NO02G04880, NO02G04880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G04880 vs. NCBI_GenBank
Match: EWM30194.1 (hypothetical protein Naga_100090g5 [Nannochloropsis gaditana]) HSP 1 Score: 197.2 bits (500), Expect = 3.100e-47 Identity = 94/126 (74.60%), Postives = 107/126 (84.92%), Query Frame = 0 Query: 1 MVKFGEALSAFIKFLAGPTYSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAILVQRGSSRSNDCAIM 127 MVK G A++A KFL PTY+ NDYELAIK SK+LEHLLE EWGA GKGLHEKI+WVQ S SPLP+DLMRRMRFLATIRNKLIHD+ +T+IE+R++FIET+ERSKREL AILVQRG DCAIM Sbjct: 1 MVKLGGAIAAIFKFLTSPTYAKNDYELAIKTSKDLEHLLEQEWGADGKGLHEKITWVQHSDSPLPDDLMRRMRFLATIRNKLIHDITYTRIEDRARFIETFERSKRELHAILVQRGKKPGPDCAIM 126
BLAST of NO02G04880 vs. NCBI_GenBank
Match: XP_008877081.1 (hypothetical protein H310_11968 [Aphanomyces invadans] >ETV94319.1 hypothetical protein H310_11968 [Aphanomyces invadans]) HSP 1 Score: 109.8 bits (273), Expect = 6.400e-21 Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0 Query: 20 YSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAILVQRGSSRSNDCAIM 127 +SSNDYEL IK SK LE++LE E+GA GKGLHEKI+ V S SP L+++MRFLATIRNKLIH+ F +I +R FI +E + EL+A++ R S++C++M Sbjct: 10 HSSNDYELVIKCSKELEYILECEFGATGKGLHEKITAVSGSLSP---QLVKQMRFLATIRNKLIHERGFDRIPDRGHFISQFEAAAGELEALVSARHGGTSSNCSVM 113
BLAST of NO02G04880 vs. NCBI_GenBank
Match: OQS07949.1 (hypothetical protein THRCLA_00063, partial [Thraustotheca clavata]) HSP 1 Score: 108.6 bits (270), Expect = 1.400e-20 Identity = 54/107 (50.47%), Postives = 79/107 (73.83%), Query Frame = 0 Query: 20 YSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAILVQRGSSRSNDCAIM 127 +SSNDYEL IK SK LE++LE+E+GA G+GLHEKIS +++P +L+++MR+LATIRNKLIH+ F I +R+ FI +E+S +EL++I+ R + +C IM Sbjct: 10 HSSNDYELVIKCSKELEYILENEFGATGRGLHEKIS---SANAPFSAELIKQMRYLATIRNKLIHERGFDAIPDRANFIMKFEKSAQELESIVKSRQGHGNTNCCIM 113
BLAST of NO02G04880 vs. NCBI_GenBank
Match: XP_008604255.1 (hypothetical protein SDRG_00551 [Saprolegnia diclina VS20] >EQC42832.1 hypothetical protein SDRG_00551 [Saprolegnia diclina VS20]) HSP 1 Score: 107.1 bits (266), Expect = 4.200e-20 Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 0 Query: 20 YSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAIL-VQRGSSRSNDCAIM 127 ++SNDYEL IK SK LE +LEH++ A G+GLHEKIS S++ LP +L R+MR+LATIRNKLIH+ F I +R+ FI +E+S +EL+ I+ +RG S C IM Sbjct: 10 HASNDYELVIKCSKELEFILEHDFSATGRGLHEKIS----SATNLPPELARQMRYLATIRNKLIHERGFDAIPDRANFIAKFEQSAKELETIVKARRGPSGDGACIIM 113
BLAST of NO02G04880 vs. NCBI_GenBank
Match: XP_012201336.1 (hypothetical protein SPRG_07151 [Saprolegnia parasitica CBS 223.65] >KDO27879.1 hypothetical protein SPRG_07151 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 106.3 bits (264), Expect = 7.100e-20 Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 0 Query: 20 YSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAIL-VQRGSSRSNDCAIM 127 +++NDYEL IK SK LE +LEH++ A G+GLHEKIS S++ LP +L R+MR+LATIRNKLIH+ F I +R+ FI +E+S +EL+ I+ +RG S C IM Sbjct: 10 HANNDYELVIKCSKELEFILEHDFSATGRGLHEKIS----SATSLPPELARQMRYLATIRNKLIHERGFDAIPDRANFIAKFEQSAKELETIVKARRGPSGDGACRIM 113
BLAST of NO02G04880 vs. NCBI_GenBank
Match: OQR83853.1 (hypothetical protein ACHHYP_14186 [Achlya hypogyna]) HSP 1 Score: 105.5 bits (262), Expect = 1.200e-19 Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 0 Query: 19 TYSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAIL-VQRGSSRSNDCAIM 127 T++SNDYEL IK SK LE++LE ++GA G+GLHEKIS SP L+R+MR+LATIRNKLIH+ F I +RS FI +E+S EL+A++ +RG+ + C IM Sbjct: 9 THASNDYELVIKCSKELEYILEADFGATGRGLHEKISSANGDFSP---QLVRQMRYLATIRNKLIHERGFDAIPDRSDFIAKFEQSAAELEALVKARRGNRGDSACRIM 114
BLAST of NO02G04880 vs. NCBI_GenBank
Match: XP_009840533.1 (hypothetical protein H257_14424 [Aphanomyces astaci] >ETV70090.1 hypothetical protein H257_14424 [Aphanomyces astaci]) HSP 1 Score: 102.1 bits (253), Expect = 1.300e-18 Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 0 Query: 20 YSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAILVQRGSSRSNDCAIM 127 +SSNDYEL IK +K LE++LE E+GA GKGLHEKIS V + LP L+++MRFLATIRNKLIH+ F +I +R FI +E + +L + +RG + SN C +M Sbjct: 10 HSSNDYELVIKCAKELEYILEAEFGAAGKGLHEKISAV---NGQLPPQLVKQMRFLATIRNKLIHERGFDRIPDRDHFILQFEAAAGDLNERVRERGGASSN-CILM 112
BLAST of NO02G04880 vs. NCBI_GenBank
Match: PSC72633.1 (hypothetical protein C2E20_3848 [Micractinium conductrix]) HSP 1 Score: 99.8 bits (247), Expect = 6.600e-18 Identity = 53/109 (48.62%), Postives = 79/109 (72.48%), Query Frame = 0 Query: 23 NDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAILVQRG----SSRSND-CAIM 127 NDYEL I++SK+LE++LE GAQGKGLHEK S VQ +P L++++R+LATIRNKL+H+ +F I +R +F+E Y+ ++RELQ ++ + G S +S+D C +M Sbjct: 29 NDYELVIRSSKDLEYILEAYLGAQGKGLHEKCSSVQQYLTPA---LVKKIRYLATIRNKLVHERQFHHIPDRPRFVENYQIAERELQQVVARHGRRPASGQSDDVCRMM 134
BLAST of NO02G04880 vs. NCBI_GenBank
Match: PRW55963.1 (hypothetical protein C2E21_5155 [Chlorella sorokiniana]) HSP 1 Score: 97.4 bits (241), Expect = 3.300e-17 Identity = 48/100 (48.00%), Postives = 73/100 (73.00%), Query Frame = 0 Query: 23 NDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAILVQRGSSRSND 123 NDYEL I+ASK+LE++LE GA+GKGLHEK + VQ +P+DL +++R+LATIRNKL+H+ F I +R +F+++Y ++++L+ IL Q G + D Sbjct: 29 NDYELVIRASKDLEYILEAYLGARGKGLHEKCTSVQ---QVIPKDLQKKIRYLATIRNKLVHERGFNHIPDRGRFVQSYLTAEQQLKDILRQHGRIKGGD 125
BLAST of NO02G04880 vs. NCBI_GenBank
Match: XP_009534692.1 (hypothetical protein PHYSODRAFT_522589 [Phytophthora sojae] >EGZ09831.1 hypothetical protein PHYSODRAFT_522589 [Phytophthora sojae]) HSP 1 Score: 91.7 bits (226), Expect = 1.800e-15 Identity = 46/99 (46.46%), Postives = 71/99 (71.72%), Query Frame = 0 Query: 17 GPTYSSNDYELAIKASKNLEHLLEHEWGAQGKGLHEKISWVQDSSSPLPEDLMRRMRFLATIRNKLIHDVEFTKIENRSKFIETYERSKRELQAILVQR 116 G YS NDY+LAI+ASK LE+LLE E+GA G+GLHE++S V+ S +P +R +R++AT+RN+LIHD + + +R KFI+ ++ + EL I+ ++ Sbjct: 9 GFVYSPNDYQLAIEASKELEYLLEKEFGAFGQGLHERVSSVE---SAIPAPTVRSIRYVATLRNRLIHDRDVRALPDRQKFIQKFDDAMVELNIIIEKK 104 The following BLAST results are available for this feature:
BLAST of NO02G04880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04880 ID=NO02G04880|Name=NO02G04880|organism=Nannochloropsis oceanica|type=gene|length=381bpback to top protein sequence of NO02G04880.1 >NO02G04880.1-protein ID=NO02G04880.1-protein|Name=NO02G04880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=127bpback to top Synonyms
Publications
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