NO02G05720, NO02G05720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05720 vs. NCBI_GenBank
Match: EWM30104.1 (dihydrolipoamide s-acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 155.2 bits (391), Expect = 2.700e-34 Identity = 84/123 (68.29%), Postives = 94/123 (76.42%), Query Frame = 0 Query: 1 MLALASRRTAALAAST-TGIRASLVRPTKATSTLSGSRGIGFATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVI 123 MLA ASRR A T G R +L R ++ S FA+LPEHTVVG+PALSPTMTHGN+A+WHKKEGD+IGPGD LCDIETDKATMAFEAQD+ +AKILV EG SDIAVGSPIMVI Sbjct: 1 MLAFASRRLVVAGAVTRAGTRGALPRASRPKYLASTMERATFASLPEHTVVGMPALSPTMTHGNVAVWHKKEGDEIGPGDALCDIETDKATMAFEAQDEGAVAKILVEEGTSDIAVGSPIMVI 123
BLAST of NO02G05720 vs. NCBI_GenBank
Match: XP_018219804.1 (LAT1-like protein [Saccharomyces eubayanus] >KOG97086.1 LAT1-like protein [Saccharomyces eubayanus]) HSP 1 Score: 133.3 bits (334), Expect = 1.100e-27 Identity = 63/99 (63.64%), Postives = 75/99 (75.76%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSN 140 +A+ P HT++G+PALSPTMT GNLA+W KKEGD + PG+V+ +IETDKA M FE Q+D LAKILV EG DI V PI V VE KDDVAAF DF L + Sbjct: 28 YASYPAHTIIGMPALSPTMTQGNLAVWSKKEGDQLAPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKDDVAAFKDFKLED 126
BLAST of NO02G05720 vs. NCBI_GenBank
Match: XP_009827045.1 (pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces astaci] >ETV83615.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Aphanomyces astaci]) HSP 1 Score: 132.1 bits (331), Expect = 2.400e-27 Identity = 69/123 (56.10%), Postives = 83/123 (67.48%), Query Frame = 0 Query: 20 RASLVRPTKATSTLSGSRGIGFATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSNITP 143 R LVRP+ S F+TLPEH VVGLPALSPTM G ++ W KKEGD I GD++C IETDKA + FEAQDD+ LAKIL EG++D+ VG PI V VE ++ AFA FSLS + P Sbjct: 13 RQLLVRPS--------STARAFSTLPEHEVVGLPALSPTMETGTISTWLKKEGDKIAAGDIVCQIETDKAVVDFEAQDDSYLAKILKPEGSADVKVGEPIFVTVEDPSEIPAFASFSLSGVAP 127
BLAST of NO02G05720 vs. NCBI_GenBank
Match: EJT43569.1 (LAT1-like protein [Saccharomyces kudriavzevii IFO 1802]) HSP 1 Score: 131.7 bits (330), Expect = 3.200e-27 Identity = 62/99 (62.63%), Postives = 75/99 (75.76%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSN 140 +A+ PEHT++G+PALSPTMT GNLA+W KKEGD + PG+V+ +IETDKA M FE Q+D LAKILV EG DI V PI V VE K+DV AF DF L + Sbjct: 28 YASYPEHTIIGMPALSPTMTQGNLAVWSKKEGDQLAPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKNDVPAFKDFKLED 126
BLAST of NO02G05720 vs. NCBI_GenBank
Match: EWM27998.1 (dihydrolipoamide s-acetyltransferase (e2 component of pyruvate dehydrogenase complex) [Nannochloropsis gaditana]) HSP 1 Score: 131.3 bits (329), Expect = 4.200e-27 Identity = 62/96 (64.58%), Postives = 76/96 (79.17%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFS 137 F++LP H VVGLPALSPTM HG +A W KKEGD GPGDV+C+IETDKA ++F+AQD+ +LAKILV A ++ VG PIMV VE +VAAFA+FS Sbjct: 88 FSSLPPHQVVGLPALSPTMEHGTIASWTKKEGDSFGPGDVICEIETDKAVVSFDAQDEGILAKILVQPSAGEVRVGQPIMVTVEDAANVAAFANFS 183
BLAST of NO02G05720 vs. NCBI_GenBank
Match: EJS41948.1 (lat1p [Saccharomyces arboricola H-6]) HSP 1 Score: 130.2 bits (326), Expect = 9.300e-27 Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSN 140 +A+ P+HT++G+PALSPTMT GNLA+W KKEGD + PG+V+ +IETDKA M FE Q+D LAKILV EG DI V PI V VE K+DV AF DF L + Sbjct: 28 YASYPQHTIIGMPALSPTMTQGNLAVWTKKEGDQLAPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKNDVPAFKDFKLED 126
BLAST of NO02G05720 vs. NCBI_GenBank
Match: XP_002494423.1 (uncharacterized protein ZYRO0A01144g [Zygosaccharomyces rouxii] >CAR25490.1 ZYRO0A01144p [Zygosaccharomyces rouxii] >GAV46462.1 hypothetical protein ZYGR_0A00540 [Zygosaccharomyces rouxii]) HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26 Identity = 64/102 (62.75%), Postives = 73/102 (71.57%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSNITP 143 +A+ P HTV+G+PALSPTM GNLA W KKEG+ IG GDVL +IETDKATM FE QD+A LAKILV EG DI +G PI V VE DV AF DF + P Sbjct: 26 YASYPAHTVIGMPALSPTMAQGNLAQWSKKEGEQIGAGDVLAEIETDKATMDFEFQDEAYLAKILVPEGTKDIPIGKPIAVTVEDGGDVDAFKDFKVEESAP 127
BLAST of NO02G05720 vs. NCBI_GenBank
Match: AJT24869.1 (Lat1p [Saccharomyces cerevisiae YJM1388]) HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26 Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSN 140 +A+ PEHTV+G+PALSPTMT GNLA W KKEGD + PG+V+ +IETDKA M FE Q+D LAKILV EG DI V PI V VE K DV AF DF L + Sbjct: 28 YASYPEHTVIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADVPAFKDFKLED 126
BLAST of NO02G05720 vs. NCBI_GenBank
Match: AJT30741.1 (Lat1p [Saccharomyces cerevisiae YJM1460]) HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26 Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSN 140 +A+ PEHTV+G+PALSPTMT GNLA W KKEGD + PG+V+ +IETDKA M FE Q+D LAKILV EG DI V PI V VE K DV AF DF L + Sbjct: 28 YASYPEHTVIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADVPAFKDFKLED 126
BLAST of NO02G05720 vs. NCBI_GenBank
Match: EGA81184.1 (Lat1p [Saccharomyces cerevisiae Lalvin QA23]) HSP 1 Score: 129.4 bits (324), Expect = 1.600e-26 Identity = 62/99 (62.63%), Postives = 73/99 (73.74%), Query Frame = 0 Query: 41 FATLPEHTVVGLPALSPTMTHGNLALWHKKEGDDIGPGDVLCDIETDKATMAFEAQDDAVLAKILVTEGASDIAVGSPIMVIVESKDDVAAFADFSLSN 140 +A+ PEHT++G+PALSPTMT GNLA W KKEGD + PG+V+ +IETDKA M FE Q+D LAKILV EG DI V PI V VE K DV AF DF L + Sbjct: 28 YASYPEHTIIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADVPAFKDFKLED 126 The following BLAST results are available for this feature:
BLAST of NO02G05720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05720 ID=NO02G05720|Name=NO02G05720|organism=Nannochloropsis oceanica|type=gene|length=2171bpback to top protein sequence of NO02G05720.1 >NO02G05720.1-protein ID=NO02G05720.1-protein|Name=NO02G05720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=257bpback to top Synonyms
Publications
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