|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr2 | genome | chr2:1588473..1591996 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO02G05960 vs. NCBI_GenBank
Match: EWM30060.1 (hypothetical protein Naga_100170g8 [Nannochloropsis gaditana]) HSP 1 Score: 79.3 bits (194), Expect = 7.900e-11 Identity = 53/130 (40.77%), Postives = 67/130 (51.54%), Query Frame = 0
Query: 924 TLVFASLLLTHPLLALHLHN--PFRPSSFSLGCP----DETGMQGKLLWPPSLVWLLVVCLFLWLVASDRHIQAVFGFVPLGRELWGAVGLSAVGGTTVWMEVGKCGIWCVGRQRRVRWGVGGSEGAREG 1048
TL+F SLLL HPLLALHLH+ + PS ++ P M+G++ + L WL FL LVA D Q G VP+ +LW V S V VWM VG C +WCV R G +G R+G
Sbjct: 118 TLLFTSLLLAHPLLALHLHHFLGYIPSRTNICFPWWSFTFPKMKGRVGYYWCLAWLTASFAFLLLVALDVRTQTALGLVPMPLKLWEVVLGSVVLALGVWMHVGMCAVWCVER------GEDREDGERKG 241
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05960 ID=NO02G05960|Name=NO02G05960|organism=Nannochloropsis oceanica|type=gene|length=3524bp
ATGTGGGCACAAACCCTCGCTATCGGGGCGTGGGACTACGGTAGAAGGAG
GGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGAGGGTGGGAT
TGAGGGAGGGGGACGGGGTGGGGGCGATGGAGAAGCTGGCGTTGATGGAG
GCGGTGGTCTTAAACAGAGCGGGAACGCTAACAGAGGCTGTACCTACCTT
TCACTCTCTCTCTGTGATGCTCGGCCAGGGTGGGTCGCGGGCGTGGGGAG
GACAGGTGGGAGGACTGGAAGGACTGAAGGCCTTGATGAGGCCCCGGTGG
CAGACGCGGCGAAGGATGTCTCCTTCCAGCCAAGTGGAAGGGAAGGGGAG
GAAAGAGGGAGGGAAGGAGGGGGAGGACGATAGTGAGGCAGAGGAGGAGG
AGGACAGAAACCGCTTATTGGAGCTGCTGCAGGGCTGGCTGATGACGTCC
AGCTTGGGAGATGACGCCATGCGGAAAGAGCAGCACCACCGTCGAAATCG
CCGCCTGGATAGGAGAAAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
ACTGCTACTCTCATCTTCCCACGACCCGGGAAAGCATGGTCCATATCCTT
GGAGACATGCTCAATCTCGATAAAGAGTGGGAAGGACTTCATCCCTTCGA
CCAAGCCCTCTTCTCCGCCTTAGCCTCCTCCTCCCCGGCCTCCCTCCCTC
CCTCCTCGCCCCCCCTCACTTCTCCCTCCTCCGCCTTCTCCCCTGTATTC
CACCACGAGCCGCCTCCACCCACGCCGGCGTTGTCCTTGCAGCCACCCTG
TCACACCACCTCCCTCCCGACCAGCACCAGCACCACCGCCAGCACCTTTA
GCGACAATGTGGACCCCGGGCATGTTCAGCTCACTCCCCCTTCTGCCCCT
CCCGCCCGCACTCCCTCCCTCCCTCCACGCCCCACCGACCTGCCTCCGGC
GATAGTGTCGATGATTCTAGGAAAAATAAGGGGGGAGGCGCGCCTGGTCT
CATACGCTCCTTTCGATCCGCAGGCGGGGTTCGAGGCAAGGACGTTCGCA
TGGAAGGAGGACGGGAGGGAGGGAGAGGGAGAAGGAGGAGGAGGAGGAGG
AGGGAAAGTGGTGTACAAAACATTTTTTCGCGCCACCCCGGAGGCATTGC
TAGCACGGTGTGAGGAGGTGGGAGGGGAGGGGGGAAGCAATGAGGACATG
AAGAAGGAGGGCGACCTGCAAAATCGGAGGAGCAGCAGCAGCAGTAGCAG
CAGCAGCAGGAGGCGTCTCACCCCCGCCCTCCGTCATGATCTTTATCAAG
CTCTAGCTGAGCTGGCAAGTCAGGACGGATGTACGTTGGTAGGAGTGGCG
GTGAAGGAGGAGGATGATACATACGAAGAGCGGCTCGGGAGGGCGAGGGA
GGAGCAGCTGCTGGCTCCTTCCCCCCCTCCCCCTGACATGCCTTTGCCAG
CCGGAGAAAAGAAGGGAAAGGAGGGACAGAAGGGGGAGAGTAAGGAGGAG
ACAGAGGATGAAGAAGGGAAGGAGGAAGGGGGACAGCCGCAGCTTTCTCG
CACGGGGAGTTGGGATTACTATCCTGCGGTTCCCCCCTCTCTCCGTGGAG
GGGGAGGGCGGGAGGTCAGTGGAAGAGGGGGCAGAGGAGTAGGAGACGAG
AGGAGAGAGATGTCGGTCATAGGTGGAGTGGGTGCGAGCTTGGTGAGGGC
GACGCCTGAGCGCTTGAAGGGGGCAAGACTTCTGGGAATGTGCGCCTTTG
TCCACCCCCTCGTGGAGGGGGTGAAAGAGGCGGTGCAGGGTTTGAAAGGG
AGCGAGGGAGAGAGGGAGGGGAGGAGGAGAAGGAGAAGAAGAGGGAGGAG
GAGGAAGGTGGTGTTGGTGACGGGAGAGGGGAAGGAAGCGGCGGAGGCTC
TGGGGAGGAAGGTGGGATTGGTGGAGGAGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGTGGTGTGTGCGCCGGAGGTGCAAGGCCCCCTTCTCTCGCT
GATTTTACATGAGGAAGCAAAGGTGTCAGTGATCTGCCGGGCGTCAGGTC
AGGATCGAGTGCAGGTGGTTCAGGCGTTAGAAGATGGGGAGAGGGAAGGG
AGGGAAGGAGGGAGGGAGGGAGGGAGAAGGGTGGTGGGTGTGACGGGCAA
TTTCGCCGCGGCGGTGCCTGCTTTGGAGTGGCCGTCGTCGCTGGGAGTGG
TGCTGGAGGGACGAGGGATCTACCGACAGACCCCGGGAAGGCAGGGCACC
GGTATCATGAGGGAAATAGCCACGGCAATGGCGATATCAAGCAGGGATGA
TTCTATGGAGGAGGAGGAGGGAGGAGAAAGAAGAGGAGGGAGGGCCGCGG
GGTCATGCCAGCCAGCAGGGCAGGAGAAGAGCAACAAAACCCTTCAGTCT
TTCCATGCAGTCACTGACGTCGCTAGGCGCGCTGCCGACCTGGTGCTGCT
CGAGGGGGACCTCTCCTCCTTCTCCTCCGCCGCTGCCACCGCCAGGCGCC
TCCTACACAATGCCCAAGTTGCTGCCGTCCACACCTTAGCATGTCACTTC
TCCCTCGCCCTGCTCTGGTTGCCGTTGTTGTGGCTGGCGCAGAGGAGGGA
GGGAGGGAGGGAGGAGGGGGGGGTGTCGAACTTGCCTCTCGCGCCGGTGC
AGGTGTTAGTCCTAGAGGCTTATCGGATGGCCGGGGCCAGGGCAGCGCTG
GCAGGGGGGAGGAAGTGGAGGAGGAGGAGGAAGAGAAGGAGGAGGATGAA
AGGGGCGTGGGAATTTCCGgtaatgctgcaaattacctttcatgcgaggg
taccagtagtgcagtctccttcccctccttctcctccttctcctcctcct
cctcctcctccttgtcgtcctcttcggctgctgctggtcggcactttttg
agcgcaagtcacctctctctcgcctttactggcatcctttccattatcac
tgccgtgattcttcctcttctctacaacgaaatgatcctcccaccttccc
aagaagccgacagctttccctccccttctctgcgtcgacagACTCTGGTC
TTTGCCTCTCTCCTCCTCACCCACCCCCTTCTGGCCCTACACCTTCACAA
TCCCTTCCGTCCCTCCTCCTTCTCCCTCGGCTGCCCCGATGAGACGGGAA
TGCAAGGAAAGTTGTTGTGGCCACCCTCTTTAGTCTGGTTGTTGGTGGTC
TGCCTCTTCCTCTGGCTCGTGGCATCAGATCGGCACATTCAGGCGGTCTT
CGGCTTTGTCCCCTTGGGACGGGAATTGTGGGGTGCGGTAGGCCTGTCTG
CAGTAGGAGGGACGACGGTTTGGATGGAGGTGGGGAAATGTGGAATCTGG
TGCGTGGGAAGGCAGAGGAGAGTGAGGTGGGGGGTGGGAGGGAGCGAGGG
AGCGCGGGAGGGAGGAGGAAGAGAGGATATGGAACCATGCGGGGGCGGGG
AAGTGGTGAAGGAGAGGAAGGAGAAAGAGGAAGAGGAAGCGTTAATCTTG
ATGGTGGCGGTGGTAGTAGAATAG back to topprotein sequence of NO02G05960.1 >NO02G05960.1-protein ID=NO02G05960.1-protein|Name=NO02G05960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1084bp
MWAQTLAIGAWDYGRRREGGREGGREGGRARVGLREGDGVGAMEKLALME
AVVLNRAGTLTEAVPTFHSLSVMLGQGGSRAWGGQVGGLEGLKALMRPRW
QTRRRMSPSSQVEGKGRKEGGKEGEDDSEAEEEEDRNRLLELLQGWLMTS
SLGDDAMRKEQHHRRNRRLDRRKRGGGGGGGGGDCYSHLPTTRESMVHIL
GDMLNLDKEWEGLHPFDQALFSALASSSPASLPPSSPPLTSPSSAFSPVF
HHEPPPPTPALSLQPPCHTTSLPTSTSTTASTFSDNVDPGHVQLTPPSAP
PARTPSLPPRPTDLPPAIVSMILGKIRGEARLVSYAPFDPQAGFEARTFA
WKEDGREGEGEGGGGGGGKVVYKTFFRATPEALLARCEEVGGEGGSNEDM
KKEGDLQNRRSSSSSSSSSRRRLTPALRHDLYQALAELASQDGCTLVGVA
VKEEDDTYEERLGRAREEQLLAPSPPPPDMPLPAGEKKGKEGQKGESKEE
TEDEEGKEEGGQPQLSRTGSWDYYPAVPPSLRGGGGREVSGRGGRGVGDE
RREMSVIGGVGASLVRATPERLKGARLLGMCAFVHPLVEGVKEAVQGLKG
SEGEREGRRRRRRRGRRRKVVLVTGEGKEAAEALGRKVGLVEEREGGREG
GREVVCAPEVQGPLLSLILHEEAKVSVICRASGQDRVQVVQALEDGEREG
REGGREGGRRVVGVTGNFAAAVPALEWPSSLGVVLEGRGIYRQTPGRQGT
GIMREIATAMAISSRDDSMEEEEGGERRGGRAAGSCQPAGQEKSNKTLQS
FHAVTDVARRAADLVLLEGDLSSFSSAAATARRLLHNAQVAAVHTLACHF
SLALLWLPLLWLAQRREGGREEGGVSNLPLAPVQVLVLEAYRMAGARAAL
AGGRKWRRRRKRRRRMKGAWEFPTLVFASLLLTHPLLALHLHNPFRPSSF
SLGCPDETGMQGKLLWPPSLVWLLVVCLFLWLVASDRHIQAVFGFVPLGR
ELWGAVGLSAVGGTTVWMEVGKCGIWCVGRQRRVRWGVGGSEGAREGGGR
EDMEPCGGGEVVKERKEKEEEEALILMVAVVVE* back to top
|