NO02G05040, NO02G05040 (gene) Nannochloropsis oceanica

Overview
NameNO02G05040
Unique NameNO02G05040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2782
Alignment locationchr2:1354105..1356886 -

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Properties
Property NameValue
DescriptionTranslational activator
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1354105..1356886 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0043022ribosome binding
GO:0019901protein kinase binding
GO:0019887protein kinase regulator activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0033554cellular response to stress
GO:0033674positive regulation of kinase activity
GO:0006417regulation of translation
GO:0065009regulation of molecular function
GO:0019538protein metabolic process
GO:0009987cellular process
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR033173Gcn1
Homology
BLAST of NO02G05040 vs. NCBI_GenBank
Match: EWM30172.1 (translational activator [Nannochloropsis gaditana])

HSP 1 Score: 793.9 bits (2049), Expect = 5.000e-226
Identity = 450/793 (56.75%), Postives = 569/793 (71.75%), Query Frame = 0
Query:   69 FSRSATRSLCLLLVELALSATCNDFKSIGRAVREVLRSGLEDAPSHWPLLPDVMATVLTGAQARCTFAEARVASLRLWAQLLEHQLRDASKRKRWKQEGXXXXXXXXXXXXXXXXXXXXXXXXXTVESLLKSEVVAKALTAQAALVDGLMSSLSSSPATSDRPSLRDAGIREITRLLENFPSLLPEVYKRRLVSPSFSSSSLWLLATLVDFYRTRLPLSTYAAAKKDFFEVYLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLPLDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARGGRRLPRSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVE---GSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEMEGL-SGSSGEYAKLLMEKESWLFAPTQVDACVRASHLAPVALSMVRLLVAATRTLGVSAVIGQMANFEEEESLGVRNAKPATLTLLEMLLHPNQEVRIESKNAVALMLQEDAALTRMALVKGLWVKVDLCVARKQEAAGMWAAGAIGDDLDSSVSKAK---AEQRGSPCPQRFADALASLFPTVAQEGEGAAAAADAAAEGEV-DPGTLACLPMAMVLAHHPVVSESTRQAAGLWHRLMRGHGMGGPGGVEGGLDDISVDISDEVIQAIMAPGGGR 854
            FSR  TRSLCLLL ELAL +TCND+K+IG AVREVL +GLE A + W  LP+VMATVLT AQ+RCTF E R+A+LRLW QLLEH+LRDASKRKRW +EG                         TV+SLL SEVV KA+TAQ+ L++G MS     P       +   G+ E  RLL ++P LLP+VYK R  +P+FSSSSLWLL+ LVDFYRT+LP    A AK+DF EVYLREAINSK++PSPS LASF  LL+TVT ED+ +PLGPA+E+ALKKSPAGVL AV +LA QL LDLSPYVD+LFLP ALRM+KSMEEEPR +A+ L+ TLA+KVGD+A F+R V  V++VL GK GG LAQWFQRHACV ALR+LARG RRLPR+A+APAT AALEGLV A+G+E+HEGTRAEI   LG+WLG V EEG   +P V + L KG+E   G + K+KE LL LLLA++++L ++P+L+  ++  L E L +VV++GAKKA+QVGN+E +VALHCLVEM+GL  G  G+Y K+L E++SWLFAP+Q++A  RAS  AP A+S+ RLL+ ATR++GV AVIG   + + +ESLGV+N   A + L+E+LLH + +VR E++  +   L ED   TRM L+K +WVKV    +R + A+     G+   +  SS    K    +QR  PCPQRFA+AL  LFP  A   E     A    E EV D G+LA LPMA +LA+HP+VS+S+RQA+ LW RLMRG G+ G   VE   DDIS+D+SDEVIQA+++ GG R
Sbjct:    4 FSRPVTRSLCLLLAELALGSTCNDYKTIGHAVREVLHAGLERASTRWQWLPEVMATVLTNAQSRCTFTETRLAALRLWGQLLEHELRDASKRKRWIKEG-KRRRQALEDRKLTGSDASAPPPYPTVDSLLASEVVIKAITAQSILLEGFMSPDRVPP----NLGMSKGGVTEFARLLRHYPRLLPKVYKTRATNPAFSSSSLWLLSALVDFYRTQLPAPALAEAKRDFLEVYLREAINSKNRPSPSVLASFDGLLATVTPEDLADPLGPAVERALKKSPAGVLAAVASLAAQLELDLSPYVDSLFLPPALRMLKSMEEEPRTQAMKLVDTLARKVGDAAAFSRTVGGVMDVLAGK-GGVLAQWFQRHACVTALRSLARGARRLPRAALAPATIAALEGLVKAYGKESHEGTRAEIAVGLGDWLGWV-EEGTSPAPGVWETLEKGLEGGVGGNGKEKEGLLLLLLAVQESLLLSPTLKAPMQGSLEEALARVVKEGAKKAVQVGNLEGMVALHCLVEMDGLEGGKEGQYMKMLTERDSWLFAPSQIEAYARAS--APAAISLARLLLTATRSVGVQAVIGAFPDSDADESLGVKNVNAAGMALVELLLHVHADVRREAEAVLKFFLAEDPDTTRMTLLKSMWVKVHQVASRMEVASQEPVNGSEESESTSSSLAGKGRRTQQRAWPCPQRFAEALTVLFP--APSVECMLKGATPGEEKEVADAGSLASLPMAFLLAYHPLVSDSSRQASALWARLMRGGGLHGQEAVEAAFDDISIDLSDEVIQAVLSQGGPR 785          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: CBJ26304.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 127.9 bits (320), Expect = 1.600e-25
Identity = 151/574 (26.31%), Postives = 260/574 (45.30%), Query Frame = 0
Query:  293 KKDFFEVYLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLPLDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARGG---RRLPRSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEMEGLSGSSGEYAK------LLMEKESWLF-----APTQVDACV---RASHLAP-VALSMVRLLVAATRTLGVSAVIGQMANFEEEESLGVRNAKPATLTLLEMLLHPNQEVRIESKNAVALMLQEDAALTRMALVKGLWVKVDLCVARKQEAAGMWAAGAIGDDLDSSVSKAKAEQRGSPCPQRFADALASLFPTVAQEGEGAAAAADAAAEGEVDPGTLACLPMAMVLAHHPVVSESTRQAAGLWHRLMRGHGMGGPGGVEGGLDD--ISVDISDEVIQAI 847
            K+    VY+R A+ +K       LASF++LL+++T +D +  + P LEK  KK+P  +L AV +L   + +DLS +V  +FLP  LR ++S +E+ R  A+ L+G  A++ GD      +V ++  VL GK+ G +AQW+QRH+  +AL  + RGG     +P S        A++GL+ A  +E+HE TRA  +  L  W  L+D     + P +L +L+ G+ GS+++       +  A    L+  P LR  L   + + L + V  G+KK     + +++ +   ++E+        E          LM++ S+LF     AP   D  +    A  LAP V +++  +L  A++ +G     GQ     +  S      + A+L +++ L+ PNQEVR          +  + A+T   LV G    + L   +                                           +  + A  G                      L +A++L+HHP+V  S + A  LW  ++R    GG GG+E  L+D  ++  ++ +++ A+
Sbjct:   38 KQRLLAVYIRYALATKGGCDKHKLASFSTLLASLTPDDFSGAVQPVLEKLQKKNPDSILLAVASLVKHVRIDLSTHVG-IFLPPLLRQLRSSKEDVRRIAVELMGDFAKRCGDPEALQLMVLELSGVLAGKS-GVMAQWYQRHSVFLALEGV-RGGVVSSEMPMSRATELALGAVDGLLPAVEKESHEDTRAVGVGCLTRWALLLDT----IPPKILASLKNGL-GSAARHTAT---IFAAAACELSGCPRLRAQLLSLMPDLLAR-VELGSKKP-NAFHPDAIYSAKVVLEVSAAHQDWVERINEAFPWHALMDQGSFLFPAGVLAPPFADVSLTGDAAGPLAPHVCVALCHVLSLASKLVG-----GQSQRDVQPFS------EAASLAVVQCLVLPNQEVR---------RVATETAVTVCNLVGGSQATL-LKSCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILGSSAPSG---------------------VLAIALLLSHHPLVCHSAKGAISLWGGILR-RAFGGVGGMESCLEDSAVAASVASDLVSAM 555          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: XP_012199095.1 (hypothetical protein SPRG_22144 [Saprolegnia parasitica CBS 223.65] >KDO30185.1 hypothetical protein SPRG_22144 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 104.8 bits (260), Expect = 1.400e-18
Identity = 137/524 (26.15%), Postives = 227/524 (43.32%), Query Frame = 0
Query:  300 YLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLP--LDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARG-GRRLPRSAV-APATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEMEGLSGSSGEYAKLLMEKESWLFAPTQVDACVRASHLAPVALSMVRLLVAATRTLGVSAVIGQMANFEEEESLGVRNAKPATLTLLEMLLHPNQEVRIESKNAVALMLQEDAALTRMALVKGLWVKVDLCVARKQEAAGM--WAAGAIGDDLDSSVSKAKAEQRGSPCPQRFADALASLFPTVAQEGEGAAAAADAAAEGEVDPGTLACLPMAMVLAHHPVVSESTRQ--AAGLWHRL 816
            Y+ +A+ +K +P+ + L ++ +L +T+TA D    + P L + LK+SP  +L A  A+   LP  +DLS YV  +F       +KS++++ R   + LL  +  +  D+A    +V+D+V +L GK  G LAQ++ R A   +L  +A   G+ L  +A  A A+   L  L  A  +EA++  R   L  LG+WL L       LSP + K    G+   +         +++A   +L +       +   L   L  VV +  KK   V +++ V+AL  L  + GLS         ++   +  F  T V   V   H   +  S+      A + +G  A++       + + +       ++++LL  LLH          + VA +        R  +   LW  + L  A  Q    +  W+A    DD D++V  A + Q  S         L ++ P         A    A  E E+    +A  P  +VLAHHP+V    R+   A  W RL
Sbjct:  203 YVHQALEAKVRPTHADLDAYTALTATLTAHDFEATISPVLSRMLKRSPDSLLDATVAVVRALPAKIDLSAYVAPIFGALFPAKLKSVKDDVREACIQLLAAVIARCSDAAAVTSIVTDLVGLLDGKF-GLLAQFYMRDAVFQSLLHVASAVGKTLGSTAARALASDLVLPALPKAIAKEANDVVRNTALWTLGQWLSLHTPSTAALSPEIQKLFEAGLASKTE-------AVVVAYARSLVVVSRTHPEILAPLAPRLASVVAEAQKKP-NVAHLDGVLALVALTNV-GLSAPEVHDVNAILSPTT--FFKTSV---VLLGHQLQLGASLESPEETALKAVG-EALVRVWREVPQSDEI-------SSMSLLVGLLH----------HRVASVRDHCEKHVRALVADQLWTALPLLEAFAQALLTLTPWSAKHATDDADATVYNAPSTQ--SSLAGILRRNLRAIVP---------ARLLPATHESEI----VALFPRLLVLAHHPLVVHGARKDAFASEWTRL 678          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: XP_009842104.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV68479.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 103.2 bits (256), Expect = 4.100e-18
Identity = 99/371 (26.68%), Postives = 177/371 (47.71%), Query Frame = 0
Query:  220 SLSSSPATSDRPSLRDAGIREITRLLENFPSLLPEVYKRRLVSPSFSSSSLWLLATL-VDFYRTRLPLSTYAAA-----KKDFFEVYLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLPLDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARGGRRLP--RSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEM 583
            S+  + + +D   L+ +G + I +L+++ P+   E+Y   + + S ++ S    AT    F+ T+L + T+AA      +      Y   A+ +K +P+ S L S+A  +ST++A++    + P L + LK+SP  +L AV  +   L +DL  Y+  +F+P     ++S +++ R   + L+  + ++  D A    ++++V+ VL GK  G LAQ++QR A       L       P    A A      L  LV A  +EA+EGTR   L  + +WL L+      L   +      G++        A    LL+ R+ ++ A +    + +ELV      V D A K   V +++ V+AL  L  +
Sbjct:  136 SILEATSDTDNARLKLSGHKSILQLVKSSPAYF-ELYFDAISTTSTAADS----ATFQTRFHLTKLLVDTFAATFSNAQRLRLLTSYTYWALEAKVRPTDSQLQSYAGFVSTISADEFASIVEPVLSRLLKRSPDSLLQAVRVMTQSLRIDLGLYLGPMFVPVFTAKLRSQKDDVRINCIGLVDAVLRRCADFAHVQTILTEVLGVLDGK-HGILAQFYQREA---VFTTLYNASLHAPAWEGAAADLAALVLPSLVQASTKEANEGTRYIGLQTVSQWLSLLHPTTNTLPADISAFFTSGLQHKVDSAVVAHAYALLSARETVSTALAQDASIVRELVR-----VVDTANKKPNVLHLDGVLALSVLASL 492          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: XP_008870486.1 (hypothetical protein H310_06999 [Aphanomyces invadans] >ETW00351.1 hypothetical protein H310_06999 [Aphanomyces invadans])

HSP 1 Score: 96.3 bits (238), Expect = 5.000e-16
Identity = 96/385 (24.94%), Postives = 178/385 (46.23%), Query Frame = 0
Query:  205 KALTAQAALVDGLMSSLSSSPATSDRPSLRDAGIREITRLLENFPSLLPEVYKRRLVSPSFSSSSLW-----LLATLVDFYRTRLPLSTYAAAKKDFFEVYLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLPLDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARGGRRLPRSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEE--GKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEM 583
            K + AQ A+++        S + +D   L+  G + I +L+++ P L    +     +P+ + SS +     L    +D + T L +    A +      +    + +K +P+ + L S+A+ ++TV+AE+    + P L + LK+SP  +L AV  +   L +DL  Y++ +F+P     ++S +++ R   + L+  +  +  D      V+++V+ VL GK  G LAQ++QR A    L   +        +      +  L  LV A  +EA+E TR   L  + +WL +++       +S      L+  VE +      ALL L    R+ L+ A +    + +ELV  +E      A K   V +++ V+AL  L  +
Sbjct:  125 KLILAQFAILE--------STSDTDNARLKRGGQKSILQLIKSVPMLFDLYFDAVTATPTAAESSSFQTRFHLAKLFIDTFATTLSV----AQRLRLLTSFTFWTLEAKLRPTDAQLLSYAAFVATVSAEEFASVVEPVLGRLLKRSPDSLLQAVRVMTQHLTVDLGQYLEPIFVPIFTAKLRSQKDDVRMSCIGLVDAVLARCADIGHVKAVLTEVLGVLEGK-HGILAQFYQREAVFTTLYNASLHASSWDIADSKELASLLLPSLVQASAKEANESTRYIGLQTVSKWLAILNPATLPANISAFFTAGLQNKVESAVVAHASALLTL----REQLSAALASDASILRELVRLVE-----NANKKPNVLHLDGVIALTVLASL 487          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: XP_008870487.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW00352.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 96.3 bits (238), Expect = 5.000e-16
Identity = 96/385 (24.94%), Postives = 178/385 (46.23%), Query Frame = 0
Query:  205 KALTAQAALVDGLMSSLSSSPATSDRPSLRDAGIREITRLLENFPSLLPEVYKRRLVSPSFSSSSLW-----LLATLVDFYRTRLPLSTYAAAKKDFFEVYLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLPLDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARGGRRLPRSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEE--GKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEM 583
            K + AQ A+++        S + +D   L+  G + I +L+++ P L    +     +P+ + SS +     L    +D + T L +    A +      +    + +K +P+ + L S+A+ ++TV+AE+    + P L + LK+SP  +L AV  +   L +DL  Y++ +F+P     ++S +++ R   + L+  +  +  D      V+++V+ VL GK  G LAQ++QR A    L   +        +      +  L  LV A  +EA+E TR   L  + +WL +++       +S      L+  VE +      ALL L    R+ L+ A +    + +ELV  +E      A K   V +++ V+AL  L  +
Sbjct:   44 KLILAQFAILE--------STSDTDNARLKRGGQKSILQLIKSVPMLFDLYFDAVTATPTAAESSSFQTRFHLAKLFIDTFATTLSV----AQRLRLLTSFTFWTLEAKLRPTDAQLLSYAAFVATVSAEEFASVVEPVLGRLLKRSPDSLLQAVRVMTQHLTVDLGQYLEPIFVPIFTAKLRSQKDDVRMSCIGLVDAVLARCADIGHVKAVLTEVLGVLEGK-HGILAQFYQREAVFTTLYNASLHASSWDIADSKELASLLLPSLVQASAKEANESTRYIGLQTVSKWLAILNPATLPANISAFFTAGLQNKVESAVVAHASALLTL----REQLSAALASDASILRELVRLVE-----NANKKPNVLHLDGVIALTVLASL 406          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: XP_008606310.1 (hypothetical protein SDRG_02496 [Saprolegnia diclina VS20] >EQC40611.1 hypothetical protein SDRG_02496 [Saprolegnia diclina VS20])

HSP 1 Score: 94.0 bits (232), Expect = 2.500e-15
Identity = 84/291 (28.87%), Postives = 143/291 (49.14%), Query Frame = 0
Query:  300 YLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLP--LDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALAR-GGRRLPRSAV-APATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEMEGLS 587
            Y+ +A+ +K +P+ + L ++ASL +T+TA D    + P L + LK+SP  +L A  A+   LP  +DLS YV ++F       +KS++++ R   + LL  +  +  D+     +V+D+V +L GK  G LAQ++ R A   +L  +A   G+ L  +A    A+   L G+  A  +EA++  R   L  LG+WL L       LS  +      G+   +         +++A   +L +       +   L   L  VV +  KK   V +++ V+AL  L  + GLS
Sbjct:  207 YVHQALEAKVRPTHADLDAYASLTATLTAADFEATISPVLSRMLKRSPDSLLDATVAIVRALPTKIDLSAYVGSIFGALFPAKLKSVKDDVREACIQLLAAVVARCSDATAVTSIVADLVGLLDGKF-GLLAQFYMRDAVFQSLLHVASVVGKTLGSTAARLLASDLVLPGIPKAIAKEANDVVRNTALWTLGQWLSLHTPSTLALSREIQTLFETGLASKTE-------AVVVAYARSLVVVSRTHPEILVPLAPRLASVVAEAQKKP-NVAHLDGVLALVALTNI-GLS 487          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: OQR93727.1 (translational activator GCN1 [Thraustotheca clavata])

HSP 1 Score: 93.6 bits (231), Expect = 3.200e-15
Identity = 76/251 (30.28%), Postives = 125/251 (49.80%), Query Frame = 0
Query:  303 EAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLP--LDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARG-GRRLPRSAVAP-ATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAI----RDALAMAPSLREGL 546
            +A+ SK++P  S L +FA LLSTVTA +    + P L + LK++P  VL +  AL   LP  +DLS YV T+F       +KS++++ R   +AL+  +  +  D    + +V+D++ +L GK  G LAQ++ R A   +L  +A   G+ L  +A    A    L G+  +  +EA++  R   L  L +W+ +        +  +L     G+         A L  L+ I     + L  APSL++ L
Sbjct:  202 QALESKNRPPASDLKAFAPLLSTVTAAEFENTVAPVLSRMLKRAPDSVLDSTVALLNLLPTAIDLSQYVATIFGSLFPAKLKSVKDDVRESCIALVAAVVTRCKDPTAISSIVTDLIGLLDGKF-GLLAQFYMRDAAFQSLNHVAVSVGKTLGSTAARELANNVVLSGMCKSIAKEANDVARNTALWTLAQWVTIHTPSHYHFTSELLALFESGLNNKIDTVVVAYLRALVLISVAHAETLLQAPSLQKRL 451          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: XP_009842106.1 (hypothetical protein H257_15636 [Aphanomyces astaci] >ETV68478.1 hypothetical protein H257_15636 [Aphanomyces astaci])

HSP 1 Score: 92.0 bits (227), Expect = 9.400e-15
Identity = 100/392 (25.51%), Postives = 177/392 (45.15%), Query Frame = 0
Query:  220 SLSSSPATSDRPSLRDAGIREITRLLENFPSLLPEVYKRRLVSPSFSSSSLWLLATL-VDFYRTRLPLSTYAAA-----KKDFFEVYLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLPLDLSPYV---------------------DTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARGGRRLP--RSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEM 583
            S+  + + +D   L+ +G + I +L+++ P+   E+Y   + + S ++ S    AT    F+ T+L + T+AA      +      Y   A+ +K +P+ S L S+A  +ST++A++    + P L + LK+SP  +L AV  +   L +DL  YV                       +F+P     ++S +++ R   + L+  + ++  D A    ++++V+ VL GK  G LAQ++QR A       L       P    A A      L  LV A  +EA+EGTR   L  + +WL L+      L   +      G++        A    LL+ R+ ++ A +    + +ELV      V D A K   V +++ V+AL  L  +
Sbjct:  136 SILEATSDTDNARLKLSGHKSILQLVKSSPAYF-ELYFDAISTTSTAADS----ATFQTRFHLTKLLVDTFAATFSNAQRLRLLTSYTYWALEAKVRPTDSQLQSYAGFVSTISADEFASIVEPVLSRLLKRSPDSLLQAVRVMTQSLRIDLGLYVILFQMDKYRGHLSCKCMCRYLGPMFVPVFTAKLRSQKDDVRINCIGLVDAVLRRCADFAHVQTILTEVLGVLDGK-HGILAQFYQREA---VFTTLYNASLHAPAWEGAAADLAALVLPSLVQASTKEANEGTRYIGLQTVSQWLSLLHPTTNTLPADISAFFTSGLQHKVDSAVVAHAYALLSARETVSTALAQDASIVRELVR-----VVDTANKKPNVLHLDGVLALSVLASL 513          
BLAST of NO02G05040 vs. NCBI_GenBank
Match: XP_010936072.1 (PREDICTED: protein ILITYHIA [Elaeis guineensis])

HSP 1 Score: 88.6 bits (218), Expect = 1.000e-13
Identity = 118/463 (25.49%), Postives = 212/463 (45.79%), Query Frame = 0
Query:  253 PEVYKR---RLVSPSFSS-SSLWLLATLVDFYRTRLPLSTYAAAKKDFFEVYLREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGVLGAVTALATQLPLDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLAQKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALAR--GGRRLPRSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKGLSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELVEPLEKVVRDGAKKALQVGNVESVVALHCLVEMEGLSGSSGEYAKLLMEKESW-LFAPTQVDACVRASHLAPVALSMVRLLVAATRTLGVSAVIGQMANFEEEESLGVRNAKPATLTLLEMLLHPNQEVRIESKNAVALMLQEDAALTRMALVKGLWVKV 709
            P++YK     L   S SS     L+  L++F  T    S +   K  F E+Y++  +N+K +PS +   +F SLL  +  E+    + P+  K LK++P  VL +V  L   + LDLS Y    FL   L   + ++E  R  AL ++G L+Q   D  V   + S  +  ++G + G LA  +QR   + AL+ L++  GG+   R  +AP+ ++    L++ +  +  E  +  IL+AL  WL       + + P V+  +  G+    +  K  L  L L  ++A ++           L+EPL ++V+ G  KA Q   ++ + AL  + ++  +   + E   +LM+++ W L A  +       S L PV+L           ++ +  V+     +   E L +   K     LL ++ HP+ EVR  + +A   ++     +  + L    W+ +
Sbjct:  162 PDIYKMYIGELKDSSISSRDGAELIKILLEFSIT--TPSLFEEYKPVFLELYVKTVLNAKDRPSRAVGEAFQSLLMHLEHEEFKTFVVPSSVKMLKRNPEIVLESVGDLLKSVNLDLSKYA-LEFLSVVLPQARHVDEARRMRALTIVGCLSQMSSDPDVLPSMFS-AIKAIIGGSEGKLAVPYQRIGMINALQELSKAPGGKTFNR--LAPSVSSF---LLSCYKDDGSEEVKLAILSALASWL---SRSAEAVQPDVVSFIASGLREKETLRKGHLRCLQLICKNADSLT------RVSSLLEPLVQLVKTGFSKATQ--RLDGIYALFSVAKILSIDSKAEE---ILMKEKLWALIAQNE-------SSLLPVSLVSKLSNEDCITSIDLLEVLLVEYLYRVSEFLSI---KTLLQLLLYLICHPSWEVRKAAHDATRRIVSSLDLVAELLLEFTNWLSI 591          
The following BLAST results are available for this feature:
BLAST of NO02G05040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30172.15.000e-22656.75translational activator [Nannochloropsis gaditana][more]
CBJ26304.11.600e-2526.31conserved unknown protein [Ectocarpus siliculosus][more]
XP_012199095.11.400e-1826.15hypothetical protein SPRG_22144 [Saprolegnia paras... [more]
XP_009842104.14.100e-1826.68hypothetical protein, variant 1 [Aphanomyces astac... [more]
XP_008870486.15.000e-1624.94hypothetical protein H310_06999 [Aphanomyces invad... [more]
XP_008870487.15.000e-1624.94hypothetical protein, variant 1 [Aphanomyces invad... [more]
XP_008606310.12.500e-1528.87hypothetical protein SDRG_02496 [Saprolegnia dicli... [more]
OQR93727.13.200e-1530.28translational activator GCN1 [Thraustotheca clavat... [more]
XP_009842106.19.400e-1525.51hypothetical protein H257_15636 [Aphanomyces astac... [more]
XP_010936072.11.000e-1325.49PREDICTED: protein ILITYHIA [Elaeis guineensis][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05040.1NO02G05040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05040.1NO02G05040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05040 ID=NO02G05040|Name=NO02G05040|organism=Nannochloropsis oceanica|type=gene|length=2782bp
ATGGCTATCGCAGACCCTGCCGCTGCTGCAGTTGAGGATGGTGGCCGTGG
ATTGGACAACGGCGGCATGGAGGAAGAGCTTACGCTGGCACGGCGCATGG
CGTACGCGGCGTCGTCCAAAGGCGAGTTGCTGGGAGTGATTCGGgtacgt
acatcggcggtaggaaaaaagcaggcgggtttccacctctcctcccaccc
acacttacctctctatctctctcaattctttacgttggcgtcaccaccat
gcagacatgtgatctctttcttccgaatgccctgtcgattcttattttgt
ctcaattgttccaatcaaaacaaatatgctctagAAAACCTTGCTCCCCC
TCGTCAGGGACGCCGCCCCCGACGACAACGAGTCCACCACTGGCTTCTCC
CGCTCCGCCACTCGCAGTCTGTGCCTTTTACTCGTCGAATTGGCCTTGAG
CGCAACCTGCAACGACTTTAAAAGCATCGGGCGCGCTGTGAGGGAAGTGC
TGCGGTCAGGGCTCGAAGACGCCCCCAGCCACTGGCCTTTACTCCCTGAC
GTCATGGCGACAGTCTTGACAGGTGCGCAAGCCCGGTGCACTTTTGCAGA
GGCACGCGTGGCGAGTTTACGATTGTGGGCGCAATTGTTGGAGCACCAGT
TAAGGGATGCGAGCAAGCGGAAGCGTTGGAAACAAGAAGGGAAACGACGT
AAGCAGGCGCTGCAGATGAATAACGGCGAGGAGCAGCAGCAGCAGCATGT
GCCACCCCCGGTACCTACTGTGGAATCACTGCTTAAGTCAGAGGTAGTGG
CCAAGGCACTTACAGCCCAAGCTGCCTTGGTGGACGGCCTTATGTCGTCG
CTCTCCTCCTCCCCAGCCACCTCCGACCGTCCCTCCCTCCGCGATGCCGG
CATCCGAGAAATCACCCGCCTGCTCGAAAACTTTCCTTCCTTACTGCCCG
AGGTTTACAAACGACGCCTTGTTTCCCCTTCCTTCTCCTCGTCCTCCCTG
TGGCTCCTTGCCACATTAGTAGATTTCTATCGTACCCGCCTCCCTCTCTC
CACCTACGCCGCGGCCAAGAAAGATTTTTTTGAAGTGTACCTCCGCGAGG
CCATTAACAGCAAAAGCAAGCCCAGCCCCTCCTCCCTCGCCAGCTTTGCC
TCCCTCCTTTCCACCGTCACCGCTGAAGACATCACTGAACCCTTGGGTCC
TGCTCTTGAAAAAGCTCTCAAGAAATCACCTGCAGGCGTGCTTGGCGCCG
TTACAGCCCTTGCTACGCAGCTGCCCTTAGACCTGAGTCCTTACGTGGAT
ACGCTCTTTTTGCCTGCGGCCTTAAGGATGGTGAAGAGCATGGAGGAAGA
ACCAAGAGGGGAGGCGTTGGCACTGCTGGGCACATTGGCGCAGAAGGTGG
GGGATTCAGCAGTGTTTGCCCGAGTGGTGAGTGACGTGGTCAATGTCTTG
TTGGGGAAGACGGGGGGAGCACTCGCGCAATGGTTCCAAAGACATGCATG
CGTGGTGGCTTTACGCGCTTTAGCGAGGGGGGGAAGGAGGTTACCGAGGT
CGGCTGTGGCGCCCGCCACGACGGCGGCGCTGGAAGGGCTGGTGGCTGCA
TTTGGGAGGGAGGCCCATGAGGGAACGAGGGCGGAGATTCTCGCAGCACT
CGGGGAATGGTTGGGCTTGGTGGATGAGGAGGGGAAAGGGTTGAGTCCCA
TGGTGTTGAAGGCGTTGAGGAAGGGGGTGGAGGGAAGTAGCAGTAAGGAT
AAAGAGGCGCTGTTGCCGCTGTTGCTGGCTATCCGAGATGCGCTGGCGAT
GGCACCTTCGTTGAGAGAGGGATTAAAGAAGGAGCTGGTCGAGCCGCTTG
AGAAAGTGGTGAGGGATGGCGCGAAAAAGGCCCTGCAGGTTGGAAACGTG
GAGTCGGTGGTGGCGTTGCATTGTTTGGTGGAGATGGAGGGCTTGAGTGG
CAGCAGTGGGGAGTATGCGAAGCTTCTGATGGAGAAGGAGTCCTGGCTAT
TTGCCCCAACACAGGTGGACGCATGTGTACGCGCTTCGCATTTAGCCCCG
GTGGCCTTATCCATGGTCAGATTGCTTGTAGCGGCGACACGGACACTGGG
GGTGTCGGCTGTGATCGGTCAAATGGCGAATTTTGAGGAGGAGGAAAGTC
TCGGTGTGCGGAATGCCAAGCCTGCCACGCTGACGTTGCTTGAGATGCTT
CTACATCCGAACCAGGAGGTGAGAATAGAGAGTAAGAATGCGGTGGCGCT
CATGTTGCAGGAGGATGCAGCATTGACGAGGATGGCGCTAGTGAAGGGAT
TATGGGTGAAAGTTGACCTGTGTGTGGCAAGGAAGCAGGAGGCGGCGGGG
ATGTGGGCTGCTGGTGCGATTGGGGACGACCTCGACTCCTCTGTTTCGAA
GGCTAAAGCGGAGCAACGTGGTTCCCCTTGTCCGCAGCGATTTGCGGATG
CCTTGGCTTCTCTCTTTCCCACAGTCGCACAGGAGGGAGAGGGTGCGGCT
GCTGCGGCTGATGCTGCTGCAGAGGGCGAGGTTGACCCAGGCACACTGGC
TTGCTTGCCCATGGCGATGGTCCTAGCCCACCATCCTGTCGTTTCTGAGT
CTACTCGACAAGCGGCAGGGTTGTGGCATCGGCTGATGCGTGGCCACGGT
ATGGGAGGCCCGGGAGGGGTGGAGGGCGGGTTGGATGATATTTCGGTGGA
TATTTCAGATGAGGTCATTCAGGCGATAATGGCCCCGGGGGGGGGGCGAA
GGCGCATCGTGTGGCGGGACAGCGGTGTCTGA
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protein sequence of NO02G05040.1

>NO02G05040.1-protein ID=NO02G05040.1-protein|Name=NO02G05040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=864bp
MAIADPAAAAVEDGGRGLDNGGMEEELTLARRMAYAASSKGELLGVIRKT
LLPLVRDAAPDDNESTTGFSRSATRSLCLLLVELALSATCNDFKSIGRAV
REVLRSGLEDAPSHWPLLPDVMATVLTGAQARCTFAEARVASLRLWAQLL
EHQLRDASKRKRWKQEGKRRKQALQMNNGEEQQQQHVPPPVPTVESLLKS
EVVAKALTAQAALVDGLMSSLSSSPATSDRPSLRDAGIREITRLLENFPS
LLPEVYKRRLVSPSFSSSSLWLLATLVDFYRTRLPLSTYAAAKKDFFEVY
LREAINSKSKPSPSSLASFASLLSTVTAEDITEPLGPALEKALKKSPAGV
LGAVTALATQLPLDLSPYVDTLFLPAALRMVKSMEEEPRGEALALLGTLA
QKVGDSAVFARVVSDVVNVLLGKTGGALAQWFQRHACVVALRALARGGRR
LPRSAVAPATTAALEGLVAAFGREAHEGTRAEILAALGEWLGLVDEEGKG
LSPMVLKALRKGVEGSSSKDKEALLPLLLAIRDALAMAPSLREGLKKELV
EPLEKVVRDGAKKALQVGNVESVVALHCLVEMEGLSGSSGEYAKLLMEKE
SWLFAPTQVDACVRASHLAPVALSMVRLLVAATRTLGVSAVIGQMANFEE
EESLGVRNAKPATLTLLEMLLHPNQEVRIESKNAVALMLQEDAALTRMAL
VKGLWVKVDLCVARKQEAAGMWAAGAIGDDLDSSVSKAKAEQRGSPCPQR
FADALASLFPTVAQEGEGAAAAADAAAEGEVDPGTLACLPMAMVLAHHPV
VSESTRQAAGLWHRLMRGHGMGGPGGVEGGLDDISVDISDEVIQAIMAPG
GGRRRIVWRDSGV*
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Synonyms
Publications