NO02G05940, NO02G05940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05940 vs. NCBI_GenBank
Match: EWM30063.1 (protein of unknown function DUF4149 [Nannochloropsis gaditana]) HSP 1 Score: 330.9 bits (847), Expect = 3.100e-87 Identity = 169/221 (76.47%), Postives = 191/221 (86.43%), Query Frame = 0 Query: 1 MATYHSLVIMASACLLVFLGSTIEATSTTHPYASFIHLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFADTTSKEGRSPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSKHVTFAIMAPAV-KASFWGW 221 MATYH+LV++ASAC+L+FLG+T EATSTTHPYASFIHLASVGAWFGIS WVTFVAGVLL++YLPRH FG VQ KIFPY+F +SLV TSLALASW HLEG DLLA K+G ED V+ LGGAA+LSALQL+VLGP VTKAM ARNK EKEEGFADTTSK GRSP+LL LG +FAR+HG+SSTANLL+FL A+ LYVLS+KHVTFA MAP V KA+FW W Sbjct: 1 MATYHALVVLASACMLIFLGTTTEATSTTHPYASFIHLASVGAWFGISFWVTFVAGVLLFKYLPRHQFGSVQGKIFPYYFALSLVLTSLALASWVHLEGGLDLLAAIKSGNEDGKVVACLGGAALLSALQLLVLGPCVTKAMEARNKKEKEEGFADTTSKVGRSPELLQLGAEFARMHGLSSTANLLVFLGALFQLYVLSAKHVTFATMAPTVAKATFWPW 221
BLAST of NO02G05940 vs. NCBI_GenBank
Match: XP_005854323.1 (hypothetical protein NGA_0208801 [Nannochloropsis gaditana CCMP526] >XP_005854851.1 hypothetical protein NGA_0208802 [Nannochloropsis gaditana CCMP526] >EKU21505.1 hypothetical protein NGA_0208802 [Nannochloropsis gaditana CCMP526] >EKU22038.1 hypothetical protein NGA_0208801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 330.1 bits (845), Expect = 5.300e-87 Identity = 169/221 (76.47%), Postives = 190/221 (85.97%), Query Frame = 0 Query: 1 MATYHSLVIMASACLLVFLGSTIEATSTTHPYASFIHLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFADTTSKEGRSPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSKHVTFAIMAPAV-KASFWGW 221 MATYH+LV++ASAC+L+FLG+T EATSTTHPYASFIHLASVGAWFGIS WVTFVAGVLL++YLPRH FG VQ KIFPY+F +SLV TSLALASW HLEG DLLA K+G ED V+ LGGAA+LSALQL+VLGP VTKAM ARNK EKEEGFADTTSK GRSP+LL LG FAR+HG+SSTANLL+FL A+ LYVLS+KHVTFA MAP V KA+FW W Sbjct: 1 MATYHALVVLASACMLIFLGTTTEATSTTHPYASFIHLASVGAWFGISFWVTFVAGVLLFKYLPRHQFGSVQGKIFPYYFALSLVLTSLALASWVHLEGGLDLLAAIKSGNEDGKVVACLGGAALLSALQLLVLGPCVTKAMEARNKKEKEEGFADTTSKVGRSPELLQLGAAFARMHGLSSTANLLVFLGALFQLYVLSAKHVTFATMAPTVAKATFWPW 221
BLAST of NO02G05940 vs. NCBI_GenBank
Match: KLO20462.1 (hypothetical protein SCHPADRAFT_897741 [Schizopora paradoxa]) HSP 1 Score: 102.8 bits (255), Expect = 1.400e-18 Identity = 67/162 (41.36%), Postives = 94/162 (58.02%), Query Frame = 0 Query: 36 IHLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASW--AHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFADTTSKEGRSPQLLALGKKFARVHGMSSTANLLIFLAAIMH 196 +++ S G+S WVTF GV+ YR LPR FG +Q + FP +F +S+ +S LA+W AH + +T+ + D +VLG A+L +GP +K M R+KLEKEEG A + EG S ++ AL +KFA++HG SS ANL FLAA H Sbjct: 21 LYMFSYSWLLGMSFWVTFFGGVIAYRALPRQQFGALQHRTFPVYFVISISLSSGLLAAWTLAHPDIMTNYTSFR---NPDVAQAYVLGTIAILQGFNQFWVGPLTSKTMFQRHKLEKEEGKA--YNDEGVSDEMKALNRKFAQLHGWSSLANLYAFLAAAFH 177
BLAST of NO02G05940 vs. NCBI_GenBank
Match: XP_007359865.1 (hypothetical protein DICSQDRAFT_46861 [Dichomitus squalens LYAD-421 SS1] >EJF66433.1 hypothetical protein DICSQDRAFT_46861 [Dichomitus squalens LYAD-421 SS1]) HSP 1 Score: 100.1 bits (248), Expect = 8.900e-18 Identity = 61/157 (38.85%), Postives = 93/157 (59.24%), Query Frame = 0 Query: 45 FGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTS--LALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFADTTSKEGRSPQLLALGKKFARVHGMSSTANLLIFLAAIMH-LYV 199 FG++LWVTF+ GV+ ++ LPR FG +Q + FP +F +S+ +S LAL +W+H +T L A D + + L + + V+GP +K M R++LEKEEG A ++ G S Q+ +L K F ++HG+SS ANL F A + H LY+ Sbjct: 30 FGMTLWVTFIGGVIAFKVLPRQQFGNLQHRTFPIYFSISIALSSGLLALWTWSHPLVLTHYLQPAV---ADVSQAYTLASVLLSQVVNYFVIGPLTSKTMFQRHRLEKEEGKA--YNEPGVSEQMKSLNKTFGQLHGLSSLANLTAFFALVFHGLYI 181
BLAST of NO02G05940 vs. NCBI_GenBank
Match: XP_021904347.1 (transmembrane protein 205 [Carica papaya]) HSP 1 Score: 99.8 bits (247), Expect = 1.200e-17 Identity = 69/191 (36.13%), Postives = 107/191 (56.02%), Query Frame = 0 Query: 20 GSTIEA--TSTTHPYASFIHLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFAD----TTSKEGR--SPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSK 203 GST E +S Y +HL S +G +LWVTF+ G+++++ LPRH FG +QSK+FP +F + V +L++A++ + ATA E + F+L G A + L V P + M R+K+E+E+ D T +KE +PQL A+ KKF +HG+SS AN++ F + MH + L+ K Sbjct: 26 GSTSEGQNSSKLSVYLKLVHLLSFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCALSVAAFGYSHPWKS-SATA----EKYQLGFLLSGFA-FNLTNLFVFTPMTIEMMKKRHKVEREQNIGDEIGWTKNKEVAKVNPQLAAMNKKFGMIHGLSSLANIMAFGSLAMHSWYLAGK 210
BLAST of NO02G05940 vs. NCBI_GenBank
Match: XP_006444466.1 (transmembrane protein 205 isoform X2 [Citrus clementina] >XP_006492313.1 PREDICTED: transmembrane protein 205 [Citrus sinensis] >ESR57706.1 hypothetical protein CICLE_v10022218mg [Citrus clementina] >KDO87038.1 hypothetical protein CISIN_1g028150mg [Citrus sinensis] >GAY41053.1 hypothetical protein CUMW_056480 [Citrus unshiu]) HSP 1 Score: 99.4 bits (246), Expect = 1.500e-17 Identity = 63/183 (34.43%), Postives = 102/183 (55.74%), Query Frame = 0 Query: 26 TSTTHPYASFIHLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFAD----TTSKE--GRSPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSK 203 +S P+ HL +G +LWVTF+ G+++++ LPRH FG +QSK+FP +F + V S+A+AS+A+L + + E + F+L A + L V P + M R+K+E+EE D T ++E +P+L A+ KKF +HG+SS AN++ F + MH + L+ K Sbjct: 34 SSKLSPFLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHP-----WKSSSTAEKYQLGFLLSAFA-FNLTNLFVFTPMTIEMMKQRHKVEREENIGDEVGWTKNREVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAGK 210
BLAST of NO02G05940 vs. NCBI_GenBank
Match: OVA16816.1 (protein of unknown function DUF4149 [Macleaya cordata]) HSP 1 Score: 99.0 bits (245), Expect = 2.000e-17 Identity = 61/172 (35.47%), Postives = 97/172 (56.40%), Query Frame = 0 Query: 37 HLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEE------GFADTTSKEGRSPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSK 203 HL S FG +LWVTF+ G+++++ LPRH FG +QSK+FP +F M V ++++LAS+ +L + + E + F+L A + L V P + M R+K+E+EE G++ +P+L A+ KKF +HG+SS AN+L F + MH + L+ K Sbjct: 45 HLLSFSTSFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSMVTVCSAISLASFGYLHP-----WKSSSSAEKYQLGFMLSSFA-FNLSNLFVFTPMTIEMMKQRHKVEREENIGEEVGWSKNRDVAKVNPKLAAMNKKFGMIHGLSSLANILSFGSLAMHSWYLAGK 210
BLAST of NO02G05940 vs. NCBI_GenBank
Match: XP_006855302.1 (transmembrane protein 205 [Amborella trichopoda] >ERN16769.1 hypothetical protein AMTR_s00057p00058340 [Amborella trichopoda]) HSP 1 Score: 97.8 bits (242), Expect = 4.400e-17 Identity = 65/204 (31.86%), Postives = 111/204 (54.41%), Query Frame = 0 Query: 8 VIMASACLLVFLGSTIEATSTTHPYASFI---HLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFAD----TTSKE--GRSPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSK 203 V+ A +VF T +T+ + +S + HL S +G +LWVTF+ G+++++ LPRH FG +QSK+FP +F V ++++A++A+L G + L L + + + L + P + M R+K+E+EE D T ++E ++P+L A+ KKF +HG+SS AN+L F + MH + L+ K Sbjct: 10 VVTFFAIGIVFSSQTFTSTNPSGVISSSLKLAHLLSFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSTVAVCGAISVAAFAYLH------PWKSASGTEKLQLGFLSSSFLFNLTNLFIFTPMTIEMMKQRHKVEREEAIGDEIGWTKNQEVAKKNPKLAAMNKKFGMIHGLSSLANVLSFGSLAMHSWYLAGK 207
BLAST of NO02G05940 vs. NCBI_GenBank
Match: XP_019429152.1 (PREDICTED: transmembrane protein 205-like [Lupinus angustifolius]) HSP 1 Score: 97.8 bits (242), Expect = 4.400e-17 Identity = 64/191 (33.51%), Postives = 100/191 (52.36%), Query Frame = 0 Query: 21 STIEATSTTHPYASFIHLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLG---GAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFADTTSKEGR------SPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSK 203 S +AT+ + Y HL S FG +LWVTF+ G+++++ LPRH FG +QSK+FP +F + V ++++AS+ +L T + F LG A + LVV P + M R+K+E+E D + +P+L A+ KKF +HG+SS AN+L F + MH + L+ K Sbjct: 27 SNSDATNVS-TYLKLAHLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCAISVASFGYLHPWKTSSPTQR---------FQLGFLLSAFAFNLTNLVVFTPMTIEMMKQRHKVERENNIGDEVGRSKNVEVAKSNPKLAAMNKKFGMIHGLSSLANILSFGSLAMHSWYLAGK 207
BLAST of NO02G05940 vs. NCBI_GenBank
Match: XP_002967473.1 (transmembrane protein 205 [Selaginella moellendorffii] >EFJ32072.1 hypothetical protein SELMODRAFT_169057 [Selaginella moellendorffii]) HSP 1 Score: 97.4 bits (241), Expect = 5.700e-17 Identity = 62/173 (35.84%), Postives = 94/173 (54.34%), Query Frame = 0 Query: 36 IHLASVGAWFGISLWVTFVAGVLLYRYLPRHLFGEVQSKIFPYFFGMSLVFTSLALASWAHLEGVTDLLATAKNGGEDATVLFVLGGAAMLSALQLVVLGPSVTKAMNARNKLEKEEGFAD----TTSKEG--RSPQLLALGKKFARVHGMSSTANLLIFLAAIMHLYVLSSK 203 +HL +G SLWVTF+ G++++++LPRH FG +QSK+FP +F M LA+ S A + + L + + L L + M + L L+V P K M R+K+E+EE + + +KE R+P L + KKF VHG+SS ANL F +H + L+ K Sbjct: 47 VHLLGFATAWGTSLWVTFIGGIIMFKHLPRHQFGNLQSKLFPVYFEM------LAVCSTACIGAFSLLHPWGSSTSAEKMQLGALVFSLMATLLNLLVFEPMTIKTMKERHKIEREESIGEEVGLSKNKEAAKRNPALAKINKKFGMVHGLSSLANLFCFGGFAVHSWYLAGK 213 The following BLAST results are available for this feature:
BLAST of NO02G05940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05940 ID=NO02G05940|Name=NO02G05940|organism=Nannochloropsis oceanica|type=gene|length=1492bpback to top protein sequence of NO02G05940.1 >NO02G05940.1-protein ID=NO02G05940.1-protein|Name=NO02G05940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bpback to top Synonyms
Publications
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