ E  +++A++ V  LLVP+DD  N+ K +QLR+LALINGTLR+++YC++CGEKGHRQ+ECP R  H T  K VNVKCAICGD+SHPTRDC    ++  +      +D+EY  FM +LGE P
Sbjct:  175 QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNA-------DENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRT-FKPVNVKCAICGDSSHPTRDCTQKKKSAEENA---AIDKEYQQFMQQLGEAP 450
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: XP_008891901.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETI49916.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETL96385.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN22667.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310])

HSP 1 Score: 335.1 bits (858), Expect = 4.700e-88
Identity = 168/287 (58.54%), Postives = 219/287 (76.31%), Query Frame = 0 
Query:  162 QEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTR--HNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            Q+ + L+ +L+NI+Q+  TVVMDA   E DP++SPSPPP YD  GKR NTRE RM+A+L+  R+E IE L+KINPLFRPPADY RQK  R++YIPI++FP+YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEG++G+  ++       DE DDLHV ITG+ E  +++A++ V  LLVP+DD  N+ K +QLR+LALINGTLR+++YC++CGEKGHRQ+ECP R  H T  K VNVKCAICGD+SHPTRDC    ++  +      +D+EY  FM +LGE P
Sbjct:   10 QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNA-------DENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRT-FKPVNVKCAICGDSSHPTRDCTQKKKSAEENA---AIDKEYQQFMQQLGEAP 285
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: ETL96383.1 (hypothetical protein L917_06113 [Phytophthora parasitica])

HSP 1 Score: 335.1 bits (858), Expect = 4.700e-88
Identity = 168/287 (58.54%), Postives = 219/287 (76.31%), Query Frame = 0 
Query:  162 QEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTR--HNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            Q+ + L+ +L+NI+Q+  TVVMDA   E DP++SPSPPP YD  GKR NTRE RM+A+L+  R+E IE L+KINPLFRPPADY RQK  R++YIPI++FP+YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEG++G+  ++       DE DDLHV ITG+ E  +++A++ V  LLVP+DD  N+ K +QLR+LALINGTLR+++YC++CGEKGHRQ+ECP R  H T  K VNVKCAICGD+SHPTRDC    ++  +      +D+EY  FM +LGE P
Sbjct:  175 QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNA-------DENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRT-FKPVNVKCAICGDSSHPTRDCTQKKKSAEENA---AIDKEYQQFMQQLGEAP 450
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: ETL96384.1 (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 335.1 bits (858), Expect = 4.700e-88
Identity = 168/287 (58.54%), Postives = 219/287 (76.31%), Query Frame = 0 
Query:  162 QEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTR--HNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            Q+ + L+ +L+NI+Q+  TVVMDA   E DP++SPSPPP YD  GKR NTRE RM+A+L+  R+E IE L+KINPLFRPPADY RQK  R++YIPI++FP+YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEG++G+  ++       DE DDLHV ITG+ E  +++A++ V  LLVP+DD  N+ K +QLR+LALINGTLR+++YC++CGEKGHRQ+ECP R  H T  K VNVKCAICGD+SHPTRDC    ++  +      +D+EY  FM +LGE P
Sbjct:  175 QQSVMLRAQLENINQKLKTVVMDAAMIEKDPNRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLHRKIYIPIRDFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNA-------DENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRT-FKPVNVKCAICGDSSHPTRDCTQKKKSAEENA---AIDKEYQQFMQQLGEAP 450
[Close]
BLAST of NO02G05970 vs. NCBI_GenBank
Match: XP_002999021.1 (branchpoint-bridging protein, putative [Phytophthora infestans T30-4] >EEY69167.1 branchpoint-bridging protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 334.7 bits (857), Expect = 6.200e-88
Identity = 176/331 (53.17%), Postives = 228/331 (68.88%), Query Frame = 0 
Query:  140 KKKSRWSQP--EAPPGA---------------------ALDPETLQEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTRHNTKV-KMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGP 447
            ++KSRW +P   A  G+                      L  E  Q+ + L+  L+ I+Q+  TVVMDA   E DP +SPSPPP YD  GKR NTRE RM+A+L+  R+E IE L+KINPLFRPPADY RQK +RR+YIPI EFP+YNFIGLIIGPRG TQK+ME++T  KI+IRGKGSVKEG++G+  ++       DE DDLHV ITG+ E  +++A++ V  LLVP+DD  N+ K +QLR+LALINGTLR+++YC++CGEKGHRQ+ECP R   +  K VNVKCAICGD+SHPTRDC    ++  +      +D+EY  FM +LGE P
Sbjct:  131 RRKSRWGEPVESAADGSGXXXXXXXXXXXXXXXXSGMTGLFNEKQQQSVILRAELETINQKLKTVVMDAALVEKDPSRSPSPPPQYDSNGKRTNTREVRMKAALEKRRRETIEELVKINPLFRPPADYARQKLNRRIYIPIHEFPSYNFIGLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNA-------DENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAQRTFKAVNVKCAICGDSSHPTRDCTQKKKSAEESA---AIDKEYQQFMQQLGEAP 451
The following BLAST results are available for this feature:
BLAST of NO02G05970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854854.11.700e-14989.04hypothetical protein NGA_0419300, partial [Nannoch... [more]
EWM30057.11.000e-13587.81splicing factor 1 [Nannochloropsis gaditana][more]
CBJ26676.14.600e-9157.05conserved unknown protein [Ectocarpus siliculosus][more]
XP_009519176.19.500e-8957.63hypothetical protein PHYSODRAFT_483336 [Phytophtho... [more]
XP_008891898.14.700e-8858.54hypothetical protein PPTG_02535 [Phytophthora para... [more]
XP_008891900.14.700e-8858.54hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008891901.14.700e-8858.54hypothetical protein, variant 2 [Phytophthora para... [more]
ETL96383.14.700e-8858.54hypothetical protein L917_06113 [Phytophthora para... [more]
ETL96384.14.700e-8858.54hypothetical protein, variant 1 [Phytophthora para... [more]
XP_002999021.16.200e-8853.17branchpoint-bridging protein, putative [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL017nonsL017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR001ngnoR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007308NSK007308Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05970.2NO02G05970.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G05970.1NO02G05970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668110gene_1189Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100170g9gene584Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05970.2NO02G05970.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G05970.1NO02G05970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05970 ID=NO02G05970|Name=NO02G05970|organism=Nannochloropsis oceanica|type=gene|length=4109bp
CTGATGGGATGTCTTCGTATACTCACCCATCATCTAGTAACTTATTTTCC
ATCTCCGTTCATTCATCTTTTCTTGGCTGGACACCCACAGCATCAAGGAG
CGCTTCGGACCCTACCCTTCGTTTTGGCAAGACCTGCTCACGTGGGAGCA
CACACGgtgggtggagtaaggggggtggggggaggggaagaattaaaggg
gaaataaaagacgtgaagggcacgtcatggattcgatagggtatgctgga
gtgggtgccggtagtaggtccaatcaccttacccctccctccctccctcc
ctccctccctccttagCGTGGTCCAAAAGTTGTATCTGCGGTGGATGGAC
ACAGGGGCCAGCGGGGAGGACTTGCTGGGTATCTTGGGAGATACAAAGAA
AGAGGTGACAGTGGAAGTGGTCGAGGCAGCTGCTGGGACGAATGAGGGAG
GGAAGGAGGGAGGGGGGGAGGTAGGGGGGGAGGACAGGCATGTGAATGGG
GGAGCAGGGAATGGAGGGGGGCGCTCGTCTAGCGCCCTGACGGAGGAGCA
GCAGCAGCAGGAAGAGCAGAAGGAGCAGGAGCAGGAGCAGGAGCATGAGG
AGAAGAAAGCGGAGGAAAAAGAGAAGCGGCGCAAGAGCCGGTGGGGGGGG
GGGGAGGGGGAGACAGGAACACTGACAGCAGCAGCAACAACAGCAGCAGG
AGAGTCAAAACGACGCTCACGGTGGGGGGATGGGGGTGGGGCCACCGGGG
AGGCGGGCAACAAGAAGAAGTCCAGgtagggagccatgtcaagcaacgga
tgggggataaggacaacgatggagaggcgagagaaacgaataaccgcatg
accatacgccctaggaggacttgcgtcccgcgtgtcttttgggagcgtcg
gccccttgccacaagactcacccctcccttcctccctccctccccctccc
tctctccctccttacctcccttcttctcagGTGGAGTCAGCCCGAAGCCC
CTCCCGGCGCTGCCTTGGACCCCGAGACGCTGCAGGAGATCATCGCCCTA
CAGCTCCGCCTGGACAACATCCACCAACGCACGgtagggaggaaggggag
ggagggagggagggaaagggcggagggtgggaagaacagaggtcaacctt
gtgatcaaacacctttcactcatgcattgcctcttctatccctccctccc
tccctcccttccgtttccattcctgcccagGCGACCGTGGTGATGGACGC
TCTGGCCAAAGAAAGCGACCCGGATAAATCCCCCTCCCCGCCACCCATCT
ATGACGGgtacgctcccctccctccctccctccctccctccctccctccc
tccctcccttccttgctttccttcctcacacggactgtcctcttcacttc
cccgtcttcccctcttttccctccgtccccttcctctcactgttttttcc
attcctttttctcctctttctcctccctctctttcttccaccctcagTCA
GGGCAAGCGACAAAACACGCGGGAGGAGCGGATGCGGGCCTCGCTCAAGG
TTGAACGACAAgtacgtctacaccccctctctccctctctccctccctcc
ctccctccctccctccgcctctccctgttccccttctcgatttttttgcc
tctttcgccgcttccaatcgcctaagcatcccttgcctccattatgacgc
tccctccctccctccctccctccctccagGAAGTAATTGAACGCCTCCTT
AAGATCAATCCCCTCTTCCGACCGCCGGCTGACTACGTCCGCCAGAAGCC
CTCCCGACGCCTCTACATCCCCATCAAGgtagggagcgagggagggagtg
agggaaggggatctgtactcatcgaagttcccagggagggaggggagggg
ataaggcactgcaatagcgatcatccctgtctctcattcatgcactcaat
ctccctccttccctccctccctccctccctccctcagGAGTTTCCCACCT
ACAACTTTATCGGTCTCATCATCGGACCGCGCGGGGCCACCCAAAAGCAA
ATGGAGAAAGACACGGGAGCCAAGATCTCCATCCGAGGGAAAGgtacctc
cctccctccctccctccctccctccctcccttcctcccctccatccgtgg
gcgtttcgtctcattcggcgtatcatctttccttcccctccctccctccc
tccctccctcccgcccaagGTTCGGTCAAGGAGGGCGCTCGTGGACGGAT
GGCCAGCTCCAGCGCAAACAAAGACTTGCAAGACGAGgtgcctcccttcc
tcccttcctccctcccttcctccctccctccgtccctccctccttccctt
tgtcgcgcctttttcggatctttctcaacgttggactcatttctggcccg
tccctcccttcctccctccctccctcccctgtcagTACGACGACCTTCAT
GTGTACATCACGGGCGAGACAGAAGCCATCgtaagcaggaagggagggac
ggagggagggagggagggatagaaaaagggcgcgaaaagccatggaaagt
ggagtggacataatgtcctgattgcacctgttgatatctgatctcacgtc
ccctccctccctccctccctcccttcctccagGTGGAGCAGGCCTCCGAG
ATGGTGGCCAAGCTCCTGGTGCCCATCGACGACGCAGTCAACTCCCAGAA
GATGGAGgtagggagggagggagggacagagggagggagagagggggaga
gggagagagggacagagggagggaggacaacggtggagcatgtaatttca
tccataccttatcccttcttccctcccaccctccctcccgccctccaaaa
gCAACTTCGGCAGCTGGCCTTGATCAACGGCACGCTTCGAGAGGAGGAGT
ACTGCAACTTGTGCGgtacgtgaaacagcagtcgcagcagcggcagggat
gaagggagggagggagggagggaggggtgagacaacaagctcaggagaag
gggagggagggagggaaggagggatttttgactgacatgacaccccgacc
caagaaggtgttttgactgacatgacaccccgacccgtgaatggcacgac
agGCGAAAAGGGCCACCGGCAATTTGAATGCCCCACGCGACACAATACCA
AGgtagtttccgttcgctctcttttcctccctccctccctccctccctcc
ctcccacccacaaacccgaacatggaagtcctcacccctccgtccctccc
tccctcccttctccagGTGAAGATGGTGAACGTGAAGTGCGCCATCTGCG
GGGACACGTCGCATCCTACACGGGACTGTCGCATGGGCGGCCAAGCCGGA
Ggtaaggatgggaaaacagaaaagagaaggatggaagggtgaatgacgaa
attggcatgcacaaacagggccctaatcatccctttcctccatccctccc
tccctccagCCCAAGGCGGGAACAAGGAAGTTCTAGATCAAGAATATCTC
AATTTCATGGCCGAGCTCGGCGAGGGGCCCCCTCCCTCCTCCTCCTCCTC
CTCCTCAAGTGCTCCTCCCCCCCGCCCTTCCCCTCGTCAGGAATCTCCGG
CCCCTCCCTCAGCGCCCGCCTTGTCTTCCTCCTCGTCCTCTTCCTCCTCG
TCCTCCTCCTCCTACTACGGCGCACAAAAGACAGCAGGCGAGGCAGGTCA
CTCTGCGCCCCAGCACCACCAGCAGCAGCAGCCAAGTGCTGCCTCCTCTC
CTTACTATCGAACATCAGAAGCAGCAGTAGGGACAACAGCAGCAGCCACA
GGAGCTGCAGCCGGAGGGACGTACGCTTACTCTACCAACCACCACAATCC
TTATTCTGCTGCTCCTGCTGCCTCGTATGGAGGGAACTCTTTGGGAGGAT
ACGACTACTCCACTTTCTACAGTCAACAAGCCGCGGCTGCCTCTTACTAC
ACACAACCGTACCAGCACCAGCACCAGCACCAGCACCAGCAATACATGTA
TGCCGCCTACCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCTCGG
GTCCGGGGGGGCTGCCCCCTCCCCCGCCCCCGCCACCGCCACCGCCTGAG
ACGGCCTAG
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protein sequence of NO02G05970.2

>NO02G05970.2-protein ID=NO02G05970.2-protein|Name=NO02G05970.2|organism=Nannochloropsis oceanica|type=polypeptide|length=711bp
MASDGGNADTYAYEEEQERKALLQSLYGPMKTWFHGGEASSIKERFGPYP
SFWQDLLTWEHTRVVQKLYLRWMDTGASGEDLLGILGDTKKEVTVEVVEA
AAGTNEGGKEGGGEVGGEDRHVNGGAGNGGGRSSSALTEEQQQQEEQKEQ
EQEQEHEEKKAEEKEKRRKSRWGGGEGETGTLTAAATTAAGESKRRSRWG
DGGGATGEAGNKKKSRWSQPEAPPGAALDPETLQEIIALQLRLDNIHQRT
ATVVMDALAKESDPDKSPSPPPIYDGQGKRQNTREERMRASLKVERQEVI
ERLLKINPLFRPPADYVRQKPSRRLYIPIKEFPTYNFIGLIIGPRGATQK
QMEKDTGAKISIRGKGSVKEGARGRMASSSANKDLQDEYDDLHVYITGET
EAIVEQASEMVAKLLVPIDDAVNSQKMEQLRQLALINGTLREEEYCNLCG
EKGHRQFECPTRHNTKVKMVNVKCAICGDTSHPTRDCRMGGQAGAQGGNK
EVLDQEYLNFMAELGEGPPPSSSSSSSSAPPPRPSPRQESPAPPSAPALS
SSSSSSSSSSSSYYGAQKTAGEAGHSAPQHHQQQQPSAASSPYYRTSEAA
VGTTAAATGAAAGGTYAYSTNHHNPYSAAPAASYGGNSLGGYDYSTFYSQ
QAAAASYYTQPYQHQHQHQHQQYMYAAYPPPPPPPPPPPPSGPGGLPPPP
PPPPPPPETA*
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protein sequence of NO02G05970.1

>NO02G05970.1-protein ID=NO02G05970.1-protein|Name=NO02G05970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=639bp
MDTGASGEDLLGILGDTKKEVTVEVVEAAAGTNEGGKEGGGEVGGEDRHV
NGGAGNGGGRSSSALTEEQQQQEEQKEQEQEQEHEEKKAEEKEKRRKSRW
GGGEGETGTLTAAATTAAGESKRRSRWGDGGGATGEAGNKKKSRWSQPEA
PPGAALDPETLQEIIALQLRLDNIHQRTATVVMDALAKESDPDKSPSPPP
IYDGQGKRQNTREERMRASLKVERQEVIERLLKINPLFRPPADYVRQKPS
RRLYIPIKEFPTYNFIGLIIGPRGATQKQMEKDTGAKISIRGKGSVKEGA
RGRMASSSANKDLQDEYDDLHVYITGETEAIVEQASEMVAKLLVPIDDAV
NSQKMEQLRQLALINGTLREEEYCNLCGEKGHRQFECPTRHNTKVKMVNV
KCAICGDTSHPTRDCRMGGQAGAQGGNKEVLDQEYLNFMAELGEGPPPSS
SSSSSSAPPPRPSPRQESPAPPSAPALSSSSSSSSSSSSSYYGAQKTAGE
AGHSAPQHHQQQQPSAASSPYYRTSEAAVGTTAAATGAAAGGTYAYSTNH
HNPYSAAPAASYGGNSLGGYDYSTFYSQQAAAASYYTQPYQHQHQHQHQQ
YMYAAYPPPPPPPPPPPPSGPGGLPPPPPPPPPPPETA*
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Synonyms
Publications