NO02G05100, NO02G05100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05100 vs. NCBI_GenBank
Match: XP_005855812.1 (hypothetical protein NGA_2086400, partial [Nannochloropsis gaditana CCMP526] >EKU20548.1 hypothetical protein NGA_2086400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.8 bits (325), Expect = 4.300e-27 Identity = 63/91 (69.23%), Postives = 79/91 (86.81%), Query Frame = 0 Query: 1 MASLEDPEATRHHCHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDEK 92 MASL+DP+AT HHC I LH + +KAQL+++VLE+D+ELQP K+ K+FAV+G+AL+V LVSCD KVLRVAVSSFYDMLTVALKTL +FD + Sbjct: 3 MASLKDPKATLHHCRISLHLTSSSKAQLIQDVLEVDEELQPDKVCKSFAVEGSALNVHLVSCDLKVLRVAVSSFYDMLTVALKTLLQFDNE 93
BLAST of NO02G05100 vs. NCBI_GenBank
Match: EWM30171.1 (EKC/KEOPS complex, subunit Pcc1 [Nannochloropsis gaditana]) HSP 1 Score: 129.8 bits (325), Expect = 4.300e-27 Identity = 63/91 (69.23%), Postives = 79/91 (86.81%), Query Frame = 0 Query: 1 MASLEDPEATRHHCHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDEK 92 MASL+DP+AT HHC I LH + +KAQL+++VLE+D+ELQP K+ K+FAV+G+AL+V LVSCD KVLRVAVSSFYDMLTVALKTL +FD + Sbjct: 51 MASLKDPKATLHHCRISLHLTSSSKAQLIQDVLEVDEELQPDKVCKSFAVEGSALNVHLVSCDLKVLRVAVSSFYDMLTVALKTLLQFDNE 141
BLAST of NO02G05100 vs. NCBI_GenBank
Match: XP_009515900.1 (hypothetical protein PHYSODRAFT_469149, partial [Phytophthora sojae] >EGZ28625.1 hypothetical protein PHYSODRAFT_469149, partial [Phytophthora sojae]) HSP 1 Score: 70.5 bits (171), Expect = 3.100e-9 Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 16 IDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDE 91 I L FP AQ V LE+DDELQP KI +T V G L V + + ++LR AVSSFYDM +A +TL EF E Sbjct: 1 ISLTFPEEVDAQYVLQTLEVDDELQPDKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMGVLAARTLLEFKE 75
BLAST of NO02G05100 vs. NCBI_GenBank
Match: ETI43520.1 (hypothetical protein F443_11539 [Phytophthora parasitica P1569] >ETM43539.1 hypothetical protein L914_11061 [Phytophthora parasitica]) HSP 1 Score: 70.5 bits (171), Expect = 3.100e-9 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 14 CHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDE 91 C I+L FP AQ V LE+D+ELQP KI +T V G L V + + ++LR AVSSFYDM + + L EF E Sbjct: 10 CEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEFKE 86
BLAST of NO02G05100 vs. NCBI_GenBank
Match: ETK83659.1 (hypothetical protein L915_11231 [Phytophthora parasitica] >ETL37076.1 hypothetical protein L916_11128 [Phytophthora parasitica] >ETL90218.1 hypothetical protein L917_11032 [Phytophthora parasitica] >ETO72258.1 hypothetical protein F444_11610 [Phytophthora parasitica P1976] >ETP13409.1 hypothetical protein F441_11459 [Phytophthora parasitica CJ01A1] >ETP41477.1 hypothetical protein F442_11433 [Phytophthora parasitica P10297]) HSP 1 Score: 70.5 bits (171), Expect = 3.100e-9 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 14 CHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDE 91 C I+L FP AQ V LE+D+ELQP KI +T V G L V + + ++LR AVSSFYDM + + L EF E Sbjct: 10 CEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEFKE 86
BLAST of NO02G05100 vs. NCBI_GenBank
Match: XP_008916712.1 (hypothetical protein PPTG_19892 [Phytophthora parasitica INRA-310] >ETM97995.1 hypothetical protein PPTG_19892 [Phytophthora parasitica INRA-310]) HSP 1 Score: 70.5 bits (171), Expect = 3.100e-9 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 14 CHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDE 91 C I+L FP AQ V LE+D+ELQP KI +T V G L V + + ++LR AVSSFYDM + + L EF E Sbjct: 99 CEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEFKE 175
BLAST of NO02G05100 vs. NCBI_GenBank
Match: XP_013733852.1 (uncharacterized protein BNAC03G15280D [Brassica napus] >CDY38721.1 BnaC03g15280D [Brassica napus]) HSP 1 Score: 66.6 bits (161), Expect = 4.500e-8 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 14 CHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDE 91 CH+D++F T A + L +D ELQP K+R+ +V L V + + ++LR ++S+F D+LT+A KT+QEF E Sbjct: 11 CHLDVNFETEQHAFIAYTSLAVDKELQPGKVRRVMSVSNNKLSVHFEAIEARLLRASLSAFVDVLTLATKTIQEFRE 87
BLAST of NO02G05100 vs. NCBI_GenBank
Match: GAX99300.1 (Hypothetical protein PINS_007152 [Pythium insidiosum]) HSP 1 Score: 65.9 bits (159), Expect = 7.700e-8 Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 0 Query: 12 HHCHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDEK 92 + C I L FP AQ +++D+ELQP KI +T +V+G+ L V + + ++LR AVSSFYDM + +TL EF ++ Sbjct: 7 YECEIALSFPEAEDAQHAMMTIQVDEELQPEKIHRTLSVNGSDLIVHFEATEIRLLRAAVSSFYDMALLVSRTLLEFKDE 86
BLAST of NO02G05100 vs. NCBI_GenBank
Match: XP_009119843.1 (PREDICTED: uncharacterized protein LOC103844784 [Brassica rapa] >XP_013726810.1 uncharacterized protein BNAA10G06410D [Brassica napus] >CDY49451.1 BnaA10g06410D [Brassica napus]) HSP 1 Score: 65.5 bits (158), Expect = 1.000e-7 Identity = 32/90 (35.56%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 2 ASLEDPEATRHHCHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDEK 92 AS +A C +D++F + A +V L++D ELQP K+R+ +V L V + + + LR + S+F D+LT+A +T+QEF +K Sbjct: 7 ASAPSNQAWDFSCKLDVNFESEEHALIVYTTLDVDKELQPDKVRRVMSVSDNKLSVHFEALEARFLRASFSAFVDVLTLATRTIQEFGQK 96
BLAST of NO02G05100 vs. NCBI_GenBank
Match: XP_018454678.1 (PREDICTED: uncharacterized protein LOC108825825 [Raphanus sativus]) HSP 1 Score: 65.5 bits (158), Expect = 1.000e-7 Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = 0 Query: 2 ASLEDPEATRHHCHIDLHFPTPAKAQLVKNVLEIDDELQPTKIRKTFAVDGTALDVLLVSCDPKVLRVAVSSFYDMLTVALKTLQEFDEK 92 A++ +A C +D++F + A +V L++D ELQP K+R+ +V L V + + + LR + S+F D+LT+A +T+QEF +K Sbjct: 3 ATVPSNQAWDFSCKLDVNFESEEHALIVYTTLDVDKELQPDKVRRVMSVSNNKLSVHFEALEARFLRASFSAFVDVLTLATRTIQEFGQK 92 The following BLAST results are available for this feature:
BLAST of NO02G05100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05100 ID=NO02G05100|Name=NO02G05100|organism=Nannochloropsis oceanica|type=gene|length=352bpback to top protein sequence of NO02G05100.1 >NO02G05100.1-protein ID=NO02G05100.1-protein|Name=NO02G05100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=92bpback to top Synonyms
Publications
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