NO02G05390, NO02G05390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05390 vs. NCBI_GenBank
Match: EWM30155.1 (cyclin-l1 [Nannochloropsis gaditana]) HSP 1 Score: 260.4 bits (664), Expect = 8.100e-66 Identity = 166/349 (47.56%), Postives = 196/349 (56.16%), Query Frame = 0 Query: 28 VRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRM--QILRTAFTADVAGGNKGDKG--GEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPRKHNFVIKSSIRFRNTS----------------------------GEMPVNRGMWTVLGAKAEDVEACSNDLLALYEEG 342 VRVLLDAG RLRLPQETIATA +IFHRFFA RSL ++ +R+DVVL TCLFLA+KVEEQPRRIRDAINCVY ++++ Q T F A GD ER +G+ E + A + + IL LDRGYW++KESVVD EQLVLR+LGFDL+T+ YR+LLNYARSLRARPV VEVAWALLNDSLFSPA CL PS AQAVA L LAQR L + +KH F S+ R + GE+ VN MW VLGA+ +DV+A + LL LYEEG Sbjct: 39 VRVLLDAGRRLRLPQETIATAALIFHRFFAVRSLREYARNRRLDVVLTTCLFLASKVEEQPRRIRDAINCVYVVRKQLLAQAQGTRFVDTCAPSEGGDAETLSERGWVHGNGNGGAPGELKGNTDLARSVKGN-ILSLDRGYWDLKESVVDTEQLVLRILGFDLETFMSYRLLLNYARSLRARPVLVEVAWALLNDSLFSPACCLALPSHAQAVAALDLAQRLLTAAGGDRDGENEDGPPGQRGGLKLAIDKDMAPIRETSTGVGGKGQLKKHTFANLSTSTARTVAYSRQGHKSEGRFSQDGKFEPLDFNCHDPGELRVNSRMWNVLGAQGKDVQAWCDSLLHLYEEG 386
BLAST of NO02G05390 vs. NCBI_GenBank
Match: CBN76575.1 (cyclin [Ectocarpus siliculosus]) HSP 1 Score: 131.0 bits (328), Expect = 7.400e-27 Identity = 81/217 (37.33%), Postives = 103/217 (47.47%), Query Frame = 0 Query: 29 RVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQR 246 +VL AG RLR PQ T TAV++FHRF + + H ++ DV+L TCLFLA KV E PRR+RD IN ++ Q D LD+ YW MKE +V+ EQ++LR + F +D PYR+LLNYARSLR AW L ND LF P L+ P A A AV+ +A R Sbjct: 39 KVLFRAGYRLRFPQGTTGTAVLLFHRFLIQERVGKH--RRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQ-------------------------------------------------DEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPR-ALSAPPPAVACAVIRMAAR 203
BLAST of NO02G05390 vs. NCBI_GenBank
Match: CEP00438.1 (hypothetical protein PBRA_001492 [Plasmodiophora brassicae]) HSP 1 Score: 107.1 bits (266), Expect = 1.100e-19 Identity = 76/231 (32.90%), Postives = 105/231 (45.45%), Query Frame = 0 Query: 17 ASESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 A E +++ ++ D G RL++PQ TIATA IFHRFFAK L+DH MD+ TCLF+A K +E PRR+RD IN VY +R D P AD +W+MKE +++ E+LVLRV+ FD+D P+ +++ R LRA ++LNDS P CL A ++LA L Sbjct: 4 ADEGSVIRFQATTLIQDVGIRLQVPQMTIATAQTIFHRFFAKEPLADH---DPMDIA-QTCLFVAGKSQETPRRLRDVINTVY------------------------------------RYRNPD-------LPPLEVADP-------FWQMKEHLIESERLVLRVIAFDVDVVPPHAYAVHFLRDLRASNDLANCTLSILNDSCRIP-LCLHYEPHVIACGAMYLATELL 179
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_012680357.1 (PREDICTED: cyclin-L2 [Clupea harengus] >XP_012680358.1 PREDICTED: cyclin-L2 [Clupea harengus]) HSP 1 Score: 97.8 bits (242), Expect = 7.000e-17 Identity = 70/232 (30.17%), Postives = 109/232 (46.98%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVT--VEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 +E L + C R+ AG LRLPQ +AT I+F RF+ +S H ++V M C+ LA+K+EE+PRR+RD +N YF + + R G A +P +PLD Y MK V+ E+ +L+ LGF + P++I++ Y + L + V++AW +NDSL + F R ++ A A ++L+ RFL Sbjct: 51 TEEQLRIRGCERIQA-AGILLRLPQVAMATGQILFQRFYYCKSFVRHCG----EIVAMACVHLASKIEEEPRRVRDVLNVFYFLK---------------------------------------DSRGGKARSP-------MPLDASYISMKSQVIKAERRLLKELGFCVHVKHPHKIIVMYLQVLECEKNSELVQMAWNYMNDSLRTDVFLRFR-AETVACACIYLSVRFL 230
BLAST of NO02G05390 vs. NCBI_GenBank
Match: ORY05601.1 (cyclin-like protein, partial [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 96.3 bits (238), Expect = 2.000e-16 Identity = 69/218 (31.65%), Postives = 107/218 (49.08%), Query Frame = 0 Query: 31 LLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAIN-CVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 ++ G L+LPQ T+ATA + FHRF+ +RSL + + TC+ LA+KVEE R++RD IN C AQ KN F +++ + ++ QR + + + K++++ E+++L L FDL PY+ILL+ + LR + AWA +NDSL S C+T P Q A + L++A RFL Sbjct: 35 IVSVGMGLKLPQLTLATATVYFHRFYLRRSLKEF----HYYDMGATCILLASKVEETGRKLRDIINVCAQKAQ-----------------------------KNDKLFLEENSK---AVSSIQR-----IISSQEFQRWKDTILYNEEVLLETLCFDLAVEHPYKILLSLVKELRGSKKLAQTAWAFINDSLRS-ILCITYPPQVVAASALYVASRFL 210
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_003294609.1 (hypothetical protein DICPUDRAFT_10863 [Dictyostelium purpureum] >EGC28862.1 hypothetical protein DICPUDRAFT_10863, partial [Dictyostelium purpureum]) HSP 1 Score: 95.5 bits (236), Expect = 3.500e-16 Identity = 69/215 (32.09%), Postives = 97/215 (45.12%), Query Frame = 0 Query: 33 DAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 D G RL++PQ TIATA+ FH+FF + L DH +V CLFLA KVEE PR++ D I Y A K K GE AP++ A P + ++ V+ E L+L + F+L PY+ LL Y ++++ +VAW +NDSL + CL P + A ++LA RFL Sbjct: 33 DVGIRLKMPQLTIATAISYFHKFFIRHHLKDH----DRFIVATACLFLAGKVEETPRKLDDVIKISYMA-------------------KNKKKGE----------------------APEKVAQ---PSQVEHNLLRNKVLQNEHLILTTIAFELVVEHPYKYLLEYMKTIQGSKNLCQVAWNFVNDSL-RTSLCLHYPPDLISYASVYLATRFL 198
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_637571.1 (hypothetical protein DDB_G0286617 [Dictyostelium discoideum AX4] >EAL64064.1 hypothetical protein DDB_G0286617 [Dictyostelium discoideum AX4]) HSP 1 Score: 93.6 bits (231), Expect = 1.300e-15 Identity = 67/219 (30.59%), Postives = 95/219 (43.38%), Query Frame = 0 Query: 33 DAGERLRLPQETIATAVIIFHRFFAKRSLSDH----LAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 D G +L++PQ TIATA+ FHRFF + L DH VV CLFLA KVEE PR++ D I Y + + K G++ V QQ+ +K ++ E L+L + F+L PY+ LL Y +S++ +VAW +NDSL + CL P + A ++LA RFL Sbjct: 42 DVGIKLKMPQLTIATAISYFHRFFIRHQLKDHDRFVCINIDSPVVATACLFLAGKVEETPRKLDDVIKVSYMIKNK------------------KKDGDKMVA-----ISQQEHN-----------------------NLKNKILQNEHLILTTIAFELAVEHPYKYLLEYMKSIQGSKNLCQVAWNFVNDSL-RTSLCLHYPPDLISYASIYLATRFL 213
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_013911138.1 (PREDICTED: cyclin-L1 isoform X1 [Thamnophis sirtalis]) HSP 1 Score: 93.2 bits (230), Expect = 1.700e-15 Identity = 72/232 (31.03%), Postives = 109/232 (46.98%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 SE++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R+++I RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +ND+L + F +P +A A A ++LA R L Sbjct: 75 SETDLRILGC-ELIQAAGILLRLPQVAMATGQVLFHRFFYSKS----FVKHSFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRIKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDTLRTNIFVRFQP-EAIACACIYLAARAL 254
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_015265041.1 (PREDICTED: cyclin-L1 isoform X1 [Gekko japonicus]) HSP 1 Score: 92.0 bits (227), Expect = 3.800e-15 Identity = 70/232 (30.17%), Postives = 108/232 (46.55%), Query Frame = 0 Query: 18 SESNLLLHNCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLMTCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRA--RPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAVLHLAQRFL 248 +E++L + C ++ AG LRLPQ +AT ++FHRFF +S K ++V M C+ LA+K+EE PRRIRD IN V+ R++++ RT + L LD+ Y K V+ E+ VL+ LGF + P++I++ Y + L V+ AW +NDSL + F +P + A A ++LA R L Sbjct: 69 AETDLRILGC-ELIQSAGIILRLPQVAMATGQVLFHRFFYSKS----FVKHSFEIVAMACINLASKIEEAPRRIRDVIN-VFHHLRQLRVKRT---------------------------------------------PSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQP-ETIACACIYLAARAL 248
BLAST of NO02G05390 vs. NCBI_GenBank
Match: XP_004340251.1 (cyclin, Nterminal domain containing protein [Acanthamoeba castellanii str. Neff] >ELR18231.1 cyclin, Nterminal domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 91.7 bits (226), Expect = 5.000e-15 Identity = 73/250 (29.20%), Postives = 108/250 (43.20%), Query Frame = 0 Query: 4 AVASEAAGTTGTRASESNLLLH--NCVRVLLDAGERLRLPQETIATAVIIFHRFFAKRSLSDHLAKQRMDVVLM--TCLFLAAKVEEQPRRIRDAINCVYFAQRRMQILRTAFTADVAGGNKGDKGGEREVGKNSGDFRQQDERRHGVATAPQREADAILPLDRGYWEMKESVVDMEQLVLRVLGFDLDTYRPYRILLNYARSLRARPVTVEVAWALLNDSLFSPAFCLTRPSQAQAVAV--LHLAQRFL 248 AV E T ++++++L C+ + AG LRLP T TA FHRF+ L ++D+ LM +CL+LA K EE R+ RD IN YF + Q +L + + YW++++ VV EQ++LR L FDL P++ LLNY SL +V+W L ND ++P C+ R + Q +A L+LAQ L Sbjct: 62 AVTPENVHKTQMIDADTDMILRYFGCLLMRKAAG-LLRLPARTACTAQYYFHRFYDLHPL------HKLDIALMAQSCLYLACKAEETLRKARDVINSCYFLLQPQQ--------------------------------------------------PMLKIGKKYWDLRDEVVAAEQILLRTLDFDLTFIHPHKFLLNYINSLNGSQALAQVSWNLTNDLYYTP-LCMQRNHRPQVLACSSLYLAQFIL 253 The following BLAST results are available for this feature:
BLAST of NO02G05390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05390 ID=NO02G05390|Name=NO02G05390|organism=Nannochloropsis oceanica|type=gene|length=1435bpback to top protein sequence of NO02G05390.1 >NO02G05390.1-protein ID=NO02G05390.1-protein|Name=NO02G05390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=350bpback to top Synonyms
Publications
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