NO02G05440, NO02G05440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G05440 vs. NCBI_GenBank
Match: EWM30149.1 (hypothetical protein Naga_100115g7 [Nannochloropsis gaditana]) HSP 1 Score: 429.1 bits (1102), Expect = 1.100e-116 Identity = 214/301 (71.10%), Postives = 236/301 (78.41%), Query Frame = 0 Query: 1 MRPYRVLLSLAVLVPFLALPS----------------------GTKAAGATRGVTDGEPETAEAHCCGMKGLGGAKVEVMCHPDTVAMGKTFTVNVNFTSDVKRPVDVHVDVLNAQTKAFYAGKWEEFDTQAGAASLTIKMPEWGVTEPFLWKVFVTPRGEPFPNMLAETGFVAHLADYVKNDCQSFKSYGFNPPEMKDNAKKVDFVALQRVPKELIPGTTATVEVEYNMVGARAATLSASLMRKGPNIQISSTGDAAKPGQNKMKLMLPVPGDAPREAVYIVVTLTPEGASWEDRLAEDR 280 M+ +R L+ LA LVPFLAL S G + ATRG TDGEP TAE HCCGMKGLGGA +EVMCHP+TVAMGK FTVNV +TSD+KRPVDVHVDVLNA TKAFYAGKWEEFDTQAG SLTI+MP WGV EPFLWKVF+TPRGEPFPNMLAETGFVAHLADYVKNDC FKSYGF+PPE+ +N K VDFVALQ+VP L PG+ A V+VEYN+VGA A LS +LMRKGPN ISS D A PGQNK+ L LPVP DAP+EAVYIVVTLTP+GASWEDRLAED+ Sbjct: 81 MQLHRTLIGLAALVPFLALTSAEVEQFEIFPGQATWDSSIELPGMSSKAATRGRTDGEPTTAEGHCCGMKGLGGATIEVMCHPETVAMGKPFTVNVKYTSDIKRPVDVHVDVLNAHTKAFYAGKWEEFDTQAGEVSLTIQMPSWGVEEPFLWKVFLTPRGEPFPNMLAETGFVAHLADYVKNDCAPFKSYGFDPPELANNVKTVDFVALQKVPAVLTPGSQAMVDVEYNLVGAAKAILSVALMRKGPNTIISSFADLAAPGQNKVSLPLPVPYDAPKEAVYIVVTLTPDGASWEDRLAEDQ 381
BLAST of NO02G05440 vs. NCBI_GenBank
Match: EWM25360.1 (hypothetical protein Naga_100005g21 [Nannochloropsis gaditana]) HSP 1 Score: 131.0 bits (328), Expect = 6.200e-27 Identity = 75/229 (32.75%), Postives = 125/229 (54.59%), Query Frame = 0 Query: 55 VEVMCHPDTVAMGKTFTVNVNFTSDVKRPVDVHVDVLNAQTKAFYAGKWEEFDTQAGAASLTIKMPEWGVTEPFLWKVFVTPRGEPFPNMLAETGFVAHLADYVKNDCQSFKSYGFNPPEMKDNAKKVDFVALQRVPKELIPGTTATVEVEYNMVGARAAT-LSASLMRKGPNIQISSTGDAAKPGQNKMKLMLPVPGDA-PREAVYIVVTLTPEGASWEDRLAEDRTY 282 ++V+C P +VA+ F VN+ + + RP+ +HVD+LNA T + AG + AG + I +P+ T PF W ++ P+ E +PNMLA T F A L V C ++ +P + D D+V ++ P G VEV+YN++ + + +SA+L+R N ++S + AK G++ + + + VP DA E VY++ L P G ++ +R+AEDR + Sbjct: 38 LKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKT-PFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVD----FDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVW 261
BLAST of NO02G05440 vs. NCBI_GenBank
Match: EWM25453.1 (hypothetical protein Naga_100005g20 [Nannochloropsis gaditana]) HSP 1 Score: 131.0 bits (328), Expect = 6.200e-27 Identity = 75/229 (32.75%), Postives = 125/229 (54.59%), Query Frame = 0 Query: 55 VEVMCHPDTVAMGKTFTVNVNFTSDVKRPVDVHVDVLNAQTKAFYAGKWEEFDTQAGAASLTIKMPEWGVTEPFLWKVFVTPRGEPFPNMLAETGFVAHLADYVKNDCQSFKSYGFNPPEMKDNAKKVDFVALQRVPKELIPGTTATVEVEYNMVGARAAT-LSASLMRKGPNIQISSTGDAAKPGQNKMKLMLPVPGDA-PREAVYIVVTLTPEGASWEDRLAEDRTY 282 ++V+C P +VA+ F VN+ + + RP+ +HVD+LNA T + AG + AG + I +P+ T PF W ++ P+ E +PNMLA T F A L V C ++ +P + D D+V ++ P G VEV+YN++ + + +SA+L+R N ++S + AK G++ + + + VP DA E VY++ L P G ++ +R+AEDR + Sbjct: 38 LKVLCMPKSVALNTPFYVNLEYAAPFSRPMAIHVDLLNADTNEWQAGDVVKVTGAAGKVTSRIVVPQDAKT-PFKWFAYIAPQDENWPNMLATTTFTADLGAKVMAPCAPLRNTARSPSKPVD----FDYVLVKDYPSAFHAGAKTPVEVQYNLMPDQPSMYVSATLLRASDNTVVASAQEKAKEGEHDLTMFMDVPADALMSEPVYLMAVLKPAGKAFSERVAEDRVW 261
BLAST of NO02G05440 vs. NCBI_GenBank
Match: EWM24789.1 (hypothetical protein Naga_100912g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 70.9 bits (172), Expect = 7.700e-9 Identity = 51/170 (30.00%), Postives = 75/170 (44.12%), Query Frame = 0 Query: 55 VEVMCHPDTVAMGKTFTVNVNFTSDVKRPVDVHVDVLNAQTKAFYAGKWEEFDTQAGAASLTIKMPEWGVTEPFLWKVFVTPRGEPFPNMLAETGFVAHLADYVKNDCQSFKSYGFNPPEMKDNAKKVDFVALQRVPKELIPGTTATVEVEYNMV--GARAAT-LSASLM 222 + V+C P V G+ F VN+ FT RP+D+ L+ TK +Y G Q G S + +T P +K +++PRGE PN + T L C + + ++V L VPK L PG A + + YN+V +AAT + SLM Sbjct: 147 IGVLCQPRAVQPGQPFVVNLWFTQTHPRPMDLIAVALDGDTKEYYGGFQVPVKAQQGHVSGRFDLRPAPLTAPLKFKAWLSPRGEVAPNYVTYTMLNIPLGPETVQPCNPDPDNEWT----ETGIPPANWVELHDVPKVLTPGEKANIRLVYNLVPESQKAATNATVSLM 312 The following BLAST results are available for this feature:
BLAST of NO02G05440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05440 ID=NO02G05440|Name=NO02G05440|organism=Nannochloropsis oceanica|type=gene|length=1091bpback to top protein sequence of NO02G05440.1 >NO02G05440.1-protein ID=NO02G05440.1-protein|Name=NO02G05440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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