NO02G05750, NO02G05750 (gene) Nannochloropsis oceanica

Overview
NameNO02G05750
Unique NameNO02G05750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2288
Alignment locationchr2:1532921..1535208 +

Link to JBrowse

Properties
Property NameValue
DescriptionSpindle assembly abnormal protein 6
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1532921..1535208 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032396SAS-6_N
Homology
BLAST of NO02G05750 vs. NCBI_GenBank
Match: EWM30093.1 (spindle assembly abnormal protein 6 [Nannochloropsis gaditana])

HSP 1 Score: 473.0 bits (1216), Expect = 1.500e-129
Identity = 376/688 (54.65%), Postives = 432/688 (62.79%), Query Frame = 0
Query:    1 MAPPSAAFTSFSSSMQGNRGDSCIRGSSGINAAFDRANPLFEATLRVEVCRADSDAGQSH-QEGSSEVLPLTLRVLTGTALPFDAPSQRY--CGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGCRVMPSSSSPSSLPPSST-----AELRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHLTLLHADSTHAHLSISSLLSHEQARAHSLSLQLSQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQHRLSMSVQENGRLTQELREMKVALEEAKRENESNQQVITWLNKEINDLQLGRGSSGLMYAMTGGGGXXXXXXXXXXXPSTSSSTAASVATFIPSYQHTTPTKGKGGQSVHVTPSSVAVPVSMVKXXXXXXXXXXXKEPMQHEK----VNMSASSLESASSTHYLDALGLSDPYQ 677
            MAP S      S  +  +RG    R S   N  F+RANPLFE TL +EVCR      Q+  QE S E++PLTLRVLTGTA      S +     R+E VLRIEITQ   D+  +E AG   ++ A++YFLY+LDVSE++YP LKRDQSLLVDF  FP+ FI LV  CRV  SS++ S    +++     AE+ P Y ARLT+                   FAIVEAT FKEL+HLSL+FCPPTDH LK +LATRL+HLT LHA +   H S+S +LS EQAR  SL+  LS L+                                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EGLLQ+L GQ +VL +TKALQ  AEG R+RMEEALELYKNNAL LQEKLE+SVGEIQKGN II KLQ + Q LRGK+KTKNEVL+KQEALLVEG+RGQDAG HRLS  VQENGRLTQEL  +K ALEE++RENESNQQVITWLNKEINDLQLGRGS GLM+A  GG                +SSTAASVATFIPSY   TP K +G         S A P S V+           K P+        VN+SASS+ +A+STHYLD LGLSDPYQ
Sbjct:    1 MAPQST-----SPRLHDSRGRGTCRSS---NVVFERANPLFEGTLDIEVCRQGMQGEQNQSQELSREMVPLTLRVLTGTANSTYTTSNQVGNYSRSEHVLRIEITQY--DNPTEEKAG--DEDAAASYFLYTLDVSESEYPILKRDQSLLVDFADFPDQFIGLVAQCRVSHSSTNASQRSSAASCDTIPAEVPPPYRARLTL----ATSSALSTSPSSSAVFAIVEATPFKELSHLSLAFCPPTDHHLKAFLATRLQHLTFLHAAAVRTHHSVSHILSEEQARNLSLTTALSSLRREKEEETGTLKRTHMEAMTTALAEHSREKDQLISRHESQMNALRKRCEETERRRMELSEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLREEGLLQKLKGQDDVLERTKALQLVAEGARRRMEEALELYKNNALALQEKLEVSVGEIQKGNMIIQKLQTETQTLRGKIKTKNEVLKKQEALLVEGRRGQDAGVHRLSAVVQENGRLTQELGALKTALEESRRENESNQQVITWLNKEINDLQLGRGSHGLMHATVGG----MEGPKYGRAKQHNSSTAASVATFIPSY--NTPAKYRG------DTISQATPKSPVESNAVDKDPHQSKSPLPRHSPSLGVNVSASSMSTAASTHYLDVLGLSDPYQ 660          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: XP_008871605.1 (hypothetical protein H310_07871 [Aphanomyces invadans] >ETV99829.1 hypothetical protein H310_07871 [Aphanomyces invadans])

HSP 1 Score: 136.3 bits (342), Expect = 3.400e-28
Identity = 185/546 (33.88%), Postives = 247/546 (45.24%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGCRVMPSSSSPSSLPPSSTAELRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRH-----------LTLLHADSTHAHLSISSLLSHEQARAHSLSLQLSQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQHRLSMSVQENGRLTQELREMKVALEEAKREN------------ESNQQVITWLNKEINDLQL 557
            FDR  PLF+  +RV V + + D   +          LT+R+L G              + ERVLRIE+T                D     +FLY   VSE ++  LK  Q LLVDF  F  +F+DL+  C   P+    SS       +    YLA L                    TF+IVE   FK LTHLSL F P  D  +K+YLA RLR            L    +D   A  S S L +     A   S QL Q +                                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          +  L QQ+  + +V+ K+  L  A+   +  +EE L +YK N  T+Q+KLE+S+ EI KGN II ++  + QA++ KL+ K+++L++Q+ ++ E +  +D   H+L     E       LR+ ++AL ++K ++             SNQQVITWLNKEIN+ QL
Sbjct:    4 FDREAPLFDGKVRVLVQQPERDDRHTF---------LTVRMLNG-------QRTLNSNQKERVLRIEVTD---------------DEELETFFLYVWSVSEEEFHDLKHQQRLLVDFPKFATNFMDLLTCCLAKPTILHESSSNHRPEGQAPLSYLAVLN-----------THDTAGHSTFSIVETNAFKRLTHLSLQFTPGDDAEVKLYLAARLRQTTHEKRRLQQDLATTTSDLNAAKKSESELKTQVDHAAQQHSEQLGQAKMAYSDEMTAQKEAALATLHETERMYSAKLESLRISSKDEIEQLQRNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKDQNKALDHDVFTKEKLLNQSDLRIAALQQQVADKEDVIQKSTELLQASSNHKLEIEETLTMYKANNSTMQQKLELSISEINKGNQIIEQMHSENQAMKAKLRMKSKILKQQDLIVQEKEHQRDQLMHQLKALKNE-----LLLRDDQIALVQSKNDDLAQKLDESNKLLASNQQVITWLNKEINEAQL 502          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: OQR84215.1 (spindle assembly protein [Achlya hypogyna])

HSP 1 Score: 136.3 bits (342), Expect = 3.400e-28
Identity = 186/563 (33.04%), Postives = 254/563 (45.12%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGC----RVMPSSSSPSSLPPSSTAELRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHLTL------------------LHADSTHAHLSISSLLSHE---------QARAHSLSLQLSQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQH-------RLSMSVQENGRLTQELREMKVALEEAKRENESNQQVITWLNKEINDLQLGR 559
            +DR  PLF+  +RV V   D D   +          LT+R+L+G              + ERVLRIEIT  DDD+               ++FLY   VSE ++  LK  Q LLVDF  F ++F+DL+  C    RV     S     P   A L   YLA L+                  G F+IVE   FK LTHLSL+F P  D  +K+YLA RLR  T+                     D   A +S+ S  + E          A+ H+  + L++++                                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   +  L QQ+  +  VL KT  L AAA   +  +EE L++YK N  ++Q+KLE+S+ EI KGN II ++Q + +A + KL+ K+++L++QE L+ E Q  +D  QH        L +   E   L +++ ++   LEE+     SNQQVITWLNKEIN+ Q+ +
Sbjct:    4 YDREKPLFDGKVRVLVQTPDRDEKHAF---------LTIRLLSG-------QRTLNSNQKERVLRIEIT--DDDE-------------LESFFLYVWSVSEEEFHDLKHQQRLLVDFPKFASNFMDLLTCCLDDNRV---KKSVDGARPEGQAPL--SYLAVLS---------TTDDANGKKGVFSIVETNPFKHLTHLSLAFKPGDDAEIKLYLAARLRQTTVGSYCYCSHEQFRQNEKRQFERDLAAASVSLQSTTASELALQKQADQVAQQHAEQMNLAKMK--FSEEMTAQREAAMKTLQETERQYTAKIDSLQAAAKDQSDKLLAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRSSSTDVSALQQQNKLLDQDVFKKDKLIAQQELQLAALQQQVIDKEHVLSKTSDLLAAANTHKHEIEETLKMYKANHASMQQKLELSISEINKGNQIIEQIQSENRAYKAKLRIKSKILKQQETLVEEKQLQRDEHQHLVKALQKDLQLKDDEIVLLQKKIDDLSRKLEESNELLASNQQVITWLNKEINEAQVSQ 519          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: XP_012205614.1 (hypothetical protein SPRG_11077 [Saprolegnia parasitica CBS 223.65] >KDO23631.1 hypothetical protein SPRG_11077 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 134.8 bits (338), Expect = 1.000e-27
Identity = 175/546 (32.05%), Postives = 231/546 (42.31%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGC--RVMPSSSSPSSLPPSSTAELRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHLT---------LLHADSTHAHLSISSLLSHEQARAHSLSLQLSQL---QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQH-------RLSMSVQENGRLTQELREMKVALEEAKRENESNQQVITWLNKEINDLQLGR 559
            +DR  PLF+  +RV V   D D           V  LT+R+L G              + ERVLRIEIT  DDD+               ++FLY   VSE ++  LK  Q LLVDF  F  +F+DL+  C        + P    P S       YLA L                   G F+IVE   FK LTHLSL+F P  D  +K+YLA RLR  T         L    ST    S S     +QA  H   L   Q+   +                                               XXXXXXXXXXXXXXXXXXXXXXXX                                             +    QQ+  +  VL KT  L  AA   +  +EE L++YK N  ++Q+KLE+S+ EI KGN II ++Q + +A + KL+ K+++L++QE L+ E Q  +D  QH        L +   E   L ++  E+   LEE+ +   SNQQVITWLNKEIN+ Q+ +
Sbjct:    4 YDRERPLFDGKVRVLVQTPDRD---------ERVALLTIRLLAG-------QRTLNSNQKERVLRIEIT--DDDE-------------LESFFLYVWSVSEEEFHDLKHQQRLLVDFPKFATNFMDLLTCCLDEKKLDGARPEGQSPLS-------YLAVLN-----------TQDEAKKGIFSIVETNPFKHLTHLSLAFKPGDDAEIKLYLAARLRQTTNEKRQYQRDLAATTSTLETTSASEAALRKQA-DHVTQLHAEQMGAAKMRFSEELTAQKEAAMKSLQDTERLYTTKIEAIQASNTDNLAKLNTKVXXXXXXXXXXXXXXXXXXXXXXXXEGHVAELTKSKELTTTDVSALQQQNKALDQDVFKKDKLIAQYELQIAAFQQQVADKEHVLSKTTDLLTAANTHKHEIEETLKMYKTNHASMQQKLELSISEINKGNQIIEQIQSENRAYKAKLRMKSKILKQQETLVEEKQLQRDEHQHLVKALQKDLHLKDDELALLQKKNDELARKLEESNQLLASNQQVITWLNKEINEAQVSQ 499          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: XP_008616548.1 (hypothetical protein SDRG_12260 [Saprolegnia diclina VS20] >EQC29981.1 hypothetical protein SDRG_12260 [Saprolegnia diclina VS20])

HSP 1 Score: 134.4 bits (337), Expect = 1.300e-27
Identity = 177/543 (32.60%), Postives = 237/543 (43.65%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGCRVMPSSSSPSSLPPSSTAELRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHLTL--------LHADSTHAHLSISSLLSHEQARAHSLSLQLSQL---QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQH-------RLSMSVQENGRLTQELREMKVALEEAKRENESNQQVITWLNKEINDLQLGR 559
            +DR  PLF+  +RV V   D D           V  LT+R+L G              + ERVLRIEIT                D    ++FLY   VSE ++  LK  Q LLVDF  F  +F+DL+  C             P   A L   YLA L                   G F+IVE   FK LTHLSL+F P  D  +K+YLA RLR  T         L A ++   ++ +S  +  +   H+  L   Q+   +                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       +    QQ+  +  VL KT  L  AA   +  +EE L++YK N  ++Q+KLE+S+ EI KGN II ++Q + +A + KL+ K+++L++QE L+ E Q  +D  QH        L +   E   L Q+  E+   LEE+ +   SNQQVITWLNKEIN+ Q+ +
Sbjct:    4 YDREKPLFDGKVRVLVQTPDRD---------ERVALLTIRLLAG-------QRTLNSNQKERVLRIEITD---------------DEELESFFLYVWSVSEEEFHDLKHQQRLLVDFPKFATNFMDLLTCCL---DEKKLDGTRPEGQAPL--SYLAVLN-----------TQDEAKKGIFSIVETNPFKHLTHLSLAFKPGDDAEIKLYLAARLRQTTNEKRQFQRDLAATTSTLDMTAASEAALRKKADHASQLHAEQMGLAKMRFSEEMTAQKEAAMKTLQDTERLYTSKMEAIQAAATDNLEKLNAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKSKEVSTTDVSALQQQNKALDQDVFKKDKLIAQYELQIAAFQQQVVDKEHVLSKTTDLLTAATTHKHEIEETLKMYKANHASMQQKLELSISEINKGNQIIEQIQNENRAYKAKLRMKSKILKQQETLVEEKQLQRDEHQHLVKALQKDLHLKDDEVALLQQKNDELARKLEESTQLLASNQQVITWLNKEINEAQVSQ 499          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: POM60363.1 (Spindle assembly protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 120.6 bits (301), Expect = 1.900e-23
Identity = 202/543 (37.20%), Postives = 271/543 (49.91%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGC-----RVMPSSSSPSSLPPSSTAELRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHL--------TLLHADSTHAHLSISSLLSHEQ---ARAHSLSLQLSQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQHRLSMSVQENGRLTQE---LREMKVALEEAKRENESNQQVITWLNKEINDLQLG 558
            FDR  PLF+    V V   D D          ++LPLT+R+LTG     +A +Q+     ERV+R+EIT   DDD  D             YFLY   VSE ++  LK  Q LLVDF TFP + I+L++ C     ++            +S      K  +   +P                  F+IVE   FK+LTHLSL F P  D A+K YLA RL  +        T L   S     +  S    +Q   A  +     LSQ +                                                  XXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +V+ KT  L  +A+   + ++E+L++Y++N   LQ+KLE+S+ EI KGN II ++Q + + L+ K++ K +++++QE  + E Q  ++     L  S +++ R   E   ++E+   LE++ +   SNQQVITWLNKEIN+ QLG
Sbjct:    4 FDRDEPLFDRRFHVLVQYPDRD---------EKLLPLTIRLLTGVR-QNNAKNQK-----ERVIRVEIT---DDDGVD------------PYFLYLWSVSEGEFHELKAQQRLLVDFATFPANLIELLQCCLKDSKKIAQEEEEKEGGEGTSMDAHNQKTRSAGPVP-LSYLAVLNTMDSNGQSVFSIVETNPFKQLTHLSLRFFPGDDAAIKAYLAARLAQVGASKRSLSTSLKQTSEELQATQKSEAKLQQQLSALGYEAESTLSQEKMKFADELEEQRRAAATALKEREDELNAKIDALVERYEKEVQILKAAAESSXXXXXXXXXXKYQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVIKKTADLLQSAKLHNEEVDESLKMYRDNHGRLQQKLELSISEINKGNEIIERIQNENRTLKSKMRMKAKIIKQQEQFVEEKQLQREEALLELK-STKDDIRKRDEHDTIKELSQKLEDSNKLLASNQQVITWLNKEINEAQLG 514          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: CCI50727.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 120.2 bits (300), Expect = 2.500e-23
Identity = 188/561 (33.51%), Postives = 260/561 (46.35%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGCRVMPSSSSPSSLPPSSTAE---------------LRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRL-----------RHLTLLHADSTHAHLSISSLLSHEQARAHSLSLQLSQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQHRLS---MSVQENGRLTQELREMKV----ALEEAKRENESNQQVITWLNKEINDLQLGRGSS 562
            +DR NPLF+  L + +   D +          + LP+T+R++ GT  P    +Q+     E++ R+E+T   DDD  D             +FLY   +SE  +  +K+ Q LLVDF  FP H I L+E C    S+ + +S      AE                      R   P                  F+IVE   FK LTHLSL F    D A+K YLA RL           + LT       H   +   L    +      S+ +S+                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                             E L QQL  + +VL KT  L   A   +++++E+L +Y++N   L +KLE+SV EI KGN II ++Q ++Q LR KLK + +++++QE LL E +R Q   +H+L    + +Q+      +L++  +     LE++ +   SNQ+VI WLNKEI + Q+    S
Sbjct:    4 YDRGNPLFDQRLNILIQSVDRE---------EKTLPITVRLVLGTR-PHAITNQK-----EKIFRVELT---DDDGID------------PFFLYLWSISEEQFHDVKQQQRLLVDFENFPIHLISLLECCLKNDSTCNEASKQEVKDAESDDIGSSPILSNMETFNCHRRKRSHGPEPLSYLAVLNISEDATSMFSIVETNIFKHLTHLSLPFQAGNDDAVKRYLAARLCQRNSEKIRMNKSLTEALEQLKHFKETTKQLEKTLEDLERKHSIHISEETIRFTEQLHSQREKAAKNLTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCEENQRERDILDKTLVDLRTMNKELDHRVFTQEKTITQLEVRHEALNQQLCDKEQVLTKTSQLLDGAHDHKQQVDESLRMYRDNHAILHQKLEVSVAEINKGNEIIEQMQKEIQNLRLKLKNRIKIIKQQEQLLQETRRNQSDDKHQLEGLRVEIQKRNEQILQLKDKNIDLIRKLEDSNKVLSSNQKVIQWLNKEITETQMAAHKS 534          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: CCA16955.1 (spindle assembly protein putative [Albugo laibachii Nc14])

HSP 1 Score: 117.5 bits (293), Expect = 1.600e-22
Identity = 160/548 (29.20%), Postives = 238/548 (43.43%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGC---RVMPSSSSPSSLPPSSTAEL----RPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHLTL----LHADSTHAHLSISSLLSHEQARAHSL-------SLQLSQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQHR---LSMSVQENG----RLTQELREMKVALEEAKRENESNQQVITWLNKEINDLQL 557
            ++R  PLF+  L + +           +E   + LP+T+R+LTG+  P    +Q+     E+VLR+E+T   DDD  D             YFLY   +SE ++  +K+ Q LLVDF  FP H I+L+E C    +   S +      + +  L          R   P                 TF++VE   FK LTHLSL F    D A+K YLA+RL    L    L    TH    +       +    SL       S+Q SQ                                                                            XXXXXXXXXXXXXXXXXXXXXXXXX                 ++ L QQL+ + +VL KT  L   A+  + +++E+L +Y++N   L +KLE+SV EI KGN +I ++Q ++Q LR K K++ +++++QE    E ++     +H+   L + +Q+       L ++  ++   LE++ +  ESNQQVI WLNKEI + Q+
Sbjct:    8 YNRETPLFDQRLTILL---------QSKEKEEKQLPITVRLLTGSR-PHAISNQK-----EKVLRVELT---DDDGID------------PYFLYLWSISEEEFHEVKQQQRLLVDFENFPIHLINLLECCLKTELKLQSCTDKQAEDAESDNLLVVENSSRQKRSFGPEPLSYLAVLNVSESDISTFSVVETNIFKHLTHLSLPFQAGNDEAVKSYLASRLCQRNLEKRRLIGTLTHTREQLKHFRDQNKKLERSLEDVERKHSVQSSQEAMRFTEEIHSQREKAAIMLKELETEHAKKVDSLLEKYEHEASELRIKVQEQEKELHALTKTNYQQSVKADQLSTQXXXXXXXXXXXXXXXXXXXXXXXXXDHRVFTQEKSITQMEIRLQALSQQLDDKDQVLMKTSQLLEGAQAQKHQVDESLGVYRDNHAILHQKLELSVAEINKGNEVIEQMQKEIQNLRQKAKSRVKIIKQQEQ---EARQSTGDNRHQMEDLRIDLQKRDEHILHLEEKNSDLMRKLEDSNKVLESNQQVIQWLNKEITETQM 522          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: XP_002998173.1 (spindle assembly protein, putative [Phytophthora infestans T30-4] >EEY70519.1 spindle assembly protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 109.0 bits (271), Expect = 5.800e-20
Identity = 189/547 (34.55%), Postives = 251/547 (45.89%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGC---------RVMPSSSSPSSLPPSSTAELRPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHLTLLHADSTHAHLSISSLLSHEQARAHSLSLQLSQL------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQHRLSMS-------VQENGRLTQELREMKVALEEAKRENESNQQVITWLNKEINDLQLGR 559
            +DR  PLF+    V V   D D          ++LPLT+R+LTG     +A +Q+     ERV+R+EIT                D+ A  YFLY   VSE ++  LK  Q LLVDF TFP + I+L++ C                  SS+    +    P  L+ L +                   F+IVE   FK+LTHLSL F P  D A+K YLA RL  +         +    +  L   Q     L  QL+ L                                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             V+ KT  L  AA+   + ++E+L++Y++N   LQ+KLE+S+ EI KGN II ++Q + + L+ K++ K +++++QE  + E Q  ++     L  +                          ++ +   SNQQVITWLNKEIN+ QLGR
Sbjct:    4 YDREAPLFDRRFHVLVQYPDRD---------EKLLPLTIRLLTGVR-QNNAKNQK-----ERVMRVEITD---------------DDGADPYFLYLWSVSEEEFHELKAQQKLLVDFATFPANLIELLQCCLKDSKAIVQEDAEKEQKRSSIDAQHSRSAGPIPLSYLAV--------LNTSDSDGMSVFSIVETNPFKQLTHLSLRFYPGDDAAIKAYLAARLAQVGASRRSLATSLKQTTEELQGTQKSEAKLQQQLAALGYEAESTLSQEKMKFADELETQRRAATSALKQREDELNAKIDVLVERYEKEKTAEASEAQVQELSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVKKTTDLLQAAKVHSEEVDESLKMYRDNHARLQQKLELSISEINKGNEIIERIQNENRTLKAKMRMKVKIIKQQEHFVEEKQLQREEALLELKSTKXXXXXXXXXXXXXXXXXXXXXXXXXDSNKLLASNQQVITWLNKEINEAQLGR 512          
BLAST of NO02G05750 vs. NCBI_GenBank
Match: POM64791.1 (Spindle assembly protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 108.2 bits (269), Expect = 1.000e-19
Identity = 192/552 (34.78%), Postives = 256/552 (46.38%), Query Frame = 0
Query:   34 FDRANPLFEATLRVEVCRADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIEITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDFTTFPNHFIDLVEGC-----RVMPSSSSPSSLPPSSTAEL-----RPKYLARLTIPXXXXXXXXXXXXXXXXGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRHL--------TLLHADSTHAHLSISSLLSHEQ---ARAHSLSLQLSQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQEKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQRGQDAGQHRLSMSVQE-------NGRLTQELREMKVALEEAKRENESNQQVITWLNKEINDLQLG 558
            FDR  PLF+    V V   D D          ++LPLT+R+LTG     +A +Q+     ERV+R+EIT   DDD  D             YFLY   VSE ++  LK  Q LLVDF TFP + I+L++ C     ++                 +     +  YLA L                     F+IVE   FK+LTHLSL F P  D A+K YLA RL  +        T L   S     +  S    +Q   A  +     LSQ +                                                  XXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +V+ KT  L  +A+   + ++E+L++Y++N   LQ+KLE+S+ EI KGN II ++Q + + L+ K++ K +++++QE  + E Q  ++     L  +  +                     LE++ +   SNQQVITWLNKEIN+ QLG
Sbjct:    4 FDRDEPLFDRRFHVLVQYPDRD---------EKLLPLTIRLLTGQN---NAKNQK-----ERVIRVEIT---DDDGVD------------PYFLYLWSVSEEEFHELKAQQRLLVDFATFPANLIELLQCCLKDSKKIAQXXXXXXXXXXXEGTSMDAHNQKTSYLAVLN-----------TMDSSGQSVFSIVETNPFKQLTHLSLRFFPGDDAAIKAYLAARLAQVGASKRSLSTSLKQTSEELQATQKSEAKLQQQLSALGYEAESTLSQEKMKFADELEEQRRAAATALKEREDELNAKIDALVERYEKEVQILKAAAEASXXXXXXXSKQKYQHEMQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVIKKTADLLQSAKLHNEEVDESLKMYRDNHGRLQQKLELSISEINKGNEIIERIQNENRTLKSKMRMKVKIIKQQEQFVEEKQLQREEALLELKSTKDDIRXXXXXXXXXXXXXXXXSQKLEDSNKLLASNQQVITWLNKEINEAQLG 512          
The following BLAST results are available for this feature:
BLAST of NO02G05750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30093.11.500e-12954.65spindle assembly abnormal protein 6 [Nannochlorops... [more]
XP_008871605.13.400e-2833.88hypothetical protein H310_07871 [Aphanomyces invad... [more]
OQR84215.13.400e-2833.04spindle assembly protein [Achlya hypogyna][more]
XP_012205614.11.000e-2732.05hypothetical protein SPRG_11077 [Saprolegnia paras... [more]
XP_008616548.11.300e-2732.60hypothetical protein SDRG_12260 [Saprolegnia dicli... [more]
POM60363.11.900e-2337.20Spindle assembly protein [Phytophthora palmivora v... [more]
CCI50727.12.500e-2333.51unnamed protein product [Albugo candida][more]
CCA16955.11.600e-2229.20spindle assembly protein putative [Albugo laibachi... [more]
XP_002998173.15.800e-2034.55spindle assembly protein, putative [Phytophthora i... [more]
POM64791.11.000e-1934.78Spindle assembly protein [Phytophthora palmivora v... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL017nonsL017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR001ngnoR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007274NSK007274Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05750.1NO02G05750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668095gene_1166Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100193g3gene554Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05750.1NO02G05750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05750 ID=NO02G05750|Name=NO02G05750|organism=Nannochloropsis oceanica|type=gene|length=2288bp
ATGGCGCCACCTTCCGCTGCCTTTACCTCTTTCTCGTCTTCGATGCAGGG
CAACAGGGGGGATAGCTGCATCAGGGGGAGCAGCGGAATCAATGCTGCCT
TTGACCGTGCCAACCCATTGTTCGAAGCTACCCTACGTGTCGAGGTCTGC
CGTGCAGATAGTGATGCAGGGCAGTCACACCAGGAAGGTAGCAGTGAGgt
gagtgtgcgtgtgtgtttgtgcctgttgagtagtgaagctccatcccgta
gccggccctctaaactcccctccttcctccctcacatgtgtgcatctcct
aaggctgccagcagaatttctcccaatctataccgtacatcagcgcctca
gtgcacctccctcacattccctctggtcgctcttcctcctcctcatcgag
ctctcatcctccttcctccaccctacccatatccccaaaccgaccgacac
agGTCTTGCCCCTTACACTCCGAGTCCTGACCGGCACCGCCCTGCCTTTT
GATGCGCCCTCTCAGCGCTACTGCGGCAGGACCGAAAGGGTGCTACGCAT
CGAAATCACGCAAAAGGATGACGACGACAAGAATGACGAAGGGGCTGGTG
GACGGGGAGATAACAACGCCTCCGCCTACTTCCTCTACTCCCTGGACGTG
TCCGAGACCGACTACCCGGCCTTGAAGCGGGACCAGAGCCTGTTGGTAGA
CTTCACTACCTTTCCCAACCACTTTATTGACCTGGTGGAAGGCTGCAGGG
TCATGCCCTCCTCCTCTTCCCCTTCCTCCCTCCCTCCCTCCTCCACGGCC
GAGCTACGACCCAAATACCTGGCCCGCCTCACCATCCCCTCCTCCTCCTC
CTCCTCCTCCTCCACTACCACCACCTCACCTTCCTCGGGCACCTTCGCCA
TCGTAGAGGCCACCCGATTTAAAGAGCTCACCCACCTCTCCCTTTCCTTC
TGCCCCCCCACGGACCACGCCCTCAAAGTCTACCTCGCCACGCGCCTCCG
TCATCTTACCCTCCTCCACGCTGACTCCACGCACGCCCACCTCTCCATCT
CCTCTCTCCTCTCCCATGAACAAGCCCGAGCCCACTCCCTTTCCCTGCAG
CTCTCTCAGCTCCAGCACCAAAAAGACGAGGAAATCTCCTCCCTCCGCTC
CTCCCACACCCACGCCAGGGAAACTGCCCTGGCCGCGCACTCGCACGAAA
AACAATCGCTGCTCCATAAACACGAGCAACAGATGGCAAGCCTAAAAAAG
AGATTGGAGGAGACGGAGCGACGCAGGGCCGTGTTGGCGGAGGCCCGGCA
TGGGCAGGAAGCAAGCTTCCGTGAGATGGCGAGGCAAGTCGAAGATCTGA
CCAGTCGCCTGACAAGAAAGGAGGAGGAGGTGGTGCTTCGGCTGGGTGAG
AAGGAGGCGATGGATGGGACTTTGAAAAGAGTGGAGAGGGAGAGGGATGG
TGCATTGCTGAAGGTGGAGGGGCTTCTGCAGCAGTTAAATGGTCAGGGTG
AGGTACTGGGGAAGACAAAGGCCCTCCAGGCAGCCGCTGAGGGAGGCAGG
AAGAGGATGGAGGAGGCCTTGGAGCTGTACAAGAACAACGCGTTGACCCT
GCAGGAAAAGCTGGAGATGTCGGTGGGGGAGATCCAGAAGGGAAATGCCA
TCATTCATAAGCTGCAGGGAGACGTCCAGGCACTGCGAGGGAAACTTAAG
ACTAAAAATGAAGTGCTCAGGAAGCAGGAGGCACTGCTGGTGGAGGGCCA
GAGGGGGCAGGACGCGGGCCAGCATCGATTGAGCATGTCGGTGCAGGAGA
ATGGAAGGTTGACGCAGGAGTTGAGAGAGATGAAGGTAGCTTTGGAAGAG
GCGAAGAGGGAGAACGAATCGAACCAGCAGGTTATCACGTGGTTGAACAA
GGAGATCAATGACTTGCAATTGGGAAGGGGGAGTAGTGGGCTGATGTACG
CCATGACAGGGGGAGGAGGGACTGGAGGGAAAGGGCGGCAAGGCCTCAAC
CGTCCCAGCACATCTTCCTCCACAGCTGCCTCCGTCGCGACCTTCATACC
GTCCTACCAGCATACCACGCCAACGAAGGGCAAAGGCGGACAGTCGGTCC
ACGTTACCCCCTCGTCAGTGGCGGTACCCGTAAGTATGGTCAAGAAGCAG
CAGCATCAACAACAAGAAGAGCAATACAAGGAGCCGATGCAGCATGAGAA
AGTGAATATGTCAGCTTCGTCTTTAGAGTCAGCCTCTTCAACACACTACC
TGGACGCGCTGGGTTTGTCGGATCCCTACCAACAGTAA
back to top

protein sequence of NO02G05750.1

>NO02G05750.1-protein ID=NO02G05750.1-protein|Name=NO02G05750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=678bp
MAPPSAAFTSFSSSMQGNRGDSCIRGSSGINAAFDRANPLFEATLRVEVC
RADSDAGQSHQEGSSEVLPLTLRVLTGTALPFDAPSQRYCGRTERVLRIE
ITQKDDDDKNDEGAGGRGDNNASAYFLYSLDVSETDYPALKRDQSLLVDF
TTFPNHFIDLVEGCRVMPSSSSPSSLPPSSTAELRPKYLARLTIPSSSSS
SSSTTTTSPSSGTFAIVEATRFKELTHLSLSFCPPTDHALKVYLATRLRH
LTLLHADSTHAHLSISSLLSHEQARAHSLSLQLSQLQHQKDEEISSLRSS
HTHARETALAAHSHEKQSLLHKHEQQMASLKKRLEETERRRAVLAEARHG
QEASFREMARQVEDLTSRLTRKEEEVVLRLGEKEAMDGTLKRVERERDGA
LLKVEGLLQQLNGQGEVLGKTKALQAAAEGGRKRMEEALELYKNNALTLQ
EKLEMSVGEIQKGNAIIHKLQGDVQALRGKLKTKNEVLRKQEALLVEGQR
GQDAGQHRLSMSVQENGRLTQELREMKVALEEAKRENESNQQVITWLNKE
INDLQLGRGSSGLMYAMTGGGGTGGKGRQGLNRPSTSSSTAASVATFIPS
YQHTTPTKGKGGQSVHVTPSSVAVPVSMVKKQQHQQQEEQYKEPMQHEKV
NMSASSLESASSTHYLDALGLSDPYQQ*
back to top
Synonyms
Publications