NO02G04610, NO02G04610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04610 vs. NCBI_GenBank
Match: AQX92136.1 (delta-6 fatty acid elongase [Nannochloropsis oceanica]) HSP 1 Score: 556.6 bits (1433), Expect = 4.300e-155 Identity = 275/276 (99.64%), Postives = 276/276 (100.00%), Query Frame = 0 Query: 1 MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA 277 MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNA+PVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA Sbjct: 1 MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA 276
BLAST of NO02G04610 vs. NCBI_GenBank
Match: EWM30230.1 (elongation of very long chain fatty acids [Nannochloropsis gaditana]) HSP 1 Score: 489.6 bits (1259), Expect = 6.500e-135 Identity = 239/274 (87.23%), Postives = 253/274 (92.34%), Query Frame = 0 Query: 3 AALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA 277 A LADYQKTC +L+ AIFKWADPAG M+K+PTRTWPLAGLDVALAIAA YL+ VFVGS +MK+A+PVKLYGLQFFYNISQVALCSYMCIEA IQAYRNNYT LPCEPFN TNPP+ PLLWLFY+SK+FDFADTVFIILGKKW+QLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMY YYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIY+L VGCK F QITKLYLGYILSLLVLFLNFYFK+YS KPNGKKP KKA Sbjct: 15 AGYLADYQKTCAELTDAIFKWADPAGTMLKSPTRTWPLAGLDVALAIAAAYLVFVFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKPNGKKP--KKA 286
BLAST of NO02G04610 vs. NCBI_GenBank
Match: XP_005820376.1 (hypothetical protein GUITHDRAFT_98336 [Guillardia theta CCMP2712] >EKX33396.1 hypothetical protein GUITHDRAFT_98336 [Guillardia theta CCMP2712]) HSP 1 Score: 307.8 bits (787), Expect = 3.500e-80 Identity = 150/249 (60.24%), Postives = 186/249 (74.70%), Query Frame = 0 Query: 25 DPAGAMVK-APTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKPVK--LYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKK 271 D +G +K PT+ W L A AI+A Y +V VG +M + + Y ++F YNI QV LCSYM +EA I AYR+NY +PC PF NPPIAP+LWLFY+SKV DF DT FI+LGKKW QLSFLHVYHH+TIF++YW+N+N GYDGDI+LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLT+ Q+IQF+TMN QAI+LL C+ F ++T+LYL YI+SL LFLNF+ +SY V P KK Sbjct: 26 DDSGKAIKPLPTQGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSY--VSPKSKK 272
BLAST of NO02G04610 vs. NCBI_GenBank
Match: XP_009831338.1 (hypothetical protein H257_07493 [Aphanomyces astaci] >ETV79497.1 hypothetical protein H257_07493 [Aphanomyces astaci]) HSP 1 Score: 299.7 bits (766), Expect = 9.500e-78 Identity = 146/262 (55.73%), Postives = 185/262 (70.61%), Query Frame = 0 Query: 1 MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKP-VKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSY 262 MA+AL +++ + + + WADP+G + P WPLA A AIA YL V VG+ +MK+ P + LQF YN Q+ALCSYMCIEA IQAYR+NY+ +PC FN T+P + ++WLFY+SK+ DFADT FII GKKW QLSFLHVYHH+TIF +YWLN A YDGD++LT+ILNG IHT+MYTYYF+S HTK IWWKKYLT Q+IQF+TMN QA+ ++ C+G I LYL YI SL LF++F+ SY Sbjct: 1 MASALWTEFKALTSPYESIVLDWADPSGQYKQNPMVEWPLADFSSAAAIALAYLAFVIVGTLVMKSGVPALNTSALQFVYNPIQIALCSYMCIEAGIQAYRHNYSPMPCNAFNTTSPVMGNVMWLFYISKILDFADTFFIIAGKKWKQLSFLHVYHHLTIFSIYWLNFRALYDGDVYLTIILNGFIHTIMYTYYFVSSHTKTIWWKKYLTTLQLIQFVTMNVQAVLIISKECQGPPQNIAVLYLVYIQSLFWLFMHFFITSY 262
BLAST of NO02G04610 vs. NCBI_GenBank
Match: XP_008871334.1 (hypothetical protein H310_07682 [Aphanomyces invadans] >ETW00309.1 hypothetical protein H310_07682 [Aphanomyces invadans]) HSP 1 Score: 299.3 bits (765), Expect = 1.200e-77 Identity = 147/262 (56.11%), Postives = 182/262 (69.47%), Query Frame = 0 Query: 1 MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKPV-KLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSY 262 MAAAL +++ + + + WADP+G + P WPLA A AIA YL V VG+ +MK P LQF YN Q+ALCSYMCIEA IQAYR+NY+ +PC +N T+P + ++WLFY+SK+ DFADT FII GKKW QLSFLHVYHH+TIF +YWLN A YDGDI+LT+ILNG IHT+MYTYYF+S HTK IWWKKYLT Q+IQF+TMN QA+ + CKG I +YL YI SL LF++F+ SY Sbjct: 1 MAAALWTEFKALTSPYESLVLDWADPSGQYKQNPMVDWPLADFSSAAAIALGYLAFVMVGTLVMKAGVPAFNTSALQFVYNPIQIALCSYMCIEAGIQAYRHNYSVMPCNSYNTTSPVMGNVMWLFYISKILDFADTFFIIAGKKWKQLSFLHVYHHLTIFSIYWLNFRALYDGDIYLTIILNGFIHTIMYTYYFVSAHTKTIWWKKYLTTMQLIQFVTMNVQAVMTISKECKGTPQNIAIMYLVYIQSLFWLFMHFFITSY 262
BLAST of NO02G04610 vs. NCBI_GenBank
Match: CBJ26568.1 (Fatty acid elongase [Ectocarpus siliculosus]) HSP 1 Score: 296.6 bits (758), Expect = 8.100e-77 Identity = 140/221 (63.35%), Postives = 167/221 (75.57%), Query Frame = 0 Query: 56 IVFVGSAMMKNAKPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA 277 +V VG +M + P+ Y ++F YN+ Q+ LCSYMC+EA + AYRN Y LPC PF+A NPP A LLWLFYVSKV DF DT+FI+L K W QLSFLHVYHH TIFL YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q+IQF+ M QA+YLL GC + P+I +Y GYILSLL LF FY SY+ KKP +K A Sbjct: 1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYT------KKPTAKNA 215
BLAST of NO02G04610 vs. NCBI_GenBank
Match: XP_009037003.1 (hypothetical protein AURANDRAFT_53701 [Aureococcus anophagefferens] >EGB08274.1 hypothetical protein AURANDRAFT_53701 [Aureococcus anophagefferens]) HSP 1 Score: 295.0 bits (754), Expect = 2.400e-76 Identity = 143/245 (58.37%), Postives = 177/245 (72.24%), Query Frame = 0 Query: 20 IFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKP---VKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSY 262 I WA + P + W L A++IA YL V VGS +M+ A P +KLYG+ F YNI+QV LCSYMCIEA I A R+N+ L C ++A +PP+A +LWLFY SKV DF DT FI++GKKW QLSFLHVYHH TIFL YWLNL+ YDGDI+LT++LNGAIHT+MYTYYF+SMHT+DIWWKKYLTL Q++QF MNAQAIY+ GC P++T +Y YI+SL +LFL F+ SY Sbjct: 11 IIAWALVGSDVTDEPVKGWALGSFTTAISIAGAYLAFVLVGSLIMR-AYPGDGIKLYGVAFLYNIAQVMLCSYMCIEAVIVAKRSNFN-LVCNSYDAKHPPMANVLWLFYASKVLDFVDTFFIVIGKKWKQLSFLHVYHHTTIFLFYWLNLHVNYDGDIYLTIVLNGAIHTIMYTYYFVSMHTRDIWWKKYLTLAQLVQFTCMNAQAIYMFVTGCSATPPRVTAIYFVYIISLFILFLQFFMSSY 253
BLAST of NO02G04610 vs. NCBI_GenBank
Match: AIG53905.1 (delta6-C18 elongase protein, partial [Pythium sp. BCC53698]) HSP 1 Score: 292.4 bits (747), Expect = 1.500e-75 Identity = 145/276 (52.54%), Postives = 182/276 (65.94%), Query Frame = 0 Query: 1 MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKP-VKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKK 276 MA L A Y++ + W DP+G +P +T P A A AI YL V VG+ +MK P +K LQF YN QV LCSYMC+EA IQAYRN Y+ PC +NA NP + +L++FY+SK+ DF DT FII+GKKWNQLSFLHVYHH+TIF +Y++N YD DI+ T+ILNG IHT+MY YYF+S HT+DIWWKKYLT Q++QFLTMNAQ ++ C GF P++ +YL YI SL LF+NF+ KSY KP K KK Sbjct: 1 MATELWASYKQWADETETLFLDWVDPSGGYKLSPMQTLPFADFASAFAICVAYLTFVAVGTLVMKAGVPAIKTSALQFVYNPLQVVLCSYMCVEAGIQAYRNGYSATPCNAYNAENPVMGNVLYMFYLSKILDFCDTFFIIVGKKWNQLSFLHVYHHLTIFFIYYMNFRVAYDADIYATIILNGFIHTIMYMYYFVSAHTRDIWWKKYLTAMQMVQFLTMNAQGYLMVSRECPGFPPKVPIMYLAYIQSLFWLFMNFFVKSYC-TKPRKAKADKKK 275
BLAST of NO02G04610 vs. NCBI_GenBank
Match: OQS05005.1 (elongation of very long chain fatty acids protein [Thraustotheca clavata]) HSP 1 Score: 290.8 bits (743), Expect = 4.400e-75 Identity = 138/259 (53.28%), Postives = 179/259 (69.11%), Query Frame = 0 Query: 4 ALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKPV-KLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSY 262 AL + + I +WADP+G +PT+ WP+ A A+A YL+ V VG+ +MK+ P LQF YN Q+ALCSYMCIEA IQAYR++Y+ +PC +N P + ++WLFYVSK+ DF DT FII+GKKW QLSFLHVYHH+TIF +YWLN+ YDGD++LT+ILNG IHT+MYTYYF+S HTK IWWKKYLT Q+IQF+TMN QA + C+G ++ +YL YI SL LF+NF+ +SY Sbjct: 3 ALWLQFDEIVRPYEKVILEWADPSGRYDLSPTKNWPMTDFTSAAAVALGYLVFVIVGTIIMKSGVPAFNTSALQFVYNPIQIALCSYMCIEAGIQAYRHDYSVMPCNAYNTAEPVMGNVMWLFYVSKILDFMDTFFIIVGKKWKQLSFLHVYHHLTIFSIYWLNIRVLYDGDVYLTIILNGFIHTIMYTYYFVSAHTKTIWWKKYLTTMQLIQFITMNVQAYMTISKKCEGAPMNVSIMYLVYIQSLFWLFMNFFVQSY 261
BLAST of NO02G04610 vs. NCBI_GenBank
Match: BAO27783.1 (delta6 poly unsaturated enlongase-b [Fistulifera solaris] >GAX26785.1 elongation of very long chain fatty acids protein 4 [Fistulifera solaris]) HSP 1 Score: 290.0 bits (741), Expect = 7.600e-75 Identity = 149/279 (53.41%), Postives = 189/279 (67.74%), Query Frame = 0 Query: 4 ALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAKP-VKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTK--------DIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVS 274 +L +Y T + +I KW+DP + T WPLA AL+IA Y + V +GSA+MK P ++LY L+F YN+SQ+ LC+YM +EA AYRN YT PC ++ NPP+A LLWLFY+SKV+DF DT+FI+ GKKW QLSFLHVYHH+TIFL YWLN + YDGD++LTV+LNG IHTVMYTYYF+ MHTK IWWK LT+ Q+IQF+TM +Q YLL CK S ++ Y+ YILSL VLF F+ +SY VKP+ KK S Sbjct: 2 SLADNYIATLDSVGESILKWSDPEN-QFRGYTNDWPLARFSTALSIALAYFLFVVLGSAIMKLGVPAMELYPLKFVYNVSQIMLCAYMTLEALFLAYRNGYTVTPCVGYDQMNPPVANLLWLFYISKVWDFWDTIFIVTGKKWRQLSFLHVYHHITIFLFYWLNSHVNYDGDVYLTVLLNGFIHTVMYTYYFICMHTKVPETGKSLPIWWKSSLTMMQMIQFITMMSQGSYLLVTQCKTTSLRVVACYIVYILSLFVLFAQFFVQSY--VKPSKKKKQS 277 The following BLAST results are available for this feature:
BLAST of NO02G04610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04610 ID=NO02G04610|Name=NO02G04610|organism=Nannochloropsis oceanica|type=gene|length=1932bpback to top protein sequence of NO02G04610.1 >NO02G04610.1-protein ID=NO02G04610.1-protein|Name=NO02G04610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top Synonyms
Publications
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