NO02G05540, NO02G05540 (gene) Nannochloropsis oceanica

Overview
NameNO02G05540
Unique NameNO02G05540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1999
Alignment locationchr2:1475104..1477102 -

Link to JBrowse

Properties
Property NameValue
Descriptionmagnesium transporter 9
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1475104..1477102 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO02G05540 vs. NCBI_GenBank
Match: CBN79150.1 (similar to putative mitochondrial rna splicing protein OR magnesium ion transporter Mrs2 [Ectocarpus siliculosus])

HSP 1 Score: 197.2 bits (500), Expect = 1.500e-46
Identity = 127/346 (36.71%), Postives = 195/346 (56.36%), Query Frame = 0
Query:  260 RFLDVVSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALALVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVVAVVGGVTMAAVLALA 606
            R + V+ + ++G  I+  + + +LA EL CP RDLR+ D +FP    +VLAR+ +I+  +  ++ VI  +E++LF P   D L++VP +Q+++           + G  A+ PFE   +E  L +VC  + E  + V P +  +L   K    + +S  K L  LLPL+N+L EL  T+  + K +N+VL++DEDM +MYL+                                        HQEIEM+FENYL+Q+E   +++ E+Q+ +RNTE+ VEI+LD+LRN ILRFEL+L+I    V+ G LVTG+FGMNLLSG E  P  F+   V GG+    +L++A
Sbjct:  107 RSVPVLRLSSDGAAIETALSRQQLAAELTCPLRDLRMADPTFPGQFPSVLARRGSIIFSVGEVKAVILSNEVLLF-PTKPDVLSIVPAVQEKI-----------RLGIRAV-PFEQTVMECCLKHVCKDLLESARNVEPRLRTVLDSFK---TSKNSLIKSLHRLLPLKNELDELKETLVTVCKCMNEVLMNDEDMALMYLTD---------------------------NECKSTARDLHQHQEIEMLFENYLLQVELLASDVIELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQTFW--QVTGGIYGCIMLSIA 407          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: XP_005536254.1 (similar to mitochondrial magnesium transporter Mrs2p [Cyanidioschyzon merolae strain 10D] >BAM79968.1 similar to mitochondrial magnesium transporter Mrs2p [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 169.9 bits (429), Expect = 2.500e-38
Identity = 128/361 (35.46%), Postives = 184/361 (50.97%), Query Frame = 0
Query:  274 IQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALALVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLK----------------------FRHGTLSSFPK---LLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVVAVVGGVTMAAVLALAFIYG 610
            IQR++ K+ LA  LR P RDLR++D +F +    VLAR++AIV+ ++ +R V+  D + LFDP      A +P L  +LA  +   A           PFEL +LE++L +VC+++   ++ + P I  +L  L                          G  SS P    +LD LL  +N L+EL     +LR ALN+VLLSDEDM  MYLS   +                                  + H+E+EMMFENYL Q++   +EI     AI++TED V+I+LD LRNRILR +LVL + +  +S G LV  +FGMNL S +E    AF  ++V GG  +  +  L F+ G
Sbjct:  144 IQRRLAKALLAARLRLPLRDLRVVDPAFRNEAPVVLARQSAIVIHLEHIRAVVEADRVTLFDPEQPAVEAFLPQLHARLALSSPRPAL----------PFELRALESILVDVCNSLMREMRYLVPGIESLLRALSSDDVAGAXXXXXXXXXXXXXXXXXXGDASSIPPDVIMLDRLLGAKNKLNELQNRATQLRNALNEVLLSDEDMSEMYLSTKAE---------------------------SGHRRRVDQHEEVEMMFENYLKQIDSLVSEIASRTQAIQSTEDFVQIKLDALRNRILRLDLVLKLGSVSLSSGALVAAIFGMNLHSTLEESQLAF--LSVTGG--LVGISGLVFLGG 463          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: OSX77355.1 (hypothetical protein BU14_0152s0050 [Porphyra umbilicalis])

HSP 1 Score: 159.1 bits (401), Expect = 4.500e-35
Identity = 125/353 (35.41%), Postives = 180/353 (50.99%), Query Frame = 0
Query:  262 LDVVSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALALVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLS--SFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNI-VTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVVAVVGGVTMAAVLALAFIYGVR 612
            L  + I  NG    R V+K+++A EL    RDLR++D +F +    VLAR  A+V+ +  +R ++    ++LFDP      AL P L+ +L   A               PFE+ +LEAVL +VC  +   +  + P +   L D+  + G        + LD+LLPL   L+EL  +V  +R ALN+VL+SDEDM  MYLS                                     DE H EIEMM E YL Q++    E+  +  A++ TE+  +I+LD  RNRILR E+ LN+   SV S  C   GLFGMNLLSG E  P AF++V+V+  V +AA++  + I  +R
Sbjct:   62 LAALEILPNGAVSARHVQKADVAAELSLNLRDLRVVDPTFRNESPVVLARPTAMVIHLLHVRILVTASRVLLFDPHHPAVAALTPRLRARLIDAAHPL------------PFEMRALEAVLVDVCCGIRAEVGRLKPKVQAAL-DVMSKDGEFGGRGVTEGLDQLLPLEMGLNELTGSVGMVRTALNEVLMSDEDMSDMYLS--------------------------WKSATGEERGVDE-HDEIEMMVEGYLKQVDAVAYELGRLLRAVKTTENVTQIRLDASRNRILRLEVFLNLGAVSVASAACF-AGLFGMNLLSGWEEDPHAFWMVSVM-SVGVAAIVFRSVIVWLR 372          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: XP_005705749.1 (magnesium transporter CorA-like family protein (MRS2-7) isoform 1 [Galdieria sulphuraria] >EME29229.1 magnesium transporter CorA-like family protein (MRS2-7) isoform 1 [Galdieria sulphuraria])

HSP 1 Score: 144.4 bits (363), Expect = 1.100e-30
Identity = 96/301 (31.89%), Postives = 148/301 (49.17%), Query Frame = 0
Query:  265 VSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALALVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFG 566
            + +  +G    +QV+K+ELA  L+   RDLR++D SF +     LARKN +V+  + +R VI+   ++LFDP        +P L+ ++               +   PFE  SLEA+L +VC ++  +L+ + P +  +L  L        +    LD LLPL+N L+E    ++E   ALNDVL SDEDM  MYL+   +                                  + H+E+EMMFE YL Q++    E+      +R TE+  +I+LD +RNRILR E+ LN+    +S G
Sbjct:   15 IEVDIHGNMTSKQVQKTELASFLKLNFRDLRVVDPSFRNESPVFLARKNVVVVHFEHIRAVIQATSILLFDPPHPSVQNFIPSLRTRIR------------DRSHPLPFEFRSLEAILIDVCTSLSRQLRTLVPAVENVLDTLSSNDTGADTVRSCLDRLLPLQNSLNEFEVKIREAHTALNDVLRSDEDMSEMYLTTKLE---------------------------TGHRRRVDQHEEVEMMFETYLKQIDSMLNEVASTIQTVRVTENITQIRLDAMRNRILRLEVYLNLGMLSLSTG 276          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: XP_012758407.1 (hypothetical protein SAMD00019534_009860 [Acytostelium subglobosum LB1] >GAM17811.1 hypothetical protein SAMD00019534_009860 [Acytostelium subglobosum LB1])

HSP 1 Score: 142.1 bits (357), Expect = 5.700e-30
Identity = 103/351 (29.34%), Postives = 172/351 (49.00%), Query Frame = 0
Query:  260 RFLDVVSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALA---LVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVVAVVGGVTMAAVLALAFI 608
            R   V+ +  +G  I + + K+ L++E++   RDLR +D+SFP  +  +LAR    ++ +  +R +++ D++I FDP  ++ L    LVP+L++ L               T   PFE   LEA+L  +C  +    Q +   I + L  L       +    L + LL  +  L++   T +E+  AL+ +L SDEDM +MYLS                                        H+E+E++ ENY+ QLE    EI +++  + +TE+ V  QLD  RN+++R  L L++VT     G +VTG FGMNL++G E  P +F+ V+  GGV +  +   A++
Sbjct:  123 RSFKVLEVDLSGNLIDQIIFKNNLSIEMKLQARDLRTIDSSFPPQMPAILARDKVFIVSIGYIRAIVQHDKIIFFDP--QNPLIRNDLVPILREYLGNQNLFFT------ETLTLPFEFKVLEAMLVFICKKLTAEHQRICTLIAKELESL-----NENPEHNLENLLLFHKKGLNQFEVTTKEIMDALSRLLESDEDMALMYLS---------------------------FRSITGGTRKRNQHEELEILLENYMRQLEQISNEISQLKETLSSTEEFVNFQLDTARNKMMRMNLTLSLVTMSAGMGSMVTGFFGMNLMNGFEHAPFSFFYVS--GGVLLGGLSVFAYV 431          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: XP_004361768.1 (putative mitochondrial rna splicing protein [Cavenderia fasciculata] >EGG23917.1 putative mitochondrial rna splicing protein [Cavenderia fasciculata])

HSP 1 Score: 139.4 bits (350), Expect = 3.700e-29
Identity = 98/341 (28.74%), Postives = 174/341 (51.03%), Query Frame = 0
Query:  260 RFLDVVSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDAL-ALVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLSSFPK--LLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVV--AVVGG 596
            R   V+ +  NG  + + + K+ L+ E++   RDLR +D+SFP+ +  +LAR    ++ +  ++ +++ +++ILFDP +      LVP +++ L +   L  +      T   PFE   LEA+L  VC       ++ + H  RI G ++     L+  P+  L +  L  +  L++   T++E+  AL+++  SDEDM +MYL+                                        H+E+E++ E Y+ QLE    EI +++  + +TE+ V  QLD  RN+++R  L++++VT     G +++G FGMNL +G E HP +FY+V   +VGG
Sbjct:  173 RSFKVLEVGINGVAMDQIIFKNTLSPEMKLQARDLRSIDSSFPAQMPAILARDKVFIISIGFIKAIVQYNKIILFDPQNTMVRNELVPSIKEYLGSQNNLFFS-----ETLTLPFEFKVLEAILIYVCK------KLTTEH-QRIFGLIQKELDLLNENPEHNLENLFLYHKKGLNQFEVTIKEITDALDNLHQSDEDMALMYLT---------------------------FRNATGGTRKKNQHEELEILLETYMRQLEQISNEITQLKETLSSTEEFVNFQLDTARNKMMRMNLMVSLVTMSAGMGSMLSGFFGMNLFNGFETHPYSFYLVCTCIVGG 474          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: PIA17550.1 (cora-domain-containing protein [Coemansia reversa NRRL 1564])

HSP 1 Score: 137.1 bits (344), Expect = 1.800e-28
Identity = 110/355 (30.99%), Postives = 176/355 (49.58%), Query Frame = 0
Query:  265 VSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFD----PFSKDALALVPLLQQQLATVAALTAAAGKGGAT---ALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVVAVVGGVTMAAVLALAFIYGVRS 613
            + ++ N T    + +KSEL  +     RDLR +D+ F + +  +L RK+AI++ +  +R +I  D ++LFD    P + +   L+  LQ++L + +  T     G A    +  PFE  +LEAVL +V  T+    +++   +  +L  L+      S     L ELL     LS     V  +R A+ +VL  DED+  MYL+Q  +                                TD+ H+E+E+M E YL Q+E     I  V   +R TED V I LD  RN +L  E+ L I+T  +S G  ++GLFGMNL++  E+HP+AF  V+    + + +++AL  + G+RS
Sbjct:  196 LDMHGNITVRAGEFQKSELCAQHGLQARDLRKIDSKFVNQMPAILVRKHAILVNLLHIRALIEADRIVLFDSIGTPSNYNQSILIYELQERLRSSSTRTITTDSGIAVDTESTQPFEFRALEAVLISVVSTLQSDEEVLVNLVQNLLAYLE-----ASVDRSKLRELLQYSKRLSRFGQKVLNIRDAIEEVLEQDEDLAGMYLTQKLQ---------------------------ATHRETDD-HEEVELMMETYLKQVEEIVNHIESVSSHVRTTEDVVNIILDSQRNSLLLLEIRLTILTVALSSGTFLSGLFGMNLINSFESHPNAFIAVS---AIALFSIIALT-VTGLRS 513          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: XP_005705748.1 (magnesium transporter CorA-like family protein (MRS2-7) isoform 2 [Galdieria sulphuraria] >EME29228.1 magnesium transporter CorA-like family protein (MRS2-7) isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 132.9 bits (333), Expect = 3.400e-27
Identity = 96/320 (30.00%), Postives = 148/320 (46.25%), Query Frame = 0
Query:  265 VSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAI-------------------VLRMDCLRCVIRRDELILFDPFSKDALALVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFG 566
            + +  +G    +QV+K+ELA  L+   RDLR++D SF +     LARKN +                   V+  + +R VI+   ++LFDP        +P L+ ++               +   PFE  SLEA+L +VC ++  +L+ + P +  +L  L        +    LD LLPL+N L+E    ++E   ALNDVL SDEDM  MYL+   +                                  + H+E+EMMFE YL Q++    E+      +R TE+  +I+LD +RNRILR E+ LN+    +S G
Sbjct:   15 IEVDIHGNMTSKQVQKTELASFLKLNFRDLRVVDPSFRNESPVFLARKNVVVGIPRFFCPVLLIGFGYLKVVHFEHIRAVIQATSILLFDPPHPSVQNFIPSLRTRIR------------DRSHPLPFEFRSLEAILIDVCTSLSRQLRTLVPAVENVLDTLSSNDTGADTVRSCLDRLLPLQNSLNEFEVKIREAHTALNDVLRSDEDMSEMYLTTKLE---------------------------TGHRRRVDQHEEVEMMFETYLKQIDSMLNEVASTIQTVRVTENITQIRLDAMRNRILRLEVYLNLGMLSLSTG 295          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: XP_643405.1 (hypothetical protein DDB_G0275813 [Dictyostelium discoideum AX4] >EAL69657.1 hypothetical protein DDB_G0275813 [Dictyostelium discoideum AX4])

HSP 1 Score: 131.7 bits (330), Expect = 7.700e-27
Identity = 93/343 (27.11%), Postives = 162/343 (47.23%), Query Frame = 0
Query:  262 LDVVSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALALVPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMH---ERLQMVSPHIMRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYV----VAVVGGVT 598
            L+V++I  NG   + +  K  L+ EL+   RDLR +D SFP  + T+L R   I++ + C+R +++ + ++LFD  +           +    +    +   +G      PFE    E++L  +C  +     R+Q +    +++L +        +    L + LL  +  L++    ++E+  A+ D+L +DEDM +MYLS                                        H EIE++ E Y  QLE   + I +++  + +TE+ V  QLD  RN+++R  L+L++VT     G ++ G FGMNL+SG E HP AF +    +A +GG+T
Sbjct:  146 LNVLTIDINGNRSEERFYKGSLSNELKLQARDLRTIDPSFPPQMPTILVRDKVILISIGCVRAIVQYNRVLLFDTGNTQI--------KDETAIGIHESLTSQGTEYLPLPFEFKVFESILDLICRKLEFEFRRMQSLIEKELQMLNE--------NPEHNLEELLLYHKKGLNQFEVKIKEIIDAITDLLEADEDMALMYLS---------------------------FRHATGGARKKNQHDEIEILLETYTRQLELLSSNISQLKETLNSTEEFVNFQLDTARNKMMRMNLMLSLVTISTGLGSVIAGTFGMNLISGFEQHPLAFPIACGSIACIGGLT 445          
BLAST of NO02G05540 vs. NCBI_GenBank
Match: XP_004337149.1 (mitochondrial inner membrane magnesium transporter lpe10, putative [Acanthamoeba castellanii str. Neff] >ELR15136.1 mitochondrial inner membrane magnesium transporter lpe10, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 125.2 bits (313), Expect = 7.200e-25
Identity = 103/347 (29.68%), Postives = 166/347 (47.84%), Query Frame = 0
Query:  265 VSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTSFPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALAL---VPLLQQQLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHIMRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLLSDEDMEMMYLSQPYKIHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTDESHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVVAVVGGVTMAAVLALAFIY 609
            +++   G+  +  + K++L+ ELR   RDLR +D SFP+ +A  L R   I++ ++  + +++ + LILF   +     L    P LQ +L         A  GG      FE   +EAVL  +C T++ER   +   I  +L  L+        +   L +L      L+     V E+R AL+ VL SDED+  MYLS                                    TD+ H+E E++ ENY+ QL+   +E+ E+Q +I  +E+   + LD  RN+I++  L+L + T   +   +VTG+FGMNL + +E   SAF V    GG+T++   + A IY
Sbjct:   87 ITVDEAGSFREVSLTKADLSRELRVQKRDLRAVDVSFPNQLACFLVRDGVILINLEAFKAIVKHNSLILFTTETARGTVLQQFCPFLQYRLTR----EVGAHVGG------FEFRVVEAVLTVLCDTLYERYGELKARIDHLLFGLEQATNGQDDYLPFLADLSHHNKTLNSFQKRVHEVRGALHQVLESDEDLAAMYLS--------------------------VQAATGHRRRTDQ-HEEAEILIENYVAQLDDILSEVAELQSSIDVSEEYFRLTLDSQRNKIMKMNLLLTLGTFSTACAGVVTGVFGMNLQNFLETSESAFLV--TTGGLTISMAASFASIY 394          
The following BLAST results are available for this feature:
BLAST of NO02G05540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN79150.11.500e-4636.71similar to putative mitochondrial rna splicing pro... [more]
XP_005536254.12.500e-3835.46similar to mitochondrial magnesium transporter Mrs... [more]
OSX77355.14.500e-3535.41hypothetical protein BU14_0152s0050 [Porphyra umbi... [more]
XP_005705749.11.100e-3031.89magnesium transporter CorA-like family protein (MR... [more]
XP_012758407.15.700e-3029.34hypothetical protein SAMD00019534_009860 [Acytoste... [more]
XP_004361768.13.700e-2928.74putative mitochondrial rna splicing protein [Caven... [more]
PIA17550.11.800e-2830.99cora-domain-containing protein [Coemansia reversa ... [more]
XP_005705748.13.400e-2730.00magnesium transporter CorA-like family protein (MR... [more]
XP_643405.17.700e-2727.11hypothetical protein DDB_G0275813 [Dictyostelium d... [more]
XP_004337149.17.200e-2529.68mitochondrial inner membrane magnesium transporter... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL018nonsL018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR003ngnoR003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007202NSK007202Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05540.1NO02G05540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668077gene_1141Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05540.1NO02G05540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05540 ID=NO02G05540|Name=NO02G05540|organism=Nannochloropsis oceanica|type=gene|length=1999bp
ATGAAAAGAAGAAGACCGTCAGCCATCGGCGCCCGAGCACTCCGGGCCCT
TGTTTTACTGCTCCTTGGCCTCATCGTTATCATAGCCGCCGACGGCCCAG
CAGGGGACTTTCATCACTCAGCTCCATGGCAGCCAGCCCCCACGAGTCTA
CATATAGAGCGTGCCCGTGCGCCTCGAAGACTGCCTTACTGGCGACTTGC
AGCTCGTGGTGGTGATGGTAGGGCGGGTTGGCGAGGCGCGGACAAAGAGA
CCTTGCCACTTGGAGGGGTCCGCGGTGGGGCCATCTTTCATCGGAACAAG
AACAACAACACCACGCCCGCCAGTCCCACCAAAGCTGCAGCTGCGTTGCG
ACATGACCAGCAAGGGATACCAGAGGCCGTCGAAGGGAAACAGCAGCCGG
CGATCTCCTCCCGAGTGTGGGCTCGCCTGAGTGGTGGAGTTTCAGGAACG
GAAGCGAACGAGAGGAAAAACACTCAGGAATCCAAACCGCCACCGACACC
CTCACAATCATCATCATCAATGACGCCCCTATCACCATCGGTAGTAGCAG
CTTCTACACCCTCGGCAGTGCCTACTCCCTCTATGCCTGCTTCTGCCAAG
ACGGCGTCCTCGCCAGGACCACCCCTCCCGCCGCCGCTGCCGCCGCAGCA
GCAACAGCAACCTCATCGGCAGCAATCACAACCATCCTCCCTACCGTCGA
TACCTCATATACCCCCTTTTTCCTCAACTCCAGCAATTACAGTTCCAGCT
TCACCAGCAAGCAGCAGCAGCCTCgtcagctatacatcaaccaccacgcc
cccccctcccccctccccccctcctcgccgccaccgctgctgccgccgcc
ttactttcagccaataacaatgcccaatacggcaacggaatcttcctccc
cctcccaaccgtcactcccccaaagCCTCGTTTCCTGGACGTGGTCAGTA
TATACGCTAATGGAACAACTATACAGCGACAAGTCCGAAAATCTGAACTG
GCGGTCGAACTTCGGTGCCCAACGCGGGACTTGCGCCTGCTCGATACCTC
TTTCCCTAGCAGTATTGCCACGGTCTTGGCACGAAAAAATGCGATTGTAT
TGAGGATGGATTGTTTGCGGTGTGTGATTCGACGGGATGAACTGATCCTT
TTTGACCCCTTCAGCAAGGACGCCCTTGCGCTTGTCCCGCTCCTTCAACA
GCAACTTGCCACAGTTGCAGCGCTGACAGCCGCGGCTGGAAAAGGTGGGG
CTACTGCTTTGTCCCCTTTCGAGTTATTGTCATTGGAGGCAGTGTTGGCG
AATGTCTGTCATACGATGCATGAACGTTTGCAGATGGTCTCGCCGCATAT
CATGAGGATATTAGGGGACCTCAAATTTAGACATGGCACCTTATCTTCAT
TCCCTAAGCTTCTAGATGAGTTGTTGCCCCTTCGAAATGACCTGAGTGAG
CTCCATTATACTGTGCAGGAGCTACGGAAGGCCTTGAATGATGTTTTGCT
CTCGGATGAAGATATGGAGATGATGTATTTGAGTCAGCCTTATAAAATTC
ACCTTCCTTCTTCTTCCTCCCCCTCGCCCTCCCCCAGTTCCTCGTTGTCG
ATGGGGCAACGCTCATCGAAGCACCATCGGGGGGGAGGGGGAACGGATGA
GAGCCACCAGGAGATTGAGATGATGTTTGAGAACTATTTGATGCAATTAG
AGTGGGCGGACACGGAAATAAGAGAAGTGCAGCACGCGATTCGCAACACG
GAGGACACTGTGGAGATCCAGCTTGATTTACTCAGAAATCGGATTTTGAG
GTTTGAGTTAGTTCTAAATATCGTCACGAGTGTCGTGTCATTTGGATGTT
TGGTCACGGGCCTTTTCGGCATGAATCTCTTGTCCGGGATGGAGGCACAT
CCGTCTGCTTTTTATGTCGTTGCCGTGGTTGGGGGGGTGACGATGGCGGC
GGTATTGGCCTTGGCGTTCATTTATGGGGTACGATCGAACATTTTCTAG
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protein sequence of NO02G05540.1

>NO02G05540.1-protein ID=NO02G05540.1-protein|Name=NO02G05540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=616bp
MKRRRPSAIGARALRALVLLLLGLIVIIAADGPAGDFHHSAPWQPAPTSL
HIERARAPRRLPYWRLAARGGDGRAGWRGADKETLPLGGVRGGAIFHRNK
NNNTTPASPTKAAAALRHDQQGIPEAVEGKQQPAISSRVWARLSGGVSGT
EANERKNTQESKPPPTPSQSSSSMTPLSPSVVAASTPSAVPTPSMPASAK
TASSPGPPLPPPLPPQQQQQPHRQQSQPSSLPSIPHIPPFSSTPAITVPA
SPASSSSLPRFLDVVSIYANGTTIQRQVRKSELAVELRCPTRDLRLLDTS
FPSSIATVLARKNAIVLRMDCLRCVIRRDELILFDPFSKDALALVPLLQQ
QLATVAALTAAAGKGGATALSPFELLSLEAVLANVCHTMHERLQMVSPHI
MRILGDLKFRHGTLSSFPKLLDELLPLRNDLSELHYTVQELRKALNDVLL
SDEDMEMMYLSQPYKIHLPSSSSPSPSPSSSLSMGQRSSKHHRGGGGTDE
SHQEIEMMFENYLMQLEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILR
FELVLNIVTSVVSFGCLVTGLFGMNLLSGMEAHPSAFYVVAVVGGVTMAA
VLALAFIYGVRSNIF*
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Synonyms
Publications