NO02G05550, NO02G05550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05550 vs. NCBI_GenBank
Match: CBJ32731.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.6 bits (187), Expect = 8.300e-11 Identity = 43/104 (41.35%), Postives = 55/104 (52.88%), Query Frame = 0 Query: 69 KNAWYIKMIDEPPGQLTRAFPEETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYDLS 173 K +K++D P + EE Q F IG +YN + + DL K+KL+ +AI LPE LQ A D P PL RR+ TYTPPIPGF+ Y LS Sbjct: 72 KTMTLLKLLDARPEPMPELSAEEKQRNF-DIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLS 174
BLAST of NO02G05550 vs. NCBI_GenBank
Match: XP_009529836.1 (hypothetical protein PHYSODRAFT_316187 [Phytophthora sojae] >EGZ16087.1 hypothetical protein PHYSODRAFT_316187 [Phytophthora sojae]) HSP 1 Score: 71.6 bits (174), Expect = 2.700e-9 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 70 NAWYIKMIDEPPGQLTRA--FPEETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYDLSGA 175 +A + +M+ GQ A + EE + + + IG +YN+ + + D+ K+ LK EAINALP ELQAEA D P P R + T+TPPIPGF +Y GA Sbjct: 50 DANFEQMLRAIKGQYPEAEEWTEEEKQRHQEIGRRYNIMSSIEHNHFMRDVQTKIDLKWEAINALPAELQAEALEDDMAPVPEERGMATWTPPIPGFR--RYTDEGA 154
BLAST of NO02G05550 vs. NCBI_GenBank
Match: CCI44866.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 71.6 bits (174), Expect = 2.700e-9 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0 Query: 81 PGQLTRAFPEETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGF 165 P + + F EE + + R IGH+YN + + + DL K+ LK +AINALP+ELQ EA D+ P P G I ++TPPI GF Sbjct: 78 PPENAKPFTEEEKEQHRIIGHRYNRMTSIKHNHWQRDLQTKIDLKWKAINALPKELQEEALEEDYDPIPPGSYIPSWTPPIKGF 161
BLAST of NO02G05550 vs. NCBI_GenBank
Match: CCA16140.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA25101.1 conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 71.2 bits (173), Expect = 3.500e-9 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0 Query: 81 PGQLTRAFPEETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGF 165 P + + F EE + + R IGH+YN + + + DL K+ LK +AINALP+ELQ EA D+ P P G I ++TPPI GF Sbjct: 62 PPENPKPFTEEEKEQHRIIGHRYNRMTSIKHNHWQRDLQTKIDLKWKAINALPKELQEEALQEDYDPIPPGSYIPSWTPPIKGF 145
BLAST of NO02G05550 vs. NCBI_GenBank
Match: OWZ23171.1 (putative mitochondrial protein [Phytophthora megakarya]) HSP 1 Score: 68.9 bits (167), Expect = 1.700e-8 Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0 Query: 70 NAWYIKMIDEPPGQLTRA--FPEETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYDLSGA 175 +A + +M+ GQ A + +E Q + + IG +YN + + D+ K+ LK EAINALP ELQAEA D P P R + T+TPPIPGF +Y GA Sbjct: 50 DANFEQMLRAIKGQYPEAEEWTDEEQKRHQEIGRRYNTMSSIEHNHLMRDVQTKIDLKWEAINALPVELQAEALEDDVAPAPEERGMATWTPPIPGFR--RYTDEGA 154
BLAST of NO02G05550 vs. NCBI_GenBank
Match: ETI47848.1 (hypothetical protein F443_07992 [Phytophthora parasitica P1569] >ETL94358.1 hypothetical protein L917_07634 [Phytophthora parasitica]) HSP 1 Score: 68.2 bits (165), Expect = 3.000e-8 Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 0 Query: 90 EETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYDLSGA 175 EE + + + IG +YN+ + + DL K+ LK EAINALP ELQ EA D +P P R + T+TPPIPGF +Y GA Sbjct: 72 EEEKQRHQEIGRRYNIMSSIEHNHLMRDLQTKIDLKWEAINALPAELQDEALENDVSPVPEERGMATWTPPIPGFR--RYTDEGA 154
BLAST of NO02G05550 vs. NCBI_GenBank
Match: XP_008904739.1 (hypothetical protein PPTG_10959 [Phytophthora parasitica INRA-310] >ETK87770.1 hypothetical protein L915_07819 [Phytophthora parasitica] >ETL41189.1 hypothetical protein L916_07749 [Phytophthora parasitica] >ETM47577.1 hypothetical protein L914_07712 [Phytophthora parasitica] >ETN10302.1 hypothetical protein PPTG_10959 [Phytophthora parasitica INRA-310] >ETO76553.1 hypothetical protein F444_08037 [Phytophthora parasitica P1976] >ETP17677.1 hypothetical protein F441_07962 [Phytophthora parasitica CJ01A1] >ETP45667.1 hypothetical protein F442_07930 [Phytophthora parasitica P10297] >KUF84559.1 hypothetical protein AM587_10003694 [Phytophthora nicotianae]) HSP 1 Score: 68.2 bits (165), Expect = 3.000e-8 Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 0 Query: 90 EETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYDLSGA 175 EE + + + IG +YN+ + + DL K+ LK EAINALP ELQ EA D +P P R + T+TPPIPGF +Y GA Sbjct: 72 EEEKQRHQEIGRRYNIMSSIEHNHLMRDLQTKIDLKWEAINALPAELQDEALENDVSPVPEERGMATWTPPIPGFR--RYTDEGA 154
BLAST of NO02G05550 vs. NCBI_GenBank
Match: XP_008621140.1 (hypothetical protein SDRG_16700 [Saprolegnia diclina VS20] >EQC25434.1 hypothetical protein SDRG_16700 [Saprolegnia diclina VS20]) HSP 1 Score: 67.0 bits (162), Expect = 6.600e-8 Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 0 Query: 74 IKMIDEPPGQLTRAFPEETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALP-EELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYD 171 +K D PP + T A E Q F IG KYN + R + DL K+ LK EAINALP EL+AEA DF+ P+ R T+TPPIPGF+ + D Sbjct: 54 LKGRDIPPPEWTEA---EKQEHFE-IGRKYNSMTSIRHNALMKDLQLKISLKWEAINALPTAELRAEALVEDFSLVPMTRGFPTWTPPIPGFKRFRDD 147
BLAST of NO02G05550 vs. NCBI_GenBank
Match: OQR89238.1 (hypothetical protein THRCLA_22722 [Thraustotheca clavata]) HSP 1 Score: 66.6 bits (161), Expect = 8.600e-8 Identity = 44/98 (44.90%), Postives = 55/98 (56.12%), Query Frame = 0 Query: 74 IKMIDEPPGQLTRAFPEETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALP-EELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYD 171 +K D PP + T EE Q F IG KYN + R + DL K+ LK EAINALP EL+AEA D + P+ R T+TPPIPGF+ + D Sbjct: 50 LKGRDIPPPEWTE---EEKQQHFE-IGRKYNSMTSLRHNALMKDLQTKIDLKWEAINALPTPELRAEALVEDLSLVPMSRGFPTWTPPIPGFKRFRED 143
BLAST of NO02G05550 vs. NCBI_GenBank
Match: XP_002908840.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY57654.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 65.1 bits (157), Expect = 2.500e-7 Identity = 38/85 (44.71%), Postives = 48/85 (56.47%), Query Frame = 0 Query: 90 EETQAKFRAIGHKYNVEYNRRASRHAGDLHRKVKLKLEAINALPEELQAEANTMDFTPFPLGRRITTYTPPIPGFEAGKYDLSGA 175 EE + + + IG +N + DL K+ LK EAINALP ELQ EA +D +P P R I T+TPPIPGF +Y GA Sbjct: 73 EEEKQRHQEIGRLFNRMSTIEHNHLMRDLQTKIDLKWEAINALPAELQTEALEIDVSPAPEERGIATWTPPIPGFR--RYTDEGA 155 The following BLAST results are available for this feature:
BLAST of NO02G05550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05550 ID=NO02G05550|Name=NO02G05550|organism=Nannochloropsis oceanica|type=gene|length=1183bpback to top protein sequence of NO02G05550.1 >NO02G05550.1-protein ID=NO02G05550.1-protein|Name=NO02G05550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=176bpback to top Synonyms
Publications
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