NO02G04900, NO02G04900 (gene) Nannochloropsis oceanica

Overview
NameNO02G04900
Unique NameNO02G04900
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1209
Alignment locationchr2:1319672..1320880 -

Link to JBrowse

Properties
Property NameValue
DescriptionAsparagine synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1319672..1320880 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004066asparagine synthase (glutamine-hydrolyzing) activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006529asparagine biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR005232LarE
IPR001962Asn_synthase
Homology
BLAST of NO02G04900 vs. NCBI_GenBank
Match: EWM30195.1 (Asparagine synthase [Nannochloropsis gaditana])

HSP 1 Score: 375.2 bits (962), Expect = 2.600e-100
Identity = 209/342 (61.11%), Postives = 249/342 (72.81%), Query Frame = 0
Query:   47 ATSSPPNTKHDSLLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNY-----REEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATL-GQGGREGGAAGL--LGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNGLGGTTRIRNKGHGG 381
            +TSS    +  +LLA ALDRVR  GT  G NL+AYSGGVDSSLVAALV++ FP+NS+ACIGLSASLP  QL+LAR++AA+I IPL+EV T EG  P YVANRG+SCFHCK HLYTALQAVAA A  +          H+    S  T       G        V LFNGTNADDR+DPTRVGLKAA  F+VRSPIDHL K EVR LA+A+ LPNW+HAASPCLRSRLA GVPA+E HLR+VE AE +V+ATL G+   + G +GL  LGVHHNVRVRL++ GKA+IE+D ELLE AAS+    EGR K ELGF +V+LRAFKSGSV+ +   T++ +   GG
Sbjct:   24 STSSTNQEETSTLLACALDRVRLEGTSTGTNLIAYSGGVDSSLVAALVRQVFPSNSVACIGLSASLPDNQLTLARQVAAHIGIPLREVPTYEGAAPEYVANRGMSCFHCKNHLYTALQAVAAVAGTHMNGPLSSNFLHSSQRRSTETLQHVKLNGADASAPSAVALFNGTNADDRRDPTRVGLKAATKFKVRSPIDHLTKGEVRLLAKAMNLPNWRHAASPCLRSRLAFGVPALEAHLRRVETAERIVKATLGGKLDDKEGESGLSKLGVHHNVRVRLMARGKAMIELDVELLEIAASYLSTFEGRFKKELGFTEVSLRAFKSGSVSSV---TKVASGTEGG 362          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: CBJ31929.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 268.9 bits (686), Expect = 2.600e-68
Identity = 166/334 (49.70%), Postives = 210/334 (62.87%), Query Frame = 0
Query:   75 GANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEA-----QNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDA-ELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNGLGGTT---------RIRNKGHGGEEVEQVSASFASS 394
            G N+VA+SGGVDSSLVAALV  AFP +S AC+G+S++LP+AQL LAR +A  I IPL E++T EG  P Y+AN G SCFHCKTHLY+AL+AVA +A     ++    V   + + S     GA+  GG  +    V LFNGTN DD++D TRVGLKAA +F+V SPID L K EVR +A+ LGLPNW HAASPCLRSRLA GV A  E L  VE AE+  R  L            LGV HN+RVR +   KA++EVDA E+LE A      +   +   LGF +V +R F+SG+V+G G TT          +  K   G EV +V  S A++
Sbjct:   22 GKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPEKLVLVEKAEDAARKRLD-----------LGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRS-LILPLGFGEVDVRPFRSGAVSG-GLTTPVAEQQKESEVNTKNLDGVEVYRVHGSTAAA 342          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_009844010.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV66480.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 261.2 bits (666), Expect = 5.500e-66
Identity = 149/308 (48.38%), Postives = 195/308 (63.31%), Query Frame = 0
Query:   59 LLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNG 367
            +L   L RVRQ G+    N+VAYSGGVDSSLVAALV R FP NS+AC+G+SA+LP  QL LAR +A+ I IPL E  T+EG+ P YV N+G SC++CKT+LYT L  VAA          H K            AQG  + P  +  +FNGTNADD+ DPTR+GL AA  F+V SP++HL+K  VR++++ LGLPNW +AASPCLRSRLA GV A  +HL ++E AE  VR++L            L    N+RVR L+  +A +E+DAE   +     +     +  +LGF  V +R+FKSGSV+G
Sbjct:    1 MLDQLLARVRQAGSSKHVNIVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALPQDQLLLARNVASAIGIPLWEARTSEGNDPRYVENKGQSCYYCKTNLYTTLNQVAA----------HVK------------AQGCSSSPGVIPVMFNGTNADDKLDPTRLGLVAATEFQVVSPLEHLSKASVRQISKDLGLPNWNYAASPCLRSRLAFGVSANPDHLARIEKAEGEVRSSLA-----------LARTDNLRVRFLANNRAAVELDAEKERALLPTQIHHVETICRDLGFDHVVVRSFKSGSVSG 275          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_009844008.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV66481.1 hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 258.5 bits (659), Expect = 3.500e-65
Identity = 147/308 (47.73%), Postives = 193/308 (62.66%), Query Frame = 0
Query:   59 LLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNG 367
            +L   L RVRQ G+    N+VAYSGGVDSSLVAALV R FP NS+AC+G+SA+LP  QL LAR +A+ I IPL E  T+EG+ P YV N+G SC++CKT+LYT L  VAA          H K                G+ P  +  +FNGTNADD+ DPTR+GL AA  F+V SP++HL+K  VR++++ LGLPNW +AASPCLRSRLA GV A  +HL ++E AE  VR++L            L    N+RVR L+  +A +E+DAE   +     +     +  +LGF  V +R+FKSGSV+G
Sbjct:    1 MLDQLLARVRQAGSSKHVNIVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALPQDQLLLARNVASAIGIPLWEARTSEGNDPRYVENKGQSCYYCKTNLYTTLNQVAA----------HVKAQ--------------GSSPGVIPVMFNGTNADDKLDPTRLGLVAATEFQVVSPLEHLSKASVRQISKDLGLPNWNYAASPCLRSRLAFGVSANPDHLARIEKAEGEVRSSLA-----------LARTDNLRVRFLANNRAAVELDAEKERALLPTQIHHVETICRDLGFDHVVVRSFKSGSVSG 273          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_009844011.1 (hypothetical protein H257_17062 [Aphanomyces astaci] >ETV66479.1 hypothetical protein H257_17062 [Aphanomyces astaci])

HSP 1 Score: 249.6 bits (636), Expect = 1.600e-62
Identity = 149/329 (45.29%), Postives = 195/329 (59.27%), Query Frame = 0
Query:   59 LLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTR---------------------VGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNG 367
            +L   L RVRQ G+    N+VAYSGGVDSSLVAALV R FP NS+AC+G+SA+LP  QL LAR +A+ I IPL E  T+EG+ P YV N+G SC++CKT+LYT L  VAA          H K            AQG  + P  +  +FNGTNADD+ DPTR                     +GL AA  F+V SP++HL+K  VR++++ LGLPNW +AASPCLRSRLA GV A  +HL ++E AE  VR++L            L    N+RVR L+  +A +E+DAE   +     +     +  +LGF  V +R+FKSGSV+G
Sbjct:    1 MLDQLLARVRQAGSSKHVNIVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALPQDQLLLARNVASAIGIPLWEARTSEGNDPRYVENKGQSCYYCKTNLYTTLNQVAA----------HVK------------AQGCSSSPGVIPVMFNGTNADDKLDPTRLGTNVHIYSSSSTLVLFIMFCIGLVAATEFQVVSPLEHLSKASVRQISKDLGLPNWNYAASPCLRSRLAFGVSANPDHLARIEKAEGEVRSSLA-----------LARTDNLRVRFLANNRAAVELDAEKERALLPTQIHHVETICRDLGFDHVVVRSFKSGSVSG 296          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_008870429.1 (hypothetical protein H310_06956 [Aphanomyces invadans] >ETW01431.1 hypothetical protein H310_06956 [Aphanomyces invadans])

HSP 1 Score: 244.6 bits (623), Expect = 5.300e-61
Identity = 143/308 (46.43%), Postives = 188/308 (61.04%), Query Frame = 0
Query:   59 LLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNG 367
            LL   L RVR  G+    N+VAYSGGVDSSLVAALV R FP NS+AC+G+SA+L   QL+LAR++A  I IPL E  T+EG+ P YV N+G SC++CKT+LYT L  VA   +                      AQ  G  P     LFNGTNADD+ DPTR+GL AA  F+V SP+++L K  VR++++ +GLPNW +AASPCLRSRLA GV A  +HL ++E AE  VR+T+            L    N+RVR L+  +A +E+DA  + +     +     +  ELGF D  +R FKSGS++G
Sbjct:    2 LLENLLARVRHAGSSKHVNVVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALSQDQLTLARDVATAIGIPLWETRTSEGEDPRYVENKGQSCYYCKTNLYTTLSQVAERVK----------------------AQSPGVAP----VLFNGTNADDKFDPTRLGLVAATEFQVVSPLENLTKASVRQISKQIGLPNWNYAASPCLRSRLAFGVAANPDHLARIEKAEHAVRSTVA-----------LTPVDNLRVRFLAHNRAAVELDAATVRALLPRQVDAIQVICKELGFDDAIVRPFKSGSLSG 272          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_012208588.1 (hypothetical protein SPRG_13918, partial [Saprolegnia parasitica CBS 223.65] >KDO20707.1 hypothetical protein SPRG_13918, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 239.6 bits (610), Expect = 1.700e-59
Identity = 148/319 (46.39%), Postives = 188/319 (58.93%), Query Frame = 0
Query:   71 GTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNGLGGTTRIRNKGHGGEEVEQVSAS 390
            G+P   N+VA+SGGVDSS+VAALV  AFPTNS+AC+G+SA+LPS QL+LAR++A  I IPL E  T EG  P Y+ N+G SC++CKT+LYT L  VA         VH                  G  +P     LFNGTNADD+ DPTR+GL AA  F+V SP+  L K++VR LA   GL NW  AASPCLRSRLA GV A  +HL++V AAE  VR+ L            L  H N+RVR L +  A IE+DA    + +    A+      ELGF    +RAF+SGSV+G     ++    H   +V  VSA+
Sbjct:   13 GSPKTLNVVAFSGGVDSSVVAALVHEAFPTNSVACLGVSAALPSEQLALARKVATDIGIPLWETPTTEGADPLYIENKGQSCYYCKTNLYTTLNDVAT-------HVH--------------TTHRGSGRP----RLFNGTNADDKLDPTRLGLVAASEFQVVSPLQDLTKSDVRALANERGLLNWNFAASPCLRSRLAFGVTATADHLQRVAAAEAFVRSFL-----------RLAPHENLRVRFLPQNHAAIELDAARHLALSVTETAILAAKCVELGFTKTHVRAFRSGSVSGFASNVQV---VHSTNKVVHVSAN 292          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_009844012.1 (hypothetical protein, variant 4 [Aphanomyces astaci] >ETV66483.1 hypothetical protein, variant 4 [Aphanomyces astaci])

HSP 1 Score: 239.2 bits (609), Expect = 2.200e-59
Identity = 133/266 (50.00%), Postives = 171/266 (64.29%), Query Frame = 0
Query:   59 LLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVI 325
            +L   L RVRQ G+    N+VAYSGGVDSSLVAALV R FP NS+AC+G+SA+LP  QL LAR +A+ I IPL E  T+EG+ P YV N+G SC++CKT+LYT L  VAA          H K            AQG  + P  +  +FNGTNADD+ DPTR+GL AA  F+V SP++HL+K  VR++++ LGLPNW +AASPCLRSRLA GV A  +HL ++E AE  VR++L            L    N+RVR L+  +A +
Sbjct:    1 MLDQLLARVRQAGSSKHVNIVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALPQDQLLLARNVASAIGIPLWEARTSEGNDPRYVENKGQSCYYCKTNLYTTLNQVAA----------HVK------------AQGCSSSPGVIPVMFNGTNADDKLDPTRLGLVAATEFQVVSPLEHLSKASVRQISKDLGLPNWNYAASPCLRSRLAFGVSANPDHLARIEKAEGEVRSSLA-----------LARTDNLRVRFLANNRAAV 233          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_008615046.1 (hypothetical protein SDRG_10812 [Saprolegnia diclina VS20] >EQC31647.1 hypothetical protein SDRG_10812 [Saprolegnia diclina VS20])

HSP 1 Score: 237.3 bits (604), Expect = 8.500e-59
Identity = 143/316 (45.25%), Postives = 188/316 (59.49%), Query Frame = 0
Query:   71 GTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNGLGGTTRIRNKGHGGEEVEQV 387
            G+P+  N+VA+SGGVDSS+VAALV+ AFPTNS+AC+G+SA+LPS QL+LAR++A  I IPL E  T EG  P Y+ N+G SC++CKT+LYT L  VA         VH                Q    +P     LFNGTNADD+ DPTR+GL AA  F+V SP+  L K++VR LA   GL NW  AASPCLRSRLA GV A  +HL++VEAAE  VR+ L            L    N+RVR L    A IE+DA    + ++   A+      +LGF    +RAF+SGSV+G     ++ +  +    + Q+
Sbjct:    9 GSPNTLNVVAFSGGVDSSVVAALVREAFPTNSVACLGVSAALPSEQLALARKVATDIGIPLWETPTTEGADPLYIENKGQSCYYCKTNLYTTLNDVAT-------HVH--------------TTQRSSGQP----RLFNGTNADDKLDPTRLGLVAASKFQVVSPLQDLTKSDVRALANERGLLNWDFAASPCLRSRLAFGVTASSDHLQRVEAAEAFVRSFL-----------RLAPQENLRVRFLPLNHAAIELDAARHLALSATETAILAAKCVDLGFTQTHVRAFRSGSVSGFAANVQVTSSTNKAVHMNQL 288          
BLAST of NO02G04900 vs. NCBI_GenBank
Match: XP_008870430.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW01432.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 236.1 bits (601), Expect = 1.900e-58
Identity = 141/308 (45.78%), Postives = 186/308 (60.39%), Query Frame = 0
Query:   59 LLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPTNSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGLSCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNKPSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQALGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREGGAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELGFADVTLRAFKSGSVNG 367
            LL   L RVR  G+    N+VAYSGGVDSSLVAALV R FP NS+AC+G+SA+L   QL+LAR++A  I IPL E  T+EG+ P YV N+G SC++CKT+LYT L  VA   +                      AQ  G  P     LFNGTNADD+ DPTR+   AA  F+V SP+++L K  VR++++ +GLPNW +AASPCLRSRLA GV A  +HL ++E AE  VR+T+            L    N+RVR L+  +A +E+DA  + +     +     +  ELGF D  +R FKSGS++G
Sbjct:    2 LLENLLARVRHAGSSKHVNVVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALSQDQLTLARDVATAIGIPLWETRTSEGEDPRYVENKGQSCYYCKTNLYTTLSQVAERVK----------------------AQSPGVAP----VLFNGTNADDKFDPTRL---AATEFQVVSPLENLTKASVRQISKQIGLPNWNYAASPCLRSRLAFGVAANPDHLARIEKAEHAVRSTVA-----------LTPVDNLRVRFLAHNRAAVELDAATVRALLPRQVDAIQVICKELGFDDAIVRPFKSGSLSG 269          
The following BLAST results are available for this feature:
BLAST of NO02G04900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30195.12.600e-10061.11Asparagine synthase [Nannochloropsis gaditana][more]
CBJ31929.12.600e-6849.70conserved unknown protein [Ectocarpus siliculosus][more]
XP_009844010.15.500e-6648.38hypothetical protein, variant 1 [Aphanomyces astac... [more]
XP_009844008.13.500e-6547.73hypothetical protein, variant 2 [Aphanomyces astac... [more]
XP_009844011.11.600e-6245.29hypothetical protein H257_17062 [Aphanomyces astac... [more]
XP_008870429.15.300e-6146.43hypothetical protein H310_06956 [Aphanomyces invad... [more]
XP_012208588.11.700e-5946.39hypothetical protein SPRG_13918, partial [Saproleg... [more]
XP_009844012.12.200e-5950.00hypothetical protein, variant 4 [Aphanomyces astac... [more]
XP_008615046.18.500e-5945.25hypothetical protein SDRG_10812 [Saprolegnia dicli... [more]
XP_008870430.11.900e-5845.78hypothetical protein, variant 1 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007169NSK007169Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04900.1NO02G04900.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575262gene_1084Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100090g3gene473Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04900.1NO02G04900.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04900 ID=NO02G04900|Name=NO02G04900|organism=Nannochloropsis oceanica|type=gene|length=1209bp
ATGCACAGCTCCGCCAGCACCATGCGGAGGTCTGGGAAGGCCATGACCTT
CAGCAGCACCATATTCAGTGCTTTTCGGCTCCCCATCACGGTCAGCAGAC
GGGTTTTTTCCTCCTCCCAGCCCTCCCCCACCACCCCAGCCACCTCATCA
CCCCCCAACACCAAACACGACTCTTTGCTTGCCTATGCCTTGGACCGCGT
CCGACAAGGCGGCACGCCACACGGGGCCAACTTGGTGGCCTACTCTGGCG
GAGTGGACTCCAGCCTTGTGGCCGCCTTGGTCAAACGGGCGTTCCCCACC
AATTCCTTAGCCTGCATTGGCCTATCAGCGTCCTTGCCCAGCGCACAACT
AAGCCTGGCACGAGAAATAGCTGCTTACATTGACATTCCTTTGAAAGAGG
TCACCACCGCTGAAGGTGACACACCCGGGTACGTGGCAAACCGGGGACTG
AGCTGCTTTCATTGCAAGACGCATTTGTACACGGCCTTGCAAGCCGTCGC
AGCTGAGGCGCAGAACTACCGCGAGGAAGTGCATCACGCCAAAACAAATA
TAAGTTTAGCAACTGAAACAGGAGCTAACGCACAGGGGGGGGGAAATAAG
CCTTCATTCGTCGTCACGCTCTTTAATGGCACGAACGCCGATGATAGACA
AGATCCGACGCGGGTTGGCTTAAAGGCAGCGCGGAATTTTAGGGTGCGAA
GCCCGATAGACCACTTGAACAAAAATGAGGTTCGGAAATTAGCACAAGCT
CTCGGTCTTCCAAATTGGCAGCATGCGGCTAGCCCTTGCCTGCGGTCGCG
GTTGGCGTTGGGCGTGCCGGCAGTAGAGGAGCACTTGCGAAAAGTGGAGG
CGGCTGAGGAGTTGGTGCGGGCGACGCTAGGACAAGGAGGAAGAGAAGGA
GGGGCAGCAGGATTGTTAGGCGTGCATCATAATGTCCGTGTGCGGCTTTT
ATCGGAGGGGAAGGCAGTGATTGAAGTTGATGCGGAGCTATTGGAGTCGG
CAGCCTCGTTTTTCCTCGCGATGGAAGGGAGAATGAAAGCTGAATTGGGT
TTCGCGGACGTAACTCTCCGTGCGTTCAAAAGTGGGAGTGTAAATGGCTT
GGGCGGGACGACGAGGATAAGAAACAAGGGTCATGGAGGAGAAGAGGTCG
AACAGGTGAGTGCTTCATTTGCGTCGAGCAGTTGTCACCGGAATTGCGCA
GAGAAATGA
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protein sequence of NO02G04900.1

>NO02G04900.1-protein ID=NO02G04900.1-protein|Name=NO02G04900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MHSSASTMRRSGKAMTFSSTIFSAFRLPITVSRRVFSSSQPSPTTPATSS
PPNTKHDSLLAYALDRVRQGGTPHGANLVAYSGGVDSSLVAALVKRAFPT
NSLACIGLSASLPSAQLSLAREIAAYIDIPLKEVTTAEGDTPGYVANRGL
SCFHCKTHLYTALQAVAAEAQNYREEVHHAKTNISLATETGANAQGGGNK
PSFVVTLFNGTNADDRQDPTRVGLKAARNFRVRSPIDHLNKNEVRKLAQA
LGLPNWQHAASPCLRSRLALGVPAVEEHLRKVEAAEELVRATLGQGGREG
GAAGLLGVHHNVRVRLLSEGKAVIEVDAELLESAASFFLAMEGRMKAELG
FADVTLRAFKSGSVNGLGGTTRIRNKGHGGEEVEQVSASFASSSCHRNCA
EK*
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Synonyms
Publications