NO02G05610, NO02G05610 (gene) Nannochloropsis oceanica

Overview
NameNO02G05610
Unique NameNO02G05610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1747
Alignment locationchr2:1490476..1492222 -

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphomannomutase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1490476..1492222 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009298GDP-mannose biosynthetic process
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004615phosphomannomutase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR005002PMM
Homology
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: EWM30159.1 (phosphomannomutase [Nannochloropsis gaditana])

HSP 1 Score: 456.4 bits (1173), Expect = 6.400e-125
Identity = 228/294 (77.55%), Postives = 252/294 (85.71%), Query Frame = 0 
Query:    1 MLTRPF-RAAFILPILSSCAPTRSSAITSIRSILTTGTT----FKRMPPANPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELFFR 290
            ML RPF    F+LPILSSC PT  SAI   RS+ TT +T       M PANPRIIALFDVDGTLTPARK I P T A +KKLREKITIGVVGGSDF KQ EQLG TVL DFDYSFSENGLVAYH+G QIGHTS+N HLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNC++EER+AFEVMDL+ G+RKT++EKMR+KFA+LDLT+SIGGQISFD+FPKGWDKTYCL+YL E  FDE+HFFGDKTFEGGND EI+ HPRV+GH+V  PE+TVKQL ELF +
Sbjct:   21 MLARPFCTIPFVLPILSSCTPT--SAIVLGRSVATTTSTPSILRDGMAPANPRIIALFDVDGTLTPARKVIEPATIACLKKLREKITIGVVGGSDFRKQMEQLGPTVLTDFDYSFSENGLVAYHEGIQIGHTSMNAHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCSQEERDAFEVMDLQKGIRKTLLEKMREKFAHLDLTYSIGGQISFDVFPKGWDKTYCLKYLPENSFDEIHFFGDKTFEGGNDFEIYTHPRVMGHSVKNPEETVKQLEELFLK 312
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: CBJ32201.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 379.4 bits (973), Expect = 9.900e-102
Identity = 173/250 (69.20%), Postives = 214/250 (85.60%), Query Frame = 0 
Query:   42 MPPANPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEG--DFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELFFR 290
            MP  NPRIIALFDVDGTLT ARK++ P+   FI  LR++ITIGVVGGSD PKQKEQLGETV++D+DYSFS+NGLVAY  G+ IG  +I+ H+GEEN+K I+NW L+Y+S +DIP+KRGTFIE+RTGMLNISP+GRNC++EER+AFE  D E+ +R+TMV+ MR +FA+L+LTFSIGGQISFDLFP GWDKT+CL++L EG  ++DE+HFFGDKTF+GGND EIF  PR IGHTVT PEDT+KQ +ELF +
Sbjct:    1 MPAKNPRIIALFDVDGTLTAARKEVLPDMVEFIANLRKEITIGVVGGSDLPKQKEQLGETVMQDYDYSFSQNGLVAYKAGELIGEQTISKHVGEENLKKIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQEERDAFEQYDNEHKIRQTMVDAMRTEFADLNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTTEYDEIHFFGDKTFKGGNDFEIFESPRTIGHTVTSPEDTMKQCKELFLK 250
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: AIW04131.1 (phosphomannomutase [Saccharina japonica] >AUN86412.1 phosphomannomutase [Saccharina japonica])

HSP 1 Score: 373.2 bits (957), Expect = 7.100e-100
Identity = 170/246 (69.11%), Postives = 212/246 (86.18%), Query Frame = 0 
Query:   46 NPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEG--DFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELFFR 290
            NPRIIALFDVDGTLT ARK++ P+   FIK LRE+ITIGVVGGSD PKQKEQLGE+V+ED+DYSFS+NGLVAY  G+ IG  +I+ H+GEEN+K I+NW L+Y+S +DIP+KRGTFIE+RTGMLNISP+GRNC++EER+AFE  D  + +R+TMV  MR++FA+L+LTFSIGGQISFDLFP GWDKT+CL++L EG  ++DE+HFFGDKTF+GGND+EIF   R IGHTVT P DT++Q +ELFF+
Sbjct:    6 NPRIIALFDVDGTLTAARKEVLPDMVEFIKTLRERITIGVVGGSDLPKQKEQLGESVMEDYDYSFSQNGLVAYKAGELIGQQTISKHVGEENLKKIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQEERDAFEQYDNVHKIRETMVAAMREEFADLNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTAEYDEIHFFGDKTFKGGNDNEIFESERTIGHTVTSPADTIQQCKELFFK 251
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: XP_002289356.1 (phosphomannomutase [Thalassiosira pseudonana CCMP1335] >EED92893.1 phosphomannomutase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 359.4 bits (921), Expect = 1.100e-95
Identity = 167/244 (68.44%), Postives = 202/244 (82.79%), Query Frame = 0 
Query:   44 PANPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELF 288
            PANPRIIALFDVDGTLT  R ++T E  AF+ +L EKIT+G+VGGSD PKQ+EQLGE + + F Y+FS+NGLVAY  G+     +I   LGE+NIK IVNWTL+YL+D+DIP+KRGTFIE+R+GM+NISPIGRNC+REERN +E +DLE  +RK MVE MRK+FA+L+LT+SIGGQISFD+FP GWDKTYCL+YL   DFDE+HFFGDKTFEGGND+EIF   R IGHTVT PEDT +Q  +LF
Sbjct:    4 PANPRIIALFDVDGTLTIPRGEVTEEMMAFMHRLSEKITVGIVGGSDLPKQEEQLGEGIAKVFPYNFSQNGLVAYKNGELQEVQTIAKFLGEDNIKKIVNWTLKYLADVDIPVKRGTFIEFRSGMMNISPIGRNCSREERNDYEKIDLERNIRKNMVEAMRKEFADLNLTYSIGGQISFDVFPTGWDKTYCLKYLDAADFDEIHFFGDKTFEGGNDYEIFESERTIGHTVTSPEDTREQCEKLF 247
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: OEU22370.1 (putative phosphomannomutase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 359.0 bits (920), Expect = 1.400e-95
Identity = 162/245 (66.12%), Postives = 202/245 (82.45%), Query Frame = 0 
Query:   44 PANPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELFF 289
            P NPRIIALFDVDGTLT  R ++  +    +KKLR KIT+G+VGGSD PKQ+EQLG+ ++ +  ++FS+NGLVAY+ G  +   SI+  LGE+NIK IVNW ++YL+DLD+PIKRGTFIE+R+GMLNISPIGRNC+REERN +E  DL+N +RK MVE MRK+F+++D+T+SIGGQISFD FP GWDKTYCL+YL E DFDE+HFFGDKTFEGGND+EIF   R IGHTVT PEDT+ +L +LFF
Sbjct:    6 PENPRIIALFDVDGTLTIPRGEVKADMMDLLKKLRTKITVGIVGGSDLPKQEEQLGQGIVNEVVWNFSQNGLVAYNNGDLLESNSISKFLGEDNIKRIVNWVMKYLADLDLPIKRGTFIEFRSGMLNISPIGRNCSREERNDYEKFDLKNNIRKNMVEAMRKEFSDIDMTYSIGGQISFDCFPTGWDKTYCLQYLKESDFDEIHFFGDKTFEGGNDYEIFTSERTIGHTVTSPEDTIGKLEKLFF 250
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: GAX28761.1 (phosphomannomutase [Fistulifera solaris])

HSP 1 Score: 354.8 bits (909), Expect = 2.600e-94
Identity = 161/242 (66.53%), Postives = 201/242 (83.06%), Query Frame = 0 
Query:   46 NPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELF 288
            NPRI+ALFDVDGTLT  R +ITPE  AF+K L +KIT+G+VGGSD PKQ+EQLG  ++ DF ++FS+NGLVAY  G+     +++  LGE+N+K IVNW ++YL+DLDIP+KRGTFIE+R+GM NISPIGRNC+REER+ +EV DL++ VRK MVE M+K+FA+L LT+SIGGQISFD+FP GWDKTYCLR+L E D+DE+HFFGDKTFEGGND EIF H R IGHTVT P+DT +Q  +LF
Sbjct:    7 NPRILALFDVDGTLTIPRGEITPEMMAFMKDLSKKITVGIVGGSDLPKQQEQLGNGIVNDFPWNFSQNGLVAYKNGELQEVQTLSKFLGEDNVKRIVNWVMKYLADLDIPVKRGTFIEFRSGMFNISPIGRNCSREERDEYEVFDLKHNVRKNMVEAMKKEFADLGLTYSIGGQISFDVFPNGWDKTYCLRFLKEEDYDEIHFFGDKTFEGGNDFEIFTHNRTIGHTVTSPDDTREQCTKLF 248
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: GAX18198.1 (phosphomannomutase [Fistulifera solaris])

HSP 1 Score: 354.8 bits (909), Expect = 2.600e-94
Identity = 161/242 (66.53%), Postives = 201/242 (83.06%), Query Frame = 0 
Query:   46 NPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELF 288
            NPRI+ALFDVDGTLT  R +ITPE  AF+K L +KIT+G+VGGSD PKQ+EQLG  ++ DF ++FS+NGLVAY  G+     +++  LGE+N+K IVNW ++YL+DLDIP+KRGTFIE+R+GM NISPIGRNC+REER+ +EV DL++ VRK MVE M+K+FA+L LT+SIGGQISFD+FP GWDKTYCLR+L E D+DE+HFFGDKTFEGGND EIF H R IGHTVT P+DT +Q  +LF
Sbjct:    7 NPRILALFDVDGTLTIPRGEITPEMMAFMKDLSKKITVGIVGGSDLPKQQEQLGNGIVNDFPWNFSQNGLVAYKNGELQEVQTLSKFLGEDNVKRIVNWVMKYLADLDIPVKRGTFIEFRSGMFNISPIGRNCSREERDEYEVFDLKHNVRKNMVEAMKKEFADLGLTYSIGGQISFDVFPNGWDKTYCLRFLKEEDYDEIHFFGDKTFEGGNDFEIFTHNRTIGHTVTSPDDTREQCTKLF 248
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: XP_002181871.1 (phosphomannose mutase [Phaeodactylum tricornutum CCAP 1055/1] >EEC46411.1 phosphomannose mutase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 350.5 bits (898), Expect = 4.900e-93
Identity = 160/244 (65.57%), Postives = 197/244 (80.74%), Query Frame = 0 
Query:   44 PANPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELF 288
            P  PRI+ALFDVDGTLT  R +ITP+  AF+K L +K+T+G+VGGSD PKQ+EQLG  +++ F ++FS+NGLVAY+KG+ +   +I   LGE+N+K IVNW L+YL D+DIP+KRGTF E+R+GM NISPIGRNC+REERN +E  DLEN VRK MVE M K+FA+L LT+SIGGQISFD FPKGWDKTYCL++L   +FDE+HFFGDKTFEGGND EIF H R IGHTVT P+DT  Q  +LF
Sbjct:    5 PVKPRILALFDVDGTLTIPRGEITPDMMAFMKDLSKKVTVGIVGGSDLPKQEEQLGTGIVDVFPWNFSQNGLVAYNKGQLLEVQTIAKFLGEDNVKRIVNWVLKYLVDIDIPVKRGTFFEFRSGMFNISPIGRNCSREERNEYERFDLENNVRKKMVEAMAKEFADLGLTYSIGGQISFDCFPKGWDKTYCLKFLDASEFDEIHFFGDKTFEGGNDFEIFSHERTIGHTVTSPDDTKNQCTKLF 248
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: OQS06763.1 (hypothetical protein THRCLA_01207 [Thraustotheca clavata])

HSP 1 Score: 347.4 bits (890), Expect = 4.200e-92
Identity = 162/246 (65.85%), Postives = 196/246 (79.67%), Query Frame = 0 
Query:   42 MPPANPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELF 288
            M  ANPRI+ALFDVDGTLT ARK +TP+  A I KL+ +ITIGVVGGSD  KQKEQLGE V + FDYSFSENGLVAYHKGK I  TSI D LG E +  I+N+TL Y+++LDIP+KRGTFIE+R GMLN+SPIGRNC++EER+ FE  D  + +R  MV  +R +FA  +LT+SIGGQISFD+FP GWDKTYCLR+++  D+DE+HFFGDKT  GGND+EIFVH R IGH V  P+DT++ L ELF
Sbjct:    1 MAKANPRILALFDVDGTLTAARKTVTPQMIARIAKLKSQITIGVVGGSDLVKQKEQLGENVTDAFDYSFSENGLVAYHKGKLINKTSIKDFLGNEKLNKIINFTLLYIANLDIPVKRGTFIEFRQGMLNVSPIGRNCSQEERDEFEKYDHIHQIRSKMVNVLRTQFAEYNLTYSIGGQISFDVFPAGWDKTYCLRFISPSDYDEIHFFGDKTHVGGNDYEIFVHDRTIGHAVKTPDDTMRLLNELF 246
[Close]
BLAST of NO02G05610 vs. NCBI_GenBank
Match: XP_009535987.1 (hypothetical protein PHYSODRAFT_526336 [Phytophthora sojae] >EGZ07815.1 hypothetical protein PHYSODRAFT_526336 [Phytophthora sojae])

HSP 1 Score: 347.1 bits (889), Expect = 5.500e-92
Identity = 162/246 (65.85%), Postives = 196/246 (79.67%), Query Frame = 0 
Query:   42 MPPANPRIIALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGETVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLSDLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMVEKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFGDKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELF 288
            M P NPRIIALFDVDGTLT ARK  TPE  A +KKLRE ITIGVVGGSD  KQKEQLGE V E+FDYSFSENGLVAYHKGK IG T++      E I  +VN+ LRY++DLDIP+KRGTF+E+R GM+N+SPIGRNC++EER+ FE  D  + +R+T VEK+R +F   +LTFSIGGQISFD+FP GWDKT+CLRYL   D+DE+HFFGDKT +GGND+EI+   R IGH+V  PE+T++ L +LF
Sbjct:    1 MAPKNPRIIALFDVDGTLTAARKTATPEIHARLKKLRESITIGVVGGSDLVKQKEQLGEDVTENFDYSFSENGLVAYHKGKLIGETNLKSQYSNEQINRLVNFALRYIADLDIPVKRGTFVEFRMGMINVSPIGRNCSQEERDEFEKYDHIHKIRETFVEKLRAEFPEYNLTFSIGGQISFDVFPTGWDKTFCLRYLDPKDYDEIHFFGDKTHKGGNDYEIYTSDRTIGHSVKNPEETIQILDQLF 246
The following BLAST results are available for this feature:
BLAST of NO02G05610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30159.16.400e-12577.55phosphomannomutase [Nannochloropsis gaditana][more]
CBJ32201.19.900e-10269.20conserved unknown protein [Ectocarpus siliculosus][more]
AIW04131.17.100e-10069.11phosphomannomutase [Saccharina japonica] >AUN86412... [more]
XP_002289356.11.100e-9568.44phosphomannomutase [Thalassiosira pseudonana CCMP1... [more]
OEU22370.11.400e-9566.12putative phosphomannomutase [Fragilariopsis cylind... [more]
GAX28761.12.600e-9466.53phosphomannomutase [Fistulifera solaris][more]
GAX18198.12.600e-9466.53phosphomannomutase [Fistulifera solaris][more]
XP_002181871.14.900e-9365.57phosphomannose mutase [Phaeodactylum tricornutum C... [more]
OQS06763.14.200e-9265.85hypothetical protein THRCLA_01207 [Thraustotheca c... [more]
XP_009535987.15.500e-9265.85hypothetical protein PHYSODRAFT_526336 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL018nonsL018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR003ngnoR003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007193NSK007193Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05610.1NO02G05610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550560gene_1148Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100096g21gene493Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05610.1NO02G05610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05610 ID=NO02G05610|Name=NO02G05610|organism=Nannochloropsis oceanica|type=gene|length=1747bp
ATGCTCACGCGTCCCTTCCGTGCTGCTTTTATATTGCCCATCTTGTCGTC
GTGCGCGCCTACCCGTAGCTCCGCAATAACCTCCATACGgtaagacaaca
ccaatgattggccgttccccccttccagcgcctacccttcttcgtagtcc
ctacgtgcgctctatcatccaatcgcgcaatggccatcctcggtcaaaag
ctccgtcctttgtatgcacttagccagcaagcatccctctacatcgatcg
aaaccaaacgtaacactcccttcctcatccctcaccctccctcctccctc
ctacccctcccctctgtctagCTCCATCCTCACAACCGGCACGACTTTTA
AAAGAATGCCTCCCGCCAACCCCAGAATCATCGCTCTTTTCGACGTGGAT
GGCACGCTCACCCCCGCCCGCAAAGACATAACCCCCGAAACCGCCGCATT
CATCAAGAAACTCCGGGAGAAAATCACCATTGGGGTGGTGGGCGGCTCAG
ATTTCCCCAAGCAAAAAGAACAACTCGGCGAGACCGTCCTTGAAGACTTC
GATTACTCCTTCTCCGAGAATGGGTTGGTCGCCTACCACAAGGGTAAGCA
GATCGGCCATACCTCCATCAATGACCACTTGGGGGAAGAAAACATCAAGG
CGATTGTGAACTGGACGCTGCGATACCTCTCGGgtaagtgaaggaggggg
ggagggagggagggagggagggaggggaagaggacaggaaagtatggaat
tcaaattgtgagtatgatctgccttatggtagacgattcatgtataaatt
gcataccaactgtctcctgcagcctggaagattcaagattcacgagcact
cgattcccctccctctttccctccttcttccctccattcattcctttcct
tcccctcacttcctccccgccctcctttccctcccaacaccaagATCTGG
ACATTCCCATCAAGCGCGGAACATTCATTGAGTACCGGACAGGGATGCTC
AATATCTCCCCCATTGGCCGTAACTGCAACAGAGAGGAGCGCAATGCCTT
CGAGgtgaagaggagggaggaaggggtggggcacgctggtacaccgcttc
tattcgactgactcttttcctcccttcctctctccttccctccctcgctc
ccttcctttctccttccttccccctcttcttctcctctccagGTGATGGA
CCTAGAGAATGGTGTCCGCAAGACAATGGTGGAGAAGATGCGCAAGAAGT
TTGCTAATTTAGACCTGACCTTTTCGATCGGGGGCCAGATCTCTTTTGAT
TTGTTTCCCAAGGGCTGGGATAAAACGTATTGCCTCAGgttcggaggagc
ggggctggggagggaaggagggaaggagggattgttggctggctgaggta
gacttggggtcttcgattggcgggcctatttcattagataaggttaggtt
aggttagattcagattaaataagatcagattagattaaattcgattggat
tcgattcgattcgatttgaccagagtatttgcataatattacgacatcct
tcatcgacctcttcctctttcctcccttgttaagGTATCTCGCGGAAGGC
GATTTTGACGAGGTACATTTCTTTGGGGACAAGACGTTCGAGGGCGGGAA
CGACCACGAGATTTTTGTGCACCCGCGCGTGATTGGCCACACGGTGACAT
GCCCGGAGGACACGGTGAAGCAATTGAGGGAGTTGTTTTTTAGGTAA
back to top

protein sequence of NO02G05610.1

>NO02G05610.1-protein ID=NO02G05610.1-protein|Name=NO02G05610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=290bp
MLTRPFRAAFILPILSSCAPTRSSAITSIRSILTTGTTFKRMPPANPRII
ALFDVDGTLTPARKDITPETAAFIKKLREKITIGVVGGSDFPKQKEQLGE
TVLEDFDYSFSENGLVAYHKGKQIGHTSINDHLGEENIKAIVNWTLRYLS
DLDIPIKRGTFIEYRTGMLNISPIGRNCNREERNAFEVMDLENGVRKTMV
EKMRKKFANLDLTFSIGGQISFDLFPKGWDKTYCLRYLAEGDFDEVHFFG
DKTFEGGNDHEIFVHPRVIGHTVTCPEDTVKQLRELFFR*
back to top
Synonyms
Publications