NO02G05120, NO02G05120 (gene) Nannochloropsis oceanica

Overview
NameNO02G05120
Unique NameNO02G05120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3576
Alignment locationchr2:1368435..1372010 +

Link to JBrowse

Properties
Property NameValue
DescriptionTpr-repeat protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1368435..1372010 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR019734TPR_repeat
Homology
BLAST of NO02G05120 vs. NCBI_GenBank
Match: EWM30109.1 (tpr-repeat protein [Nannochloropsis gaditana])

HSP 1 Score: 524.6 bits (1350), Expect = 2.800e-145
Identity = 277/382 (72.51%), Postives = 309/382 (80.89%), Query Frame = 0
Query:   47 VTSLPQPSICFAPRACAGASSRGRTPLPTATYAATHASTSSSTWHPLHPQLTSSPLSFLLSTSLHKAAFKISLLFLGGCSGAFGPLLTSPLQASAAEPSPAQIQQVQRAFQAFNDRDLRLAESLFDKSVAVWEKLERPRDEMAALIKARGNVKVDLKKFDAAIVDFDRVLTIMSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFLASRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDLDFVQRIRRWPPTLVTKLGAFLGKSKVVAEGGSSVLR 429
            VT+LP  S           SSR  TP   +   +       +   P + +L     + L + ++H+A  KIS+L LG  S    P L SPL A AA+PS AQIQQVQRAFQAFNDRDLR AE+LFD+SV  WE+LERPRDEMAAL+KARGNVKVDLKKF+AAI DFDRVL+IMSVDGTKTDGSGEAAYSEYPD+FVQRGLA EGLS+W+AAV+DYS+AI LWGGGRGEGINPFVLTFRGN LTRLG+YKDALQDFEASADLFLASRDEEDALLARANAALTYYELGYEE+ +KLM DV+RRQPGF D+HVALAAHAWGEG LG AEKEWRFACE T+TGCA+YRDLDFVQRIRRWPP+LV KL  FL KSKVVA GGSSVLR
Sbjct:   59 VTTLPSES-----------SSRVITPKAPSALLSCAQQDVQTKKRPFYSRL--EVFNALSTGNVHQAFVKISILLLG--SSFADPFLLSPLPAMAADPSRAQIQQVQRAFQAFNDRDLRNAEALFDQSVQAWEQLERPRDEMAALVKARGNVKVDLKKFEAAIEDFDRVLSIMSVDGTKTDGSGEAAYSEYPDVFVQRGLAWEGLSKWEAAVQDYSRAIQLWGGGRGEGINPFVLTFRGNALTRLGRYKDALQDFEASADLFLASRDEEDALLARANAALTYYELGYEETGVKLMQDVLRRQPGFVDVHVALAAHAWGEGNLGRAEKEWRFACEQTTTGCASYRDLDFVQRIRRWPPSLVKKLEGFLAKSKVVAGGGSSVLR 425          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: CEL93194.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 305.4 bits (781), Expect = 2.700e-79
Identity = 154/297 (51.85%), Postives = 199/297 (67.00%), Query Frame = 0
Query:  139 ASAAEPSPAQIQQVQRAFQAFNDRDLRLAESLFDKSVAVWEKLER-----PRDEMAALIKARGNVKVDLKKFDAAIVDFDRVLTIMSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFLASRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDLDFVQRIRRWPPTLVTKLGAFL----GKSKVVAEGGSSV 427
            AS+ EPS   IQ VQ AF+ F+ +D   A+  F +++  WE L R      RDE+A L K RGNV+VD K+F   + D++R + +M  DG   +  G A Y EYPD FVQRGL  EGL++W AAV+DYS+AISLWGGGRGEGINPFVL FR N L+RLG Y DAL D++A+ DLFL+ RD+  A  ARAN AL  YE G  + A+K+M  ++RRQP +TDMHVALAAHA+ E  L  A KEW+FAC    +GC  Y  LD+V  IRRWPP+LV++L +F+    G   +  +GG  +
Sbjct:   94 ASSLEPSSKDIQTVQEAFKYFDAKDFDRADRFFSRAIDKWESLYRGGRKGGRDELATLYKVRGNVRVDSKRFAEGLEDYNRAIDLMKTDG--ENDQGIARYQEYPDAFVQRGLTYEGLADWDAAVKDYSKAISLWGGGRGEGINPFVLVFRANALSRLGNYDDALVDYKAADDLFLSLRDDARATDARANFALALYETGRRDDAVKVMRQIVRRQPAYTDMHVALAAHAYSENDLPGALKEWQFACTRIESGCRRYTQLDWVSEIRRWPPSLVSELRSFINDVGGVEDIARKGGKII 388          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: XP_005838019.1 (hypothetical protein GUITHDRAFT_66103, partial [Guillardia theta CCMP2712] >EKX51039.1 hypothetical protein GUITHDRAFT_66103, partial [Guillardia theta CCMP2712])

HSP 1 Score: 203.4 bits (516), Expect = 1.400e-48
Identity = 102/195 (52.31%), Postives = 126/195 (64.62%), Query Frame = 0
Query:  229 SGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFLA-SRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQ-PGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAY------RDLDFVQRIRRWPPTLVTKLGAFLGK 416
            +G+A Y EYPD FVQRGL  EGL  W+ A++DYS+AI LWGGGR +G+NP+VLTFR N L +LGKY +AL D+EAS  LF+A  RDE  AL  RAN AL  Y+       +   + +   Q  G+TDMHVALAA AW  G    AE EW FAC    TGC+ Y      RDLD++  +RRWPP +V  +  FLGK
Sbjct:    4 NGKAIYMEYPDTFVQRGLCSEGLGNWEDAIQDYSRAIQLWGGGREQGVNPYVLTFRANALAKLGKYNEALVDYEASDRLFVAVLRDEARALDVRANYALALYQADDLRLTMFTADPLHHLQLSGYTDMHVALAAIAWSAGDRETAESEWEFACNKIQTGCSLYRQSLISRDLDWLSTVRRWPPAMVANMALFLGK 198          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: OLP84463.1 (hypothetical protein AK812_SmicGene34660 [Symbiodinium microadriaticum])

HSP 1 Score: 194.1 bits (492), Expect = 8.700e-46
Identity = 110/316 (34.81%), Postives = 161/316 (50.95%), Query Frame = 0
Query:  120 LFLGGCSGAFGPLLTSPLQASAAEPSPAQIQQVQRAFQAFNDRDLRLAESLFDKSVAVWEKLERPRDEMAALIKARGNVKVDLK---------KFDAAIVDFDRVLTIMSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLS-------EWQAAVEDYSQAISLW----GGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFLASRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDLDFVQRIRRWPPTLVTKLGAFLGK 416
            L   G S     LL     A AA+P     ++           +L  AE  F   +  +++    R +   L  AR   ++ +          K +AA+ D+  V+ +M  DG  T         +YP +FV+R LARE ++       +W+AAV+DY++AI  W        G G+NP VL +RGN   +LG++KDAL D+  + ++F+  ++   A L+R N AL  + +     A+ +M DV+RR P   D H+ALAA  W EG    AE EWR AC+NT  GC  Y+DL +V+ IRRWPP LV  LG FL +
Sbjct:  500 LAAAGPSAEDAALLGGAFAAMAADPRRPGARE-----------ELEAAEEAFTTVIQRFDEAGASRQDRGELRMARAQARIAINDCTGGQLPAKAEAAVQDYSDVVQLMEEDGAAT------GTFDYPSVFVRRALAREEIAYGRKDKKQWEAAVQDYTKAIDTWRSRPPSETGLGVNPLVLNYRGNAFGQLGRFKDALADYREATEIFIKDQEYTQAALSRCNEALALFGISEPIEAISIMEDVVRRDPSIADAHIALAASYWSEGDYSRAEDEWRVACQNTDVGCRQYKDLSWVENIRRWPPQLVGDLGRFLNR 798          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: GAQ88058.1 (hypothetical protein KFL_003970050 [Klebsormidium nitens])

HSP 1 Score: 171.0 bits (432), Expect = 7.900e-39
Identity = 114/285 (40.00%), Postives = 156/285 (54.74%), Query Frame = 0
Query:  144 PSPAQIQQVQRAFQAF--------NDRDLRLAE--SLFDKSVAVWEKLERPRDEMAALIKARGNVKVDLKKFDAAIVDFDRVLTIMSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGIN-PFVLTFRGNVLTRLGKYKDALQDFEASADLFLASRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTST-----GCAAYRDLDFVQRIRRWPPTLVTKLGAF 413
            PSP  ++ + +A +A+         +R   LAE  +LFDK VA    LE  R E     +ARG ++VD KKF+ A+ DF+ VL        + + S    YS        R LA EGLS W  AV+DY+ A+ L  G +  G + P+VL  RGN    LG++ +AL+D+E S   F   R  + A+ + ANAAL   +LG E+  LK +  V RR PG  DM  ALAA  W +G+   AE  W+FACEN +      GCA YRD D+++RIRRWPP +  K+  F
Sbjct:   42 PSPQALELLDQASEAWGRGLDPTSQNRWAALAEACTLFDKLVA----LEPERTEWR---EARGQLRVDSKKFNEALDDFNYVL--------EKNPSNFRGYS-------SRALAYEGLSYWDKAVDDYTTALRL--GKKATGFDEPYVLNSRGNAFASLGQWSEALRDYELSVKGFQEGRQLDGAIYSAANAALMQIQLGNEKEGLKELTTVARRAPGSIDMRAALAALYWSQGREREAESTWQFACENINAGQLYDGCAKYRDQDWLRRIRRWPPVMADKMQDF 302          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: XP_005646389.1 (TPR-like protein [Coccomyxa subellipsoidea C-169] >EIE21845.1 TPR-like protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 166.0 bits (419), Expect = 2.600e-37
Identity = 114/318 (35.85%), Postives = 166/318 (52.20%), Query Frame = 0
Query:  120 LFLGGCSGAFGPLLTSPLQASAAEPSPAQIQQVQRAF-QAFNDRDLRLAESLFDKSVAVWEKLERPRDEMAALIKARGNVKVDLKKFDAAIVDFDRVLTIMSVDGTKTDG---SGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFLAS---RDE--------EDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDLDFVQRIRRWPPTLVTKLGAF--LGKSKVVA 421
            L LG         L     A AA  +   +++++ A  +A+  RD R    L D+ VA      R  +  AA       V+VD K+F++A+ DF++ +         T G   S   +  E   L   R LA EGL++W+AA+ DY+ A+ L   G G+  +P+VL  RGNV   L ++K+A QD+  SA  F  +   RD         +DA++A +NAAL   +LG E +A+  M   +RR PG  D+  ALAA  W +G    AE EW FACE  S GC+ Y+D D++ RIRRWP ++V ++ +F  L  SK VA
Sbjct:    6 LILGSVLAVTSANLLRTADAQAAISAAPDLREIEEAAREAYAKRDFRTTLELVDELVAAQPSAARWHEMRAA-------VRVDGKQFESALTDFNQAI-------NATPGCCVSAADSLVERARLLAGRALAYEGLAQWEAALGDYNTALDLARQG-GQYPDPYVLNSRGNVQASLARWKEARQDYLKSAAGFQKAAGFRDSSGSSALRLDDAVVAASNAALALVQLGDEPAAILEMRKALRRAPGSADLRAALAALYWSQGNEAAAESEWNFACERISVGCSKYQDKDWLSRIRRWPSSMVDRMTSFLALASSKRVA 308          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: XP_005781052.1 (hypothetical protein EMIHUDRAFT_73062 [Emiliania huxleyi CCMP1516] >EOD28623.1 hypothetical protein EMIHUDRAFT_73062 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 158.3 bits (399), Expect = 5.300e-35
Identity = 84/203 (41.38%), Postives = 113/203 (55.67%), Query Frame = 0
Query:  219 MSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFL-ASRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDL---DFVQRIRRWPPTLVTKLGAFLGKSK 418
            M   G K++G G  AY EYPD FVQRGLA EGL +W+ A+ DY +A+SLWGG  G+G+NP+ LT+                             ++ E +  ARA  A+T Y L   + A+++   V+ R PG TD+HV LAA AW  G    A KEW FAC+  STGCA YRD+    ++  +RRWP  LV +   FL +S+
Sbjct:    1 MRPTGEKSNGLG--AYREYPDAFVQRGLANEGLRDWRGALSDYDKAVSLWGGA-GDGVNPYTLTYXXXXXXXXXXXXXXXXXXXXXXXXXXRVDKNVEQSSFARAGEAVTLYALDRRDEAVRVARQVVTRFPGLTDLHVLLAADAWDRGDREKAIKEWSFACDAISTGCAKYRDVKEGGWLVEVRRWPAPLVQRQRTFLEESQ 200          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: XP_005789820.1 (hypothetical protein EMIHUDRAFT_70534 [Emiliania huxleyi CCMP1516] >EOD37391.1 hypothetical protein EMIHUDRAFT_70534 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 158.3 bits (399), Expect = 5.300e-35
Identity = 84/203 (41.38%), Postives = 113/203 (55.67%), Query Frame = 0
Query:  219 MSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFL-ASRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDL---DFVQRIRRWPPTLVTKLGAFLGKSK 418
            M   G K++G G  AY EYPD FVQRGLA EGL +W+ A+ DY +A+SLWGG  G+G+NP+ LT+                             ++ E +  ARA  A+T Y L   + A+++   V+ R PG TD+HV LAA AW  G    A KEW FAC+  STGCA YRD+    ++  +RRWP  LV +   FL +S+
Sbjct:    1 MRPTGEKSNGLG--AYREYPDAFVQRGLANEGLRDWRGALSDYDKAVSLWGGA-GDGVNPYTLTYXXXXXXXXXXXXXXXXXXXXXXXXXXRVDKNVEQSSFARAGEAVTLYALDRRDEAVRVARQVVTRFPGLTDLHVLLAADAWDRGDREKAIKEWSFACDAISTGCAKYRDVKEGGWLVEVRRWPAPLVQRQRTFLEESQ 200          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: XP_013895007.1 (hypothetical protein MNEG_11974 [Monoraphidium neglectum] >KIY95987.1 hypothetical protein MNEG_11974 [Monoraphidium neglectum])

HSP 1 Score: 154.5 bits (389), Expect = 7.700e-34
Identity = 92/258 (35.66%), Postives = 141/258 (54.65%), Query Frame = 0
Query:  167 AESLFDKSVAVWEKLERPRDEMAALIKARGNVKVDLKKFDAAIVDFDRVLTIMSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFLASRDE-----------EDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDLDFVQRIRRWPPTLVTKLGAFL 414
            AE  F ++V + + +  P  +    ++ R  V VD K F+ A+ D+   L        +++ +G A  ++   L   R LA EGLS+W  A+ DY  A++L   G GE  +P+V+  RGN L  L ++++A +++ A+AD+F ASR             + A+ A +NAAL   E+G  E A   M  + RR PG  DM VALAA  W  G    AE++W++AC+  + GC  Y D D++ R+RRWPP++V  L  FL
Sbjct:  102 AERRFAEAVRLLDSIAEP--DNPRWLEMRAQVLVDGKDFEGAVRDYGAAL-------RRSEEAG-APLTDRARLLSGRALAYEGLSKWAEALADYDAAMALAAAG-GESPDPYVINARGNCLNSLRQWREAREEYLAAADVFQASRGYRGRNGNTTARLDGAIFAASNAALMLAEMGDAEGAEAEMRRIARRAPGSADMRVALAALLWQRGLDADAEEQWQYACDRITVGCRKYTDADWLSRVRRWPPSMVAALSDFL 348          
BLAST of NO02G05120 vs. NCBI_GenBank
Match: XP_002950978.1 (hypothetical protein VOLCADRAFT_91510 [Volvox carteri f. nagariensis] >EFJ47872.1 hypothetical protein VOLCADRAFT_91510 [Volvox carteri f. nagariensis])

HSP 1 Score: 152.9 bits (385), Expect = 2.200e-33
Identity = 94/261 (36.02%), Postives = 132/261 (50.57%), Query Frame = 0
Query:  164 LRLAESLFDKSVAVWEKLERPRDEMAALIKARGNVKVDLKKFDAAIVDFDRVLTIMSVDGTKTDGSGEAAYSEYPDLFVQRGLAREGLSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQDFEASADLFLASRD-----------EEDALLARANAALTYYELGYEESALKLMNDVIRRQPGFTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDLDFVQRIRRWPPTLVTKLGAFL 414
            L  AE  F  +V +  +      E A   + R    VD K F AA+ DF+  L ++      T             L   R LA EGLS W  A+ DY + + L     GE +NP+VL   GN L  LG++++A + + ASA +F  +R             + A+ A +NAAL   +LG  + A++ M  + RR PG  DM  ALAA  WG+G+   AE+ W FAC+  + GCA Y DLD++ RIRRWPP +V  +  FL
Sbjct:  114 LAYAERRFQDAVDLLTRCIAAEPESARWREMRAEALVDGKNFSAALEDFEAALGLVPGKDLVTRAR----------LLTGRALAYEGLSRWGDALADYRRGLDL-AAEAGESLNPYVLNSIGNCLNSLGRWEEAREQYLASAAVFQQARGFRGRNGATTPRLDGAIFASSNAALMRAQLGDTDGAVQEMVRIARRAPGSADMRAALAALYWGQGRRQEAEEMWEFACDVITVGCAKYTDLDWLGRIRRWPPVMVAAMSDFL 363          
The following BLAST results are available for this feature:
BLAST of NO02G05120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30109.12.800e-14572.51tpr-repeat protein [Nannochloropsis gaditana][more]
CEL93194.12.700e-7951.85unnamed protein product [Vitrella brassicaformis C... [more]
XP_005838019.11.400e-4852.31hypothetical protein GUITHDRAFT_66103, partial [Gu... [more]
OLP84463.18.700e-4634.81hypothetical protein AK812_SmicGene34660 [Symbiodi... [more]
GAQ88058.17.900e-3940.00hypothetical protein KFL_003970050 [Klebsormidium ... [more]
XP_005646389.12.600e-3735.85TPR-like protein [Coccomyxa subellipsoidea C-169] ... [more]
XP_005781052.15.300e-3541.38hypothetical protein EMIHUDRAFT_73062 [Emiliania h... [more]
XP_005789820.15.300e-3541.38hypothetical protein EMIHUDRAFT_70534 [Emiliania h... [more]
XP_013895007.17.700e-3435.66hypothetical protein MNEG_11974 [Monoraphidium neg... [more]
XP_002950978.12.200e-3336.02hypothetical protein VOLCADRAFT_91510 [Volvox cart... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL018nonsL018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR003ngnoR003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007257NSK007257Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05120.1NO02G05120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575329gene_1104Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100310g7gene545Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05120.1NO02G05120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05120 ID=NO02G05120|Name=NO02G05120|organism=Nannochloropsis oceanica|type=gene|length=3576bp
ACGAAGGGACTGGATAATTGGTTCTAATAGGACAAGGCGAGACAGTGCTG
GGTAATAGGGCCCACGCGCACACGGAAGAATAGAGGAAGGCAAGTTGCAT
AAGCCCTCAAATTAGTAAATGCCTTTTTTTGATTCGTGACGTAACTCTAC
CAGTCTCTACTGAGCTATGCCGTTATGCCCATTCATCCCTCCCGCTCCCT
CTTCCTCTTCTCCTGCTCCTCCTCTCTCGCTTTCACCATCCGTAGCCGCC
GCTGCTGCCGCGGTACCTTCTTCTTCCTCCTCTTCGACGTCGTCGAATTG
CCCGCCTGCCGCCGCGCCCAAATTGGGGCTAAAGGTCATGAGTCCCTCGA
GGTGAGACAGCACACGGGCCTATGAGATGGTTATTGGAAGTGTTAGAATG
AGAATCATTTGTAAGCCAGTTGAATGTCATCACGCAGTCGTAGCCTACAT
CATCTTTTGTTACACACACGTCAACAAATTGAGAGCTTCATCGACCGTCA
CTGACAAGCAACCATCCATCTCCTCCTACCTGTTCTTCCGACGCGCCCCC
CGCGGCAGCAAAGGCGCTCTGGTCAAAAATTAAATCATCGTCGCCCTCAT
TTTCTTCGGCCTCTGGAGGGTCAGGGTTCATTAAAGCTGCCTTGGAAAGC
GCCTCGAAGAGAGGACTCACTGAATGAAGGGGAGGAAATTGCAAGATGTG
AGTAAATATGCACGAGATGACGGATGCGGCGAGACCAGGATATGAATGCT
GCAGACACTATATGAAAGTCCATATATTTAATGGAACATCTCTTCGAAAA
CGGGAGGATAGGGTTGAATGGGTTCTGCAATTATCGCATACCATCTAACC
AGGGCACGCATGAGCAAACACTTACGACTCTCTGGGTCCTGCGGCACGAA
GTAGATCTCTTTGGCCTCGTCCTCGTCCTCATCTTCCCCACCTTCTGAGA
CCTGCAGTGGTGATAAAAAGGCGGGAAGGCATTCTGGATAAGGAAGGATA
TTATCGAGGTCTTCTCCTTGAGAAAGGTACCCATCTTCCCTTCCCGCTTC
GACCTCTCAGCCCGTCCATCCATCGCATACCTGGCAGTACAAACATGGCT
TCGGAAAAGATGAAGGATCTTTGGAAATAGCATGGAGGGTGATGCAAGGG
GCATCTACCTTGTAAACCTTGCCCTCGACCCCTTCCTCTTGCTGCTGCTG
CTTCCATAGAAGGCATTTTGACGTTACTTGCAACAGGCCCCGGCCTTCCG
GTGCCATGGCACTGCCCCCATACGACATTTCTACGTCGGCCAGCTCGAAC
AAGACTCGCTCGTCCTACGGGAGAGCGGTGGTATGAAGGAGTTGAGGCGT
GAGAGGGTTAGATATGATTCGCTACTCAGGGACTTGTACTGCTTACCTGC
TCCATGATTGAAGCCGCCATTCGTTGCGTCGGTGTTGAAAACTTGGTGCC
TGTGCATATGTGAGTGCAGTGGGCAGCATGAGGTTAAAGGGCCGAGGCGA
ATCACAAGAGTGTGCATCGTCCGCTTGGAGGGGAAGAAAGAAGAGGGGGG
AGAGGAGGTCAGGCCCATCGCACCCATCGCGAACCATTCAAGAAACACAA
CCATGCTTTGCGTCCTCGCATGACCCAAATGGTCAGTTAGCCGTTTACTA
ATAAAGCACACAAGCATGATTCGAAGAAACATAATACAACATCTCTGAGT
TTTGACAGTGGACAAAATGTAGCCCACACAAAGGGAAAGGAAGCGGGTGG
CGTGTCTAACATCCTTCAAGGCATTGCATTCCTGGGACGAACGAGGACCA
AATTGCGCCTACGTCTTCAGGGAAAAATTGCTACAGCGCATCCAATTTTG
TGACGAAAAAGTTGCAGATTTCTTATGGCACACCGTATGGAAAATGATGC
CAGACTCTGCTATGCTCAATGGGGTCGCGCGAGACACTCATCGGACGTTT
TGTTGCGTTCGTCGTTCGTGATTGGCCTGACGCAGGACATGACGCCTGTA
AAACACAATTCTTTCCAATCCGCTCCTAGTAATACAGCTACTCGCGCCTT
TATGGTGCCCACTATGAATAGCAGCACCAAGAAGCGGCAAAGATGGCAGC
TTCCATCGCGATTGATTCATCACTTCACCGCCTCTCCTCCCCTCTCTCTC
GTCTTCAACACAGTAAGATGCCATCACCGACACAGCCACGGCGGTACAAT
TTGTCCTGGACATGCCTAATACTAGGGTTAGTCACGTCCCTCCCCCAGCC
TTCGATCTGCTTTGCTCCGCGCGCGTGTGCGGGTGCTTCCTCCCGCGGCC
GGACGCCCCTTCCGACTGCGACCTATGCCGCCACGCACGCCTCTACCAGC
TCAAGTACCTGGCACCCGCTCCATCCCCAACTGACTTCCAGTCCCTTGTC
CTTTCTCTTGTCCACCTCACTTCATAAAGCTGCCTTTAAGATCAGCCTCC
TCTTTCTTGGTGGCTGCAGCGGCGCTTTTGGACCCCTCCTCACCTCCCCC
CTCCAGGCCTCGGCTGCCGAACCGTCCCCCGCGCAGATCCAGCAAGTTCA
ACGTGCCTTTCAAGCGTTCAATGACCGAGACTTACGCCTGGCCGAATCTT
TGTTCGATAAGTCGGTGGCTGTTTGGGAGAAATTGGAACGGCCCAGAGAC
GAGATGGCAGCGTTGATCAAAGCCCGTGGGAACGTTAAAGTGGACCTCAA
GAAATTTGATGCGGCCATAGTTGATTTTGACAGGGTTTTGACGATCATGA
GCGTGGACGGGACCAAGACGGACGGAAGTGGGGAAGCGGCTTATTCAGAG
TATCCAGATCTGTTCGTGCAGCGGGGCTTGGCGAGGgtacgtcaatgggg
gtaggagaggaagggaaacatgatggtcgagagagaaggatggatggcaa
ggatcgcatttcttcatgagactgtctatttccctacatttggagcgatc
attcaccccttctctcctccttcattctggcccatgctacgactgacagG
AGGGACTGAGCGAGTGGCAAGCCGCCGTTGAGGACTACAGCCAAGCCATC
TCTCTCTGGGGCGGGGGGCGAGGAGAGGGAATCAATCCCTTTGTGCTCAC
TTTTCGTGGGAATGTATTGACGAGGCTGGGGAAGTACAAAGATGCCTTGC
AGGACTTCGAGGCGTCTGCGGATTTATTTCTGGCGTCGAGAGATGAGGAG
GATGCGTTGCTGGCCCGGGCGAACGCGGCGTTGACGTACTATGAACTGGG
GTATGAGGAATCTGCATTAAAGTTAATGAATGACGTGATCAGGCGACAGC
CCGGCTTCACGGATATGCACGTGGCGTTGGCAGCCCATGCGTGGGGGGAG
GGGAAGCTTGGGTTGGCGGAAAAGGAATGGAGGTTTGCATGTGAGAACAC
GAGTACGGGGTGTGCGGCTTATAGAGATTTGGATTTTGTTCAACGGATAC
GGAGGTGGCCTCCTACGCTGGTGACGAAGCTCGGTGCGTTTTTGGGGAAG
AGCAAGGTGGTGGCGGAGGGGGGGAGTAGCGTATTGAGATGAAGGAGGGT
GAGGGAGGGGGGAGGGCGAGAAAGGG
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protein sequence of NO02G05120.1

>NO02G05120.1-protein ID=NO02G05120.1-protein|Name=NO02G05120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MAASIAIDSSLHRLSSPLSRLQHSKMPSPTQPRRYNLSWTCLILGLVTSL
PQPSICFAPRACAGASSRGRTPLPTATYAATHASTSSSTWHPLHPQLTSS
PLSFLLSTSLHKAAFKISLLFLGGCSGAFGPLLTSPLQASAAEPSPAQIQ
QVQRAFQAFNDRDLRLAESLFDKSVAVWEKLERPRDEMAALIKARGNVKV
DLKKFDAAIVDFDRVLTIMSVDGTKTDGSGEAAYSEYPDLFVQRGLAREG
LSEWQAAVEDYSQAISLWGGGRGEGINPFVLTFRGNVLTRLGKYKDALQD
FEASADLFLASRDEEDALLARANAALTYYELGYEESALKLMNDVIRRQPG
FTDMHVALAAHAWGEGKLGLAEKEWRFACENTSTGCAAYRDLDFVQRIRR
WPPTLVTKLGAFLGKSKVVAEGGSSVLR*
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Synonyms
Publications