NO02G04870, NO02G04870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04870 vs. NCBI_GenBank
Match: EWM30188.1 (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 [Nannochloropsis gaditana]) HSP 1 Score: 290.0 bits (741), Expect = 7.600e-75 Identity = 150/232 (64.66%), Postives = 175/232 (75.43%), Query Frame = 0 Query: 1 MWGRVKELFRIPKLA-GIGAEKAPLPILAANTLGAGGTPTKLKWTVLTDCSIGGKSKGSFEVLPAGDAAEEEEDVGGGAMTKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSYIQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKVEGRP 232 M +KELFRIP L G+ KAPLPIL+ L + +KLKW+V TD SIGGKS+ SFEV G+ E D G E R P A FSG LS +RP+ DP VKRTGY A+K+ MPR+ ++E YEGLEL+VRTDGR+Y+TNLEV+SFFPDELYQGYITGLP GQW TIQLPF+DMTLTRLGR+SYIQKELDSTF LESIGFL+ADGK GPF LEI V AVG+++ RP Sbjct: 1 MLRHIKELFRIPALQNGVAINKAPLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTG-----EIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQCRP 227
BLAST of NO02G04870 vs. NCBI_GenBank
Match: XP_005853461.1 (hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526] >EKU22898.1 hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 132.5 bits (332), Expect = 2.000e-27 Identity = 71/131 (54.20%), Postives = 87/131 (66.41%), Query Frame = 0 Query: 22 APLPILAANTLGAGGTPTKLKWTVLTDCSIGGKSKGSFEVLPAGDAAEEEEDVGGGAMTKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFP 153 APLPIL+ L + +KLKW+V TD SIGGKS+ SFEV G+ E D G E R P A FSG LS +RP+ DP VKRTGY A+K+ MPR+ ++E YEGLEL+VRTDGR+Y+TNLE P Sbjct: 335 APLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTG-----EIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEPHHILP 460
BLAST of NO02G04870 vs. NCBI_GenBank
Match: XP_012198512.1 (hypothetical protein SPRG_04716 [Saprolegnia parasitica CBS 223.65] >KDO30815.1 hypothetical protein SPRG_04716 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 118.2 bits (295), Expect = 4.000e-23 Identity = 66/186 (35.48%), Postives = 100/186 (53.76%), Query Frame = 0 Query: 43 WTVLTDCSIGGKSKGSFEVLPAGDAAEEEEDVGGGAMTKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSYIQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKVE 229 W V +D +IGG+S SFE +P D +++E ++ AVFSG+LS + V R+GY A++ +PR L + YEGL + ++TDGR Y N + D + P +LY G++ PA +W +L F D LT G + +L +IG +AD K GPF++ I + AV KV+ Sbjct: 49 WLVSSDRAIGGESTCSFEFVPTADDSDKEAP-----------KVGAAVFSGRLSLSVQPTEQHVVRSGYCAIRGNVPRGLHLHGYEGLAMRIKTDGRTYRINAQADGWNPHDLYMGFLKA-PANKWVEAELAFSDFILTSRGYVQVDDPAKLDPSSLRTIGIALADDKEGPFQISIEWIKAVEKVD 222
BLAST of NO02G04870 vs. NCBI_GenBank
Match: XP_008611674.1 (hypothetical protein SDRG_07607 [Saprolegnia diclina VS20] >EQC34802.1 hypothetical protein SDRG_07607 [Saprolegnia diclina VS20]) HSP 1 Score: 117.1 bits (292), Expect = 8.800e-23 Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 0 Query: 43 WTVLTDCSIGGKSKGSFEVLPAGDAAEEEEDVGGGAMTKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSYIQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKVE 229 W + +D +IGG+S +FE +P D +E K ++ AVFSG+LS + V R+GY A++ +PR L + YEGL + ++TDGR Y N + D + P +LY G++ PA +W +L F D LT G + +L +IG +AD K GPF+ I + AV KV+ Sbjct: 49 WLISSDRAIGGESTCAFEFVPTADDSE-----------KDSPKVGAAVFSGRLSLSVQPTEQHVVRSGYCAIRGNVPRGLHLHGYEGLAMRIKTDGRTYRINAQADGWNPHDLYMGFLKA-PANEWVEAELAFSDFILTSRGYVQVDDPAKLDPSSLRTIGIALADDKEGPFKFAIEWIKAVEKVD 222
BLAST of NO02G04870 vs. NCBI_GenBank
Match: OWZ08007.1 (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 [Phytophthora megakarya]) HSP 1 Score: 115.5 bits (288), Expect = 2.600e-22 Identity = 71/189 (37.57%), Postives = 106/189 (56.08%), Query Frame = 0 Query: 43 WTVLTDCSIGGKSK---GSFEVLPAGDAAEEEEDVGGGAMTKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSY-IQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKV 228 WT +D SIGG S+ G ++ +A +E+ K + +P AVFSG+LS + V R+GY AV+ +P+ L + YEG+ + + TDGR Y N++++S+ P LY G+I PA +W I LPFRD LT G + + ELD + L+S+GF +AD K G F L I + AV ++ Sbjct: 46 WTASSDRSIGGLSECQWGFYKGTKEQEATKEKPSTRLIHYVKNQDNVPSAVFSGRLSMDCQPTEVGVVRSGYCAVRASVPQELLLHGYEGITMRIMTDGREYRMNVQMESWNPFNLYMGFIR-TPANEWVDITLPFRDFLLTAKGFVKLDDETELDPS-KLKSVGFAIADQKEGEFELRIQWIKAVAQL 232
BLAST of NO02G04870 vs. NCBI_GenBank
Match: GAY00010.1 (Hypothetical protein PINS_007853 [Pythium insidiosum]) HSP 1 Score: 112.1 bits (279), Expect = 2.800e-21 Identity = 69/192 (35.94%), Postives = 94/192 (48.96%), Query Frame = 0 Query: 43 WTVLTDCSIGGKSKGSFEVLPAGDAAEEEEDVGGGAMTKTERR----IPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSYIQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKVEGR 231 W +D SIGG S+ + AA + G A + P AVFSG+LS + V R+GY AV+ +PR + + YEGL + V TDGR Y N ++D + P LY G+I P +W ++LPFRD LT G Y L SIG +AD K G F + + + A+ KVE R Sbjct: 46 WVASSDRSIGGLSECRWRFYDPKKAAASRDSSGSAAEPTVQVNQADDQPSAVFSGRLSLACQPTEVGVVRSGYCAVRGSIPRDMLLHGYEGLTMRVMTDGREYRLNAQMDGWNPLNLYMGFIR-TPPNEWVDVELPFRDFLLTTKGYYKYDDPTPLDPGKLRSIGIAIADQKEGDFEIRVQWIKAIAKVESR 236
BLAST of NO02G04870 vs. NCBI_GenBank
Match: XP_008896918.1 (hypothetical protein PPTG_05171 [Phytophthora parasitica INRA-310] >ETN17349.1 hypothetical protein PPTG_05171 [Phytophthora parasitica INRA-310]) HSP 1 Score: 108.6 bits (270), Expect = 3.100e-20 Identity = 67/190 (35.26%), Postives = 101/190 (53.16%), Query Frame = 0 Query: 43 WTVLTDCSIGGKSKGSFEVLPAGDAAEEEEDVGGGAM----TKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSY-IQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKV 228 WT +D SIGG S+ + E ED K + +P AVF+G+LS + V R+GY AV+ +P+ L + YEG+ + + TDGR Y N++++S+ P L+ G+I P +W + LPFRD LT G + + ELD + L+S+GF +AD K G F L I + AV ++ Sbjct: 46 WTASSDRSIGGLSECKWGFYKGEQTEETTEDEQTSKRLIHHVKNQDNVPSAVFTGRLSMDCQPTEVGVVRSGYCAVRASVPQELLLHGYEGIAMRIMTDGREYRMNVQMESWNPFNLHMGFIR-TPPNEWVDVTLPFRDFLLTAKGFVKLGDETELDPS-KLKSVGFAIADQKEGDFELRIQWIKAVAQL 233
BLAST of NO02G04870 vs. NCBI_GenBank
Match: POM64088.1 (Complex I intermediate-associated protein 30, mitochondrial precursor [Phytophthora palmivora var. palmivora]) HSP 1 Score: 108.6 bits (270), Expect = 3.100e-20 Identity = 67/189 (35.45%), Postives = 101/189 (53.44%), Query Frame = 0 Query: 43 WTVLTDCSIGGKSK---GSFEVLPAGDAAEEEEDVGGGA-MTKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSYIQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKV 228 WT +D SIGG S+ G ++ + EEE+ K +P AVF+G+LS + V R+GY AV+ +P+ L + YEG+ + + TDGR Y N++++S+ P LY G+I P +W I LPFRD LT G + + + L+S+GF +AD K G F L I + AV ++ Sbjct: 46 WTASSDRSIGGLSECKWGFYKGTEEKETTEEEKTSKRLIHQVKNLDNVPSAVFTGRLSMDCQPTEVGVVRSGYCAVRASVPQDLLLHGYEGITMRIMTDGREYRMNVQMESWNPFNLYMGFIR-TPPNEWVDITLPFRDFLLTAKGFVKLDDETVLDPSKLKSVGFAIADQKEGDFELRIQWIKAVAQL 233
BLAST of NO02G04870 vs. NCBI_GenBank
Match: KUF83950.1 (complex I intermediate-associated protein 30 [Phytophthora nicotianae]) HSP 1 Score: 108.2 bits (269), Expect = 4.100e-20 Identity = 68/190 (35.79%), Postives = 104/190 (54.74%), Query Frame = 0 Query: 43 WTVLTDCSIGGKS--KGSFEVLPAGDAAEEEEDVGGGAM--TKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSY-IQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKV 228 WT +D SIGG S K F + E+E + + K + +P AVF+G+LS + V R+GY AV+ +P+ L + YEG+ + + TDGR Y N++++S+ P L+ G+I P +W + LPFRD LT G + + ELD + L+S+GF +AD K G F L I + AV ++ Sbjct: 46 WTASSDRSIGGLSECKWGFYKGEQTEETTEDEQISKRLIHHVKNQDNVPSAVFTGRLSMDCQPTEVGVVRSGYCAVRASVPQELLLHGYEGIAMRIMTDGREYRMNVQMESWNPFXLHMGFIR-TPPNEWVDVTLPFRDFLLTAKGFVKLGDETELDPS-KLKSVGFAIADQKEGDFELRIQWIKAVAQL 233
BLAST of NO02G04870 vs. NCBI_GenBank
Match: POM66493.1 (Complex I intermediate-associated protein 30, mitochondrial precursor [Phytophthora palmivora var. palmivora]) HSP 1 Score: 108.2 bits (269), Expect = 4.100e-20 Identity = 70/190 (36.84%), Postives = 104/190 (54.74%), Query Frame = 0 Query: 43 WTVLTDCSIGGKSK---GSFEVLPAGDAAEEEEDVGGGA-MTKTERRIPLAVFSGQLSTLRPSMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVDSFFPDELYQGYITGLPAGQWWTIQLPFRDMTLTRLGRLSY-IQKELDSTFALESIGFLVADGKPGPFRLEIGGVNAVGKV 228 WT +D SIGG S+ G ++ + EEE+ K +P AVF+G+LS + V R+GY AV+ +P+ L + YEG+ + + TDGR Y N++++S+ P LY G+I P +W I LPFRD LT G + + ELD + L+S+GF +AD K G F L I + AV ++ Sbjct: 46 WTASSDRSIGGLSECKWGFYKGTEEKETTEEEKTSKRLIHQVKNLDNVPSAVFTGRLSMDCQPTEVGVVRSGYCAVRASVPQDLLLHGYEGITMRIMTDGREYRMNVQMESWNPFNLYMGFIR-TPPNEWVDITLPFRDFLLTAKGFVKLDDETELDPS-KLKSVGFAIADQKEGDFELRIQWIKAVAQL 233 The following BLAST results are available for this feature:
BLAST of NO02G04870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04870 ID=NO02G04870|Name=NO02G04870|organism=Nannochloropsis oceanica|type=gene|length=1306bpback to top protein sequence of NO02G04870.1 >NO02G04870.1-protein ID=NO02G04870.1-protein|Name=NO02G04870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bpback to top Synonyms
Publications
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