NO02G05570, NO02G05570 (gene) Nannochloropsis oceanica

Overview
NameNO02G05570
Unique NameNO02G05570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1581
Alignment locationchr2:1481033..1482613 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1481033..1482613 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G05570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL018nonsL018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR003ngnoR003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05570.1NO02G05570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05570.1NO02G05570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05570 ID=NO02G05570|Name=NO02G05570|organism=Nannochloropsis oceanica|type=gene|length=1581bp
GACTCAAACTGTGGCATGCGGGATGGCGAGGCAAGTTCCACCTCGCGTTG
CGTTGCTGCTTGCGTCGTGCTGCCTTTTTGGAACTCATGCATGTCTTCGG
GCATGGCCAAGTACCGCACTCATGGAATAAGGCAGACCGGTGAGTTTGGC
ACTGGAACAGCTACACACACTGCCCGTTGTGTCATTTTGCCCCTCGCGCG
GAGATGGACATGAAGGCTGCTTGATTTTGGCGTTCATCTAGAGCAGTCGC
CGTGGCTTCAAGCCTTTCCTTGTCCCGTCCGACCCCTCTGGTTGACCCGC
CGCACAGAGCCTTTCACCCTCTGAGTGTTGACCGTTGCCAAAACTACACA
TACCAACCATTGTCCTGTATTTTACCCCTCCCTCTTTCGCCTTTTTCTCA
CGCCCTTCCAAACAGCTCTCTGGCCGAAGAAGCCTTTCTGGGCCGCCCGA
TCATATTCGCTGTCGTCCGTGTTGTGCCAAATATACGTCCACGCAAACAC
CTGCTCCGCACCCAGCACACAGAAAAAGAAGAAGTATAAGTGCTAACAGG
ATTACGTGAGCTTGGAGCAGCAGCAGTTCGCGCGAAAGAAAATGCAGAGC
CATCATCACCACCACCATCGCGGCCCCACGGCTACCATGGCGGCGAGCAC
CCACGTCGTCACTTTGGCAGGCCCGTCCGCGCAAGACCTGTCATCCTCGG
TGCAGCAAAAGGCAGGGCAAGGGCATATTTTAAGCTGCGGAAGCAGCAGC
ATTGGCTGTGGCAATAGCTCCCCAGgtgagaaagaccgaaaggaagggga
agggatcggttcgccacatggaaaacatcccaaggagtattttgagggcg
caccggggaattataaaaaaggagatatgttacattaaaccccacactgt
cttgattgatttcccctcacatgcacagGTCGAAAGCGCAAGTTTGAGGA
AGGGCCTTTCCCCCAAGCCACCAGTAGCAGCAGCAACAACATCAGCAACG
GCAACGGGAACGCTCCCACGCAACCTTTGTTTCCGACCTCAGCACTCAAA
CCTTTCCTTGTCGACAGCAGCAATAACCATGACAGAAACGGCGGAAATGG
TGGCAGCAGCCATGGCGGAGGAGATGAGGCAGACCGTCCCGGTGAGTTCT
CCGGCGTGAGCCATGCCAGCCACGGCGTCAAACAAGCAGTGTCTGCATTC
ACACCCTCGGCGCCACCACCGCCCACTCTTTCCTCTACCTTGCCATCATC
GACGGAGCCCGTATACGATGGCACTCTAATTGCTGCTGCGGCAGCTGCTT
CTGCTGCTGTAGGTGCTGCCGTTCTACCACACCCTGTCCCCTCCTCCCTC
ACCTCCTCGCGCCCCTCCTCCTCCATGCCTCCTCCCCCGCCCCGACCACC
CTATCAGCTCCAGCAACAGGAAGACCCCTCCTCCCCCCCATCTGCCCTCC
CTCCCTCCCCCTCCTTGATCCATCCCTTGTCTCCGCCTCCTCCTTCCCCT
CCTCCTCCTCCTCCCCCCTCCCCCTTGACGACCCTCCCCCAGGGGAAGGC
TTCCCCTCACTGGCCCGTCGAAAAGAGTTGA
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protein sequence of NO02G05570.1

>NO02G05570.1-protein ID=NO02G05570.1-protein|Name=NO02G05570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MQSHHHHHHRGPTATMAASTHVVTLAGPSAQDLSSSVQQKAGQGHILSCG
SSSIGCGNSSPGRKRKFEEGPFPQATSSSSNNISNGNGNAPTQPLFPTSA
LKPFLVDSSNNHDRNGGNGGSSHGGGDEADRPGEFSGVSHASHGVKQAVS
AFTPSAPPPPTLSSTLPSSTEPVYDGTLIAAAAAASAAVGAAVLPHPVPS
SLTSSRPSSSMPPPPPRPPYQLQQQEDPSSPPSALPPSPSLIHPLSPPPP
SPPPPPPPSPLTTLPQGKASPHWPVEKS*
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Synonyms
Publications