NO02G05170, NO02G05170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05170 vs. NCBI_GenBank
Match: POM68939.1 (FAD synthetase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 199.5 bits (506), Expect = 2.800e-47 Identity = 109/271 (40.22%), Postives = 153/271 (56.46%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALR---------------------RVTT--------------------KEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 + +D A++++LQ ALD++ S + +F LE + +FNGGKD+ VV +L+R +A R VT+ KE+L RV V+YF + +FPEV F EE + F+ + VY CS+ EG++D++E+ +K +++GVR GDPY+ + EH PSSPGWP FLRVNPIL+W Y VW FLR L YCSLYD GYTSLG+I T++NP L ++G Y PA+EL D + ER R Sbjct: 105 AGADPAMQKRLQKALDVMRSAIDIFGLEGVCFSFNGGKDSTVVLHLLRIVVAKRVLEETQQAHVKAQQEADDGPKTVTSPRNSFVSAELLQEDELESRVKEQLQRVPVMYF-DSYDQFPEVREFTEECTKKFELSCHVYK--CSFVEGVKDILEKLKIKGIYMGVRGGDPYTEDMEHFSPSSPGWPPFLRVNPILQWTYADVWSFLRDCQLEYCSLYDHGYTSLGNIFDTVQNPELWRKG-------EDGKEGYYLPAYELKDGSSERCGR 365
BLAST of NO02G05170 vs. NCBI_GenBank
Match: OWZ15256.1 (FAD synthetase [Phytophthora megakarya]) HSP 1 Score: 198.0 bits (502), Expect = 8.300e-47 Identity = 105/271 (38.75%), Postives = 150/271 (55.35%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALR-----------------------------------------RVTTKEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 + +D A++++LQ ALD++ S + +F LE + +FNGGKD+ VV +L+R +A R K++L RV V+YF + +FPEV F EE + ++ + VY CS+ EG++D++E+ +K +++GVR GDPY+ E EH PSSPGWP FLRVNP+L+W Y VW FLR L YCSLYD GYTSLG+I T++NP L ++G Y PA++L D T ER R Sbjct: 19 AGADAAMQKRLQKALDVMRSAIDIFGLEGVCFSFNGGKDSTVVLHLLRIVVAKRVLEEAQAAHLRAQVGAEEGPKTVTSPRNSFVSAELLQEEELEARVKKQLQRVPVMYF-DSYDQFPEVREFTEECTKKYELSCHVYK--CSFVEGVKDILEKLKIKGIYMGVRGGDPYTEEMEHFSPSSPGWPPFLRVNPVLQWTYADVWSFLRDCQLEYCSLYDHGYTSLGNIFDTVQNPELWRKG-------EDGKEGYYLPAYKLKDGTSERCGR 279
BLAST of NO02G05170 vs. NCBI_GenBank
Match: XP_008897008.1 (hypothetical protein PPTG_05248 [Phytophthora parasitica INRA-310] >ETI34348.1 hypothetical protein F443_19137 [Phytophthora parasitica P1569] >ETK74693.1 hypothetical protein L915_18560 [Phytophthora parasitica] >ETL28113.1 hypothetical protein L916_18461 [Phytophthora parasitica] >ETL81350.1 hypothetical protein L917_18289 [Phytophthora parasitica] >ETM34562.1 hypothetical protein L914_18375 [Phytophthora parasitica] >ETN17446.1 hypothetical protein PPTG_05248 [Phytophthora parasitica INRA-310] >ETO63126.1 hypothetical protein F444_19093 [Phytophthora parasitica P1976] >ETP04253.1 hypothetical protein F441_18949 [Phytophthora parasitica CJ01A1] >ETP32365.1 hypothetical protein F442_18913 [Phytophthora parasitica P10297] >KUF82417.1 FAD synthase [Phytophthora nicotianae]) HSP 1 Score: 196.1 bits (497), Expect = 3.100e-46 Identity = 106/272 (38.97%), Postives = 148/272 (54.41%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALR------------------------------------------RVTTKEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 + +D A++++LQ ALD++ S + +F LE + +FNGGKD+ VV +L+R +A R K +L RV V+YF + +FPEV F EE + F + VY CS+ EG++D++++ +K +++GVR GDPY+ + EH PSSPGWP FLRVNPILKW Y VW FLR L YCSLYD GYTSLG+I T++NP L ++G Y PA+EL D + ER R Sbjct: 19 AGADVAMQKRLQKALDVVRSAIDIFGLEGVCFSFNGGKDSTVVLHLLRIVVAKRVLEEAQLAHLKAEQEALDGPKTTVTSPRNSFVSADILQEEELEARVKAQLQRVPVMYF-DSYDQFPEVREFTEECTKKFALSCHVYK--CSFVEGVKDILDKLKIKGIYMGVRGGDPYTEDMEHFSPSSPGWPPFLRVNPILKWTYDDVWSFLRDCQLEYCSLYDHGYTSLGNIFDTVQNPELWRKG-------EDGKEGYYLPAYELKDGSSERCGR 280
BLAST of NO02G05170 vs. NCBI_GenBank
Match: XP_009517847.1 (hypothetical protein PHYSODRAFT_477086 [Phytophthora sojae] >EGZ30572.1 hypothetical protein PHYSODRAFT_477086 [Phytophthora sojae]) HSP 1 Score: 195.3 bits (495), Expect = 5.400e-46 Identity = 107/272 (39.34%), Postives = 148/272 (54.41%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALRRVTTKE------------------------------------------ELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 + +D A++++LQ ALD++ S + +F LE + +FNGGKD+ VV +L+R +A R + E +L RV V+YF H +FPEV F E + F + VY CS+ EG++D++E+ +K V++GVR GDPY+ + EH PSSPGWP FLRVNPILKW Y VW FLR L YCSLYD GYTSLG+I T++NP L ++G Y PA++L D + ER R Sbjct: 19 AGADAAMQKRLQQALDVMRSAIDIFGLEGVCFSFNGGKDSTVVLHLLRIVVAKRVLEEAEQEHARAQHEAEDDHKTTVTSPRNSFVSVDLLQEDELEARVQAQLQRVPVMYF-DSHDQFPEVRDFTELCTKKFALSCHVYK--CSFVEGVKDILEKLKIKGVYMGVRGGDPYTEDMEHFSPSSPGWPPFLRVNPILKWTYADVWSFLRDCQLEYCSLYDHGYTSLGNIYDTVQNPELWRKG-------EDGKEGYYLPAYDLKDGSSERCGR 280
BLAST of NO02G05170 vs. NCBI_GenBank
Match: XP_024582373.1 (phosphoadenosine phosphosulfate reductase family protein isoform 1 [Plasmopara halstedii] >CEG46004.1 phosphoadenosine phosphosulfate reductase family protein isoform 1 [Plasmopara halstedii]) HSP 1 Score: 193.4 bits (490), Expect = 2.000e-45 Identity = 100/268 (37.31%), Postives = 148/268 (55.22%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALR--------------------------------------RVTTKEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 + +D A++++LQ ALD+I S + +F LE + +FNGGKD+ V+ +L+R +A R +L RV V+YF + +F EV F E+ + + + VY CS+ EG++D++++ +K +++GVR GDP++ + EH PSSPGWP FLRVNPILKW Y VW+FLR +L YCSLYD GYTSLG++ T++NP L ++G Y PAH+L D + ER R Sbjct: 18 AGADAAMKRRLQKALDVIRSAIDIFGLEGVCFSFNGGKDSTVILHLLRIVIAKRVLEEVQLERIHEAVDCPKTITSPRNSFLSADLMDEDELEARVMAQLQRVPVMYF-DSYDQFQEVREFTEKCTKQYGLSCHVYK--CSFVEGVKDILDKLQIKGIYMGVRGGDPHTEDMEHFSPSSPGWPAFLRVNPILKWTYADVWKFLRNCDLDYCSLYDHGYTSLGNVFDTVQNPELWRKG-------EDAKEGYYLPAHDLKDGSSERCGR 275
BLAST of NO02G05170 vs. NCBI_GenBank
Match: XP_002907427.1 (FAD synthetase, putative [Phytophthora infestans T30-4] >EEY63991.1 FAD synthetase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 192.2 bits (487), Expect = 4.500e-45 Identity = 106/272 (38.97%), Postives = 146/272 (53.68%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALR------------------------------------------RVTTKEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 + +D A++++LQ ALD++ S + +F LE + +FNGGKD+ VV +L+R +A R K +L RV V+YF + +FPEV F EE F + VY CS+ EG++D++++ +K +++GVR GDPY+ + EH PSSPGWP FLRVNPILKW Y VW FLR L YCSLYD GYTSLG+I T++NP L + G Y PA+EL D + ER R Sbjct: 19 AGADAAMQKRLQKALDVMRSAIDIFGLEGVCFSFNGGKDSTVVLHLLRIVVAKRVLEEAQLAHLKAEQEAENGPKTTVTSPRNSFVSADLLQEEELEARVKTQLQRVPVMYF-DSYDQFPEVREFTEECNTKFALSCHVYK--CSFVEGVKDILDKLQVKGIYMGVRGGDPYTEDMEHFSPSSPGWPPFLRVNPILKWTYDDVWSFLRDCQLEYCSLYDHGYTSLGNIFDTVQNPELWRTG-------EDGKEGYYLPAYELKDGSSERCGR 280
BLAST of NO02G05170 vs. NCBI_GenBank
Match: KUF95676.1 (hypothetical protein AM588_10009346 [Phytophthora nicotianae]) HSP 1 Score: 189.9 bits (481), Expect = 2.300e-44 Identity = 101/232 (43.53%), Postives = 143/232 (61.64%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGK--DACVVFYLVRAALALRRVTTKEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 + +D A++++LQ ALD++ S + +F LE + +FNG K + V +++ RV K +L RV V+YF + +FPEV F EE + F + VY CS+ EG++D++++ +K +++GVR GDPY+ + EH PSSPGWP FLRVNPILKW Y VW FLR L YCSLYD GYTSLG+I T++NP L ++G Y PA+EL D + ER R Sbjct: 19 AGADVAMQKRLQKALDVVRSAIDIFGLEGVCFSFNGEKTRPSFVSADILQEEELEARV--KAQLQRVPVMYF-DSYDQFPEVREFTEECTKKFALSCHVYK--CSFVEGVKDILDKLKIKGIYMGVRGGDPYTEDMEHFSPSSPGWPPFLRVNPILKWTYDDVWSFLRDCQLEYCSLYDHGYTSLGNIFDTVQNPELWRKG-------EDGKEGYYLPAYELKDGSSERCGR 238
BLAST of NO02G05170 vs. NCBI_GenBank
Match: POM58340.1 (FAD synthetase, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 181.0 bits (458), Expect = 1.000e-41 Identity = 93/227 (40.97%), Postives = 130/227 (57.27%), Query Frame = 0 Query: 19 SASDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALR-----------------------------------------RVTTKEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDI 205 + +D A++++LQ ALD++ S + +F LE + +FNGGKD+ VV +L+R +A R KE+L RV V+YF + +FPEV F EE + F+ + VY CS+ EG++D++E+ +K +++GVR GDPY+ + EH PSSPGWP FLRVNPIL+W Y VW FLR L YCSLYD GYTSLG+I Sbjct: 105 AGADPAMQKRLQKALDVMRSAIDIFGLEGVCFSFNGGKDSTVVLHLLRIVVAKRVLEETQQAHVKAQQEADDGPKTVTSPRNSFISAELLQEDELEARVKEQLQRVPVMYF-DSYDQFPEVREFTEECTKKFELSCHVYK--CSFVEGVKDILEKLKIKGIYMGVRGGDPYTEDMEHFSPSSPGWPPFLRVNPILQWTYADVWSFLRDCQLEYCSLYDHGYTSLGNI 328
BLAST of NO02G05170 vs. NCBI_GenBank
Match: EWM30110.1 (fad synthetase, partial [Nannochloropsis gaditana]) HSP 1 Score: 177.2 bits (448), Expect = 1.500e-40 Identity = 92/151 (60.93%), Postives = 115/151 (76.16%), Query Frame = 0 Query: 1 MDMLLTFLRQDADTSKGESAS--DKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALRRVTTKEELARVKVLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYS 150 MD L F+ Q KG +A+ ++AL+ Q+Q ALDLI +++TLFPLE LALTFNGGKDACVVF+LVR AL LR V E R+KVLYF+P+HG+FPEV SFM ++ + TYT YP G S+K+GMRDLVE++GLKAVFLGVR GDP+S Sbjct: 1 MDSLQAFVSQPL---KGSAANPHNEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDPHS 148
BLAST of NO02G05170 vs. NCBI_GenBank
Match: XP_011400676.1 (FAD synthase [Auxenochlorella protothecoides] >KFM27689.1 FAD synthase [Auxenochlorella protothecoides]) HSP 1 Score: 172.9 bits (437), Expect = 2.900e-39 Identity = 90/235 (38.30%), Postives = 130/235 (55.32%), Query Frame = 0 Query: 21 SDKALRQQLQDALDLISSLVTLFPLEHLALTFNGGKDACVVFYLVRAALALRRVTTKEELARVK-------VLYFAPKHGEFPEVTSFMEEVVRTFDFTYTVYPPGCSYKEGMRDLVEREGLKAVFLGVRSGDPYSLESEHLQPSSPGWPVFLRVNPILKWDYGQVWRFLRRFNLPYCSLYDEGYTSLGDIRTTIRNPALLKEGGXXXXXXXXXXXXRYRPAHELVDWTLERANR 249 +D ++ + + A+ ++ + L+ L LA +FNGGKD+ V+ +++RAA+A+ + A+ K V +F +F EV +F ++ G +++G+ L+E +KA+ LG R GDP +++ E PSS GWP F+RVNP+L W Y VW FLR LPYCSLYD+GYTSLG + T RN ALLKE G Y PA+ L D LERA R Sbjct: 12 TDDRVKAKFESAISVVERAIALYGLPSLAFSFNGGKDSTVLLHIIRAAVAMHEQASPSGAAQAKVGGLSDMVTFFFDNPADFREVVAFTYATGAEYNLQLKSLHGG--FRQGLEALLESTSVKAILLGTRKGDPNAVDQETFCPSSAGWPPFMRVNPVLHWTYHDVWTFLREAGLPYCSLYDQGYTSLGAVSNTHRNSALLKEDG------------SYAPAYMLPDTRLERAGR 232 The following BLAST results are available for this feature:
BLAST of NO02G05170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05170 ID=NO02G05170|Name=NO02G05170|organism=Nannochloropsis oceanica|type=gene|length=2770bpback to top protein sequence of NO02G05170.1 >NO02G05170.1-protein ID=NO02G05170.1-protein|Name=NO02G05170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=586bpback to top Synonyms
Publications
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