NO02G05630, NO02G05630 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05630 vs. NCBI_GenBank
Match: EWM30163.1 (zinc finger matrin-type protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 287.7 bits (735), Expect = 3.200e-74 Identity = 147/192 (76.56%), Postives = 164/192 (85.42%), Query Frame = 0 Query: 1 MADEEHSKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRREEERRNAGPRESAIKIYERKLEEEGAVKEQWK 193 MAD+E KK K P+GALNVERRTWD+EHF+++AKERL KREEFQ+AE GAAGPEGSKRAYLKHREADLGLE+KVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALG+SMRVERVGVDRVKERL ALKRRE+E++ AGPRESAI Y++KLE++ A+K QWK Sbjct: 1 MADDE-QKKKKIPTGALNVERRTWDLEHFEKIAKERLXXXXXXXXXXXXXXXXXKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGPRESAIDAYQKKLEKDEAIKAQWK 191
BLAST of NO02G05630 vs. NCBI_GenBank
Match: CBN77479.1 (Conserved C2H2 zinc finger protein [Ectocarpus siliculosus]) HSP 1 Score: 155.6 bits (392), Expect = 1.900e-34 Identity = 87/150 (58.00%), Postives = 110/150 (73.33%), Query Frame = 0 Query: 18 NVE-RRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRK--REEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRREEER 165 NVE RRTWD ++++ AKER+E + EK + G R+ +EEFQ A GAAGP GS RAYLK RE + L K+GK QVVT +S P QQGG++C+IC+C LKDS+ YLDHINGKKHQ+ LG+SMRVER V +VK+RL K+REE+R Sbjct: 12 NVESRRTWDRDYYEAKAKERIE-QGDDYQEKDEGGPARRSQKEEFQPAALGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDR 160
BLAST of NO02G05630 vs. NCBI_GenBank
Match: ETK74069.1 (hypothetical protein L915_19076 [Phytophthora parasitica]) HSP 1 Score: 141.4 bits (355), Expect = 3.700e-30 Identity = 79/161 (49.07%), Postives = 108/161 (67.08%), Query Frame = 0 Query: 1 MADEEHSKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRRE 162 MAD+ S+K +G NV R+TWD H++++A +L E E E+ K +EEFQ+A +GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LG+SMRVER VD+VK RL + +R+ Sbjct: 1 MADKSGSRKG---AGVANVTRQTWDRAHYEKLA--QLRAEGKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRK 155
BLAST of NO02G05630 vs. NCBI_GenBank
Match: ETL27478.1 (hypothetical protein L916_18977 [Phytophthora parasitica] >ETM33937.1 hypothetical protein L914_18887 [Phytophthora parasitica] >ETO62485.1 hypothetical protein F444_19614 [Phytophthora parasitica P1976] >ETP03570.1 hypothetical protein F441_19483 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 141.4 bits (355), Expect = 3.700e-30 Identity = 79/161 (49.07%), Postives = 108/161 (67.08%), Query Frame = 0 Query: 1 MADEEHSKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRRE 162 MAD+ S+K +G NV R+TWD H++++A +L E E E+ K +EEFQ+A +GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LG+SMRVER VD+VK RL + +R+ Sbjct: 1 MADKSGSRKG---AGVANVTRQTWDRAHYEKLA--QLRAEGKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRK 155
BLAST of NO02G05630 vs. NCBI_GenBank
Match: ETL80745.1 (hypothetical protein L917_18797 [Phytophthora parasitica] >KUF87651.1 Zinc finger matrin-type protein 2 [Phytophthora nicotianae] >KUG01779.1 Zinc finger matrin-type protein 2 [Phytophthora nicotianae]) HSP 1 Score: 141.0 bits (354), Expect = 4.800e-30 Identity = 79/161 (49.07%), Postives = 108/161 (67.08%), Query Frame = 0 Query: 1 MADEEHSKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRRE 162 MAD+ S+K +G NV R+TWD H++++A +L E E E+ K +EEFQ+A +GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LG+SMRVER VD+VK RL + +R+ Sbjct: 1 MADKSGSRKG---AGVANVTRQTWDRAHYEKLA--QLRAEGKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDLSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRK 155
BLAST of NO02G05630 vs. NCBI_GenBank
Match: XP_008913644.1 (hypothetical protein PPTG_17522 [Phytophthora parasitica INRA-310] >ETN01089.1 hypothetical protein PPTG_17522 [Phytophthora parasitica INRA-310]) HSP 1 Score: 140.6 bits (353), Expect = 6.300e-30 Identity = 79/161 (49.07%), Postives = 107/161 (66.46%), Query Frame = 0 Query: 1 MADEEHSKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRRE 162 MAD+ S+K G NV R+TWD H++++A +L E E E+ K +EEFQ+A +GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LG+SMRVER VD+VK RL + +R+ Sbjct: 1 MADKSGSRKG---PGVANVTRQTWDRAHYEKLA--QLRAEGKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRK 155
BLAST of NO02G05630 vs. NCBI_GenBank
Match: ETP31744.1 (hypothetical protein F442_19433 [Phytophthora parasitica P10297]) HSP 1 Score: 140.2 bits (352), Expect = 8.200e-30 Identity = 78/161 (48.45%), Postives = 108/161 (67.08%), Query Frame = 0 Query: 1 MADEEHSKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRRE 162 MAD+ ++K +G NV R+TWD H++++A +L E E E+ K +EEFQ+A +GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LG+SMRVER VD+VK RL + +R+ Sbjct: 1 MADKSGTRKG---AGVANVTRQTWDRAHYEKLA--QLRAEGKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDVSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRK 155
BLAST of NO02G05630 vs. NCBI_GenBank
Match: XP_024581717.1 (zinc finger matrin-type protein 2 [Plasmopara halstedii] >CEG45348.1 zinc finger matrin-type protein 2 [Plasmopara halstedii]) HSP 1 Score: 139.0 bits (349), Expect = 1.800e-29 Identity = 75/155 (48.39%), Postives = 105/155 (67.74%), Query Frame = 0 Query: 7 SKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRRE 162 + S+K +G NV R+TWD H++++A +L E E E K +EEFQ+A++ AAGP GS RA+LK R A + LE VG ++VV S + GY+C++C+C LKDS+AYLDHINGKKH + LG+SMRVER VD+VK+RL + +R+ Sbjct: 57 ASNSRKGAGVSNVVRQTWDRAHYEKLA--QLRAEGGVEKETTKKVIHSSKEEFQTADESAAGPAGSARAFLKARTAKMSLETSVGTVKVVK-SDELSKNSGYYCEVCECSLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKDRLQSAAKRK 208
BLAST of NO02G05630 vs. NCBI_GenBank
Match: ETI33693.1 (hypothetical protein F443_19654 [Phytophthora parasitica P1569]) HSP 1 Score: 138.7 bits (348), Expect = 2.400e-29 Identity = 78/161 (48.45%), Postives = 108/161 (67.08%), Query Frame = 0 Query: 1 MADEEHSKKSKKPSGALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRRE 162 MAD+ ++K +G NV R+TWD H++++A +L E E E+ K +EEFQ+A +GAAGP GS RA+LK R + LE VG ++VV S + GGY+C++C+C LKDS+AYLDHINGKKH + LG+SMRVER VD+VK RL + +R+ Sbjct: 1 MADKSGTRKG---AGVANVTRQTWDRAHYEKLA--QLRAEGKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVK-SDDLSKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKIRLQSASKRK 155
BLAST of NO02G05630 vs. NCBI_GenBank
Match: OQR82703.1 (hypothetical protein ACHHYP_15603 [Achlya hypogyna]) HSP 1 Score: 136.7 bits (343), Expect = 9.000e-29 Identity = 79/172 (45.93%), Postives = 109/172 (63.37%), Query Frame = 0 Query: 15 GALNVERRTWDIEHFQEVAKERLEKEASGESEKKKPGFVRKREEFQSAEQGAAGPEGSKRAYLKHREADLGLEDKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGFSMRVERVGVDRVKERLGALKRREEERRNAGPRESAIKIYERKLEEEGA 187 G NV RRTWD F + K L E+E K V +REEFQ+A +GAAGP GS RA+LK R + LE+ VGK V+ + + GY+C++C+ LKDS++Y+DHINGK+H + LGFSMRVE+VGV+ VKERL +R+ + + + A++ YE+KL E A Sbjct: 6 GVANVTRRTWDKAFFAQ--KAALRANGLLETESKSTKAVSQREEFQAAPEGAAGPIGSARAFLKARTKQVELEENVGKTVVLKPTDDTAKATGYFCEVCEVTLKDSVSYIDHINGKRHLRRLGFSMRVEKVGVEAVKERLNMASKRKWD-PSVAKKPDAVEAYEKKLAEMDA 174 The following BLAST results are available for this feature:
BLAST of NO02G05630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05630 ID=NO02G05630|Name=NO02G05630|organism=Nannochloropsis oceanica|type=gene|length=3165bpback to top protein sequence of NO02G05630.1 >NO02G05630.1-protein ID=NO02G05630.1-protein|Name=NO02G05630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top protein sequence of NO02G05630.2 >NO02G05630.2-protein ID=NO02G05630.2-protein|Name=NO02G05630.2|organism=Nannochloropsis oceanica|type=polypeptide|length=234bpback to top Synonyms
Publications
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