NO02G04510, NO02G04510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04510 vs. NCBI_GenBank
Match: EWM30342.1 (TRAM, LAG1 and CLN8 lipid-sensing domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 359.4 bits (921), Expect = 1.300e-95 Identity = 174/259 (67.18%), Postives = 207/259 (79.92%), Query Frame = 0 Query: 16 LVSIEPLDVATKTFVSFLLVSIVFFALFVIAPTNSKKTVKLQASWALKAVSVVHAVVVAGASVWSLLCEPGIHEITTGVFQLNADAVRGPLIHARSDVLAAAAPLTLAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLPHNLWAISVSTPHSADSGLPLLVRVASRALVLPNVLNLYWGYLMFKGLAAVIF 275 L S +PLDV K VSFLLVS VF+ F++ K +L+ASWALKA+SVVHA VVA S+W+L E +HEITTG+ Q +A +VR PL+HARSDV+A AAPLTLAYFLFDL L+PVWEGR AQ I +FLHHG+S++TWP G+CHPACH+FLLCCLSMEFSTPFVQYRWFI+QS+ GK+HPLY+ NG+IMT+AF CRL PMLP N+WAI VS PHSA+SGLP VR AS LVLPN+LN YWGY+M KGL V+F Sbjct: 3 LTSTKPLDVLGKVIVSFLLVSAVFYGFFLLDIVGLKNK-RLRASWALKALSVVHATVVATMSIWALFYEKNMHEITTGILQRDAASVRWPLVHARSDVVAVAAPLTLAYFLFDLALIPVWEGRFAQQILIFLHHGISIVTWPFGICHPACHYFLLCCLSMEFSTPFVQYRWFILQSEDLGKNHPLYIFNGIIMTIAFALCRLCPMLPLNIWAILVSAPHSAESGLPWTVRAASSVLVLPNLLNAYWGYIMIKGLTKVLF 260
BLAST of NO02G04510 vs. NCBI_GenBank
Match: XP_013897317.1 (hypothetical protein MNEG_9666 [Monoraphidium neglectum] >KIY98297.1 hypothetical protein MNEG_9666 [Monoraphidium neglectum]) HSP 1 Score: 85.1 bits (209), Expect = 4.900e-13 Identity = 78/233 (33.48%), Postives = 110/233 (47.21%), Query Frame = 0 Query: 47 PTNSKKTVKLQASWALKAVSVVHAVVVAGASVWSLLCEPGIHEITTGVFQLNADAVRG-PLIHARSDVLAAAAPLTLAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLP--HNLWAISVSTPHSADSG--LPLLVR-VASRALVLPNVLNLYWGYLMFKGLAAVI 274 P+ + T + Q W + S VHAVVV S LC + ++ +G F A A G P + + V AA +L YF D +V E + P+ +HH L+LL+ + A H ++L L E +TPFV RW + ++ R LYL NGL MT +GACR+ P H++WA H DS +P R V L VLNL W M +G A ++ Sbjct: 40 PSYRRLTHEKQIDWNTRLPSTVHAVVV------SALC---LQQLLSGAFGAAASAADGVPAVLRATPVSWAAVGTSLGYFSADFFMVLSQEALYSG--PILVHHLLALLSLYTAIDTRAAHVYVLFGLFTEVTTPFVNLRWRLHEAGRAA--GRLYLWNGLAMTAVWGACRVAAFGPLFHHVWA------HYGDSQRFMPAYARWVLLGVPALLFVLNLLWFNKMVQGAAKLV 253
BLAST of NO02G04510 vs. NCBI_GenBank
Match: KYR01785.1 (hypothetical protein DLAC_01797 [Tieghemostelium lacteum]) HSP 1 Score: 79.3 bits (194), Expect = 2.700e-11 Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 0 Query: 124 YFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLPHNLWAISVSTPHSADSGLPLLVRVASR-ALVLPNVLNLYWGYLMFKGLAAVIFGS 277 YFL+D LLV + L + +F HH L L + +G+ CHF L+ + E +TPFV +RW + Q++R KD LY++NGL + L F R+ +P ++ + + LP V + VL N+LN++W +L+++GL + F S Sbjct: 114 YFLYDTLLVCYYR-NLFDYGTLF-HHVLGLYLYNIGIVCGNCHFVLISYIFTEITTPFVNFRWILYQTNR--KDGLLYMINGLCLALGFLIVRVI-YIPLSI-GYQLYDKYPLSFALPEFVWYGTYFGFVLINLLNMFWAFLIWRGLIRLAFSS 261
BLAST of NO02G04510 vs. NCBI_GenBank
Match: XP_020434108.1 (TRAM [Heterostelium album PN500] >EFA81991.1 TRAM [Heterostelium album PN500]) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-10 Identity = 46/149 (30.87%), Postives = 80/149 (53.69%), Query Frame = 0 Query: 122 LAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLPHNLWAISVSTPHSADSGLPLLVRVAS-RALVLPNVLNLYWGYLMFKGL 270 L YF +D +++ + ++ +HH + LL + +G+ CHF L+ + E STPFV +RWF+ ++++ KD +Y++NGL+M L F R+ + ++ T + LP + + V N LN+YW YL+F+GL Sbjct: 95 LGYFFYDTIILLINHSQIDS--ATLMHHLMGLLLYYLGISRKYCHFVLVSYMLTEVSTPFVNFRWFLYRTNK-SKDF-IYIINGLLMALGFLLARV--LYAPTTIGYALITKYPLSLNLPGYIWWGTYLGCVAINSLNMYWAYLIFRGL 237
BLAST of NO02G04510 vs. NCBI_GenBank
Match: KYQ89901.1 (hypothetical protein DLAC_08466 [Tieghemostelium lacteum]) HSP 1 Score: 74.3 bits (181), Expect = 8.600e-10 Identity = 69/253 (27.27%), Postives = 118/253 (46.64%), Query Frame = 0 Query: 29 FVSFLLVSIVFFA----LFVIAPTNSKKTVKLQASWALKAVSVVHAVVVAGASVWSLLCEPGIHEITTGVFQLNADAVRGPLIHARSDVLAAAAPLTLAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLPHNLWAISVSTPHSADSGLPLLVRVASR-ALVLPNVLNLYWGYLMFKGLAAVIFGS 277 F S ++SI+F+ LF N K K Q + + VS V+AV+ + +++ L E ++ T + + + + Y ++DL L+ + L +HH L+L+ + +GL + L+ + E +TPFV YRW + + R K++ +YLVNG +M + F R+ +P ++++ + H L L R AL++ NVLN YW YL++KG I GS Sbjct: 4 FNSIEIISIIFYTCNYLLFDKYLHNDKLNSKQQVEYISRIVSNVNAVITSILAIYCLHFEKQVYFQTP--------------MKGTTSIGIFLIQFIIGYMIYDLSLIFYFRSILLD-FGSLIHHALTLIIFNLGLISGNINVILILFILTEITTPFVNYRWILYNTGR--KENVVYLVNGALMAIGFLVVRVL-YVPIMVFSM-LQKHHDEFQTLGALERNCYYFALMIINVLNAYWSYLIWKGFIKAIVGS 237
BLAST of NO02G04510 vs. NCBI_GenBank
Match: XP_022037226.1 (transmembrane protein 56-like isoform X1 [Helianthus annuus] >OTG24207.1 putative TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Helianthus annuus]) HSP 1 Score: 70.5 bits (171), Expect = 1.200e-8 Identity = 70/243 (28.81%), Postives = 111/243 (45.68%), Query Frame = 0 Query: 34 LVSIVFFALFVIAPTNSKKTVKLQ----ASWALKAVSVVHAVVVAGASVWSLLCEPGIHEITTGVFQLNADAVRGPLIHARSDVLA-AAAPLTLAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACR--LYPMLPHNLWAISVSTPHSADSGLPLLVRVASRALVLPNVLNLYWGYLMFKGL 270 + IV+ +I P K + L+ W + S HA+VVA S++ L+ + L + R I RS L+ A +++ YFL DL+++ +W FLHHGLSLL L F++L L E +TPFV RW++ S + K+ LY++NG+ + + A R L+ +++A G V + AL L +NL+W + +FKGL Sbjct: 31 MCKIVYELTGIITPLIYKGFITLENAQKLEWKNRGFSTFHAIVVAIGSIYLLV-----------ISDLFDEHAREEWIINRSSALSDAILGISIGYFLTDLVMI-IWTYPTLGGFEYFLHHGLSLLAIGQSLLSGQVQFYILIVLFTEITTPFVNLRWYLDVSGK--KNSKLYMLNGVALFAGWLAARVILFIFFFSHMYAHLYQVKQVYPMGYYSTVTIPP-ALAL---MNLFWFWKIFKGL 255
BLAST of NO02G04510 vs. NCBI_GenBank
Match: OLP96300.1 (hypothetical protein AK812_SmicGene21458 [Symbiodinium microadriaticum]) HSP 1 Score: 68.6 bits (166), Expect = 4.700e-8 Identity = 62/205 (30.24%), Postives = 94/205 (45.85%), Query Frame = 0 Query: 60 WALKAVSVVHAVVVAGASVWSLLCEPGIHEITTGV--FQLNADAVRGPLIHARSDVLAAAAPLTLAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLPHNLWAISVSTPHSADSGLPL-LVRVASRALVLPNVLNLYW 262 WA +S A++ ++LL E TT V F+ + D V G H+RS L P LAYF +DLL + ++ + +HHGL LL WP+ + A ++++L ++ E ST + + +G Y V G +AF R P P W++ S AD +P+ + VA L LP+ L LYW Sbjct: 45 WANLLISNSQALISGSVGAYALLYEEPFASTTTKVLRFETSIDTVHG---HSRS--LEQVLPFILAYFAYDLLNMMMFMRDKPAEKLMLMHHGLCLLIWPLSFHYRAGNYYVLYFIAAELSTSLSWTAGYFL--PLYGITGIAYYVIGTFTLIAFTTVRALPS-PWIWWSLLASQSFWAD--VPVGIYAVAMLTLPLPSPLFLYW 239
BLAST of NO02G04510 vs. NCBI_GenBank
Match: XP_004352626.1 (TRAM [Cavenderia fasciculata] >EGG16173.1 TRAM [Cavenderia fasciculata]) HSP 1 Score: 68.2 bits (165), Expect = 6.100e-8 Identity = 44/160 (27.50%), Postives = 80/160 (50.00%), Query Frame = 0 Query: 122 LAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLP------HNLWAISVSTPHSADSGLPLLVRVASRALVLPNVLNLYWGYLMFKGLAAVIFG 276 L YF++D ++ V + L IP HH ++LL + G CHF L+ + E +TP V RWF++++ + + Y+VNG++M F R+ + + ++++V+ P G + + NVLN+YW +L+++GL + G Sbjct: 225 LGYFIYDTGVILVHQSLL--DIPTLTHHLMALLLYYWGKTSLYCHFVLISFMFTEITTPCVNIRWFLLRTKK--GESKAYIVNGMMMAFGFLIARVVYITASVGGALYKHYSVAVNLPSYIFWGTYV-------GYTIINVLNVYWAFLIWRGLLRAVLG 373
BLAST of NO02G04510 vs. NCBI_GenBank
Match: XP_014783289.1 (PREDICTED: transmembrane protein 56-B-like [Octopus bimaculoides] >KOF98246.1 hypothetical protein OCBIM_22026596mg [Octopus bimaculoides]) HSP 1 Score: 67.0 bits (162), Expect = 1.400e-7 Identity = 57/214 (26.64%), Postives = 98/214 (45.79%), Query Frame = 0 Query: 60 WALKAVSVVHAVVVAGASVWSLLCEPGIHEITTGVFQLNADAVRGPLIHARSDVLAAAAPLTLAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRLYPMLPHNLWAISVSTPHSADSGLPLLVRVASRALVLPNVLNLYWGYLMFKGLAAVI 274 W + +S +HA VV+ ++LL + G+ + I + V+ + + + Y + DL+++ V + + + F HHG S+ + + +F L EFSTPFV RWF + + K L++VNG++MT+ F R+ M + SV HS + L + V V+ + +NLYW Y M G+ V+ Sbjct: 54 WNTRVISSIHAAVVSSMCAYTLLYDAGLSK---------------DPIWWDAPVVRTSCAIVVGYMVADLIIMTVHYKTIGE-VFYFFHHGASIYAYVYVMTIGVLPYFANYRLIAEFSTPFVNQRWF-LDVLGYEKKSSLFVVNGIVMTIVFFLVRVACMPLYWYKVYSVCGTHSFIT-LGHMRYVLVFTCVVLDSINLYWFYRMCAGVRKVL 249
BLAST of NO02G04510 vs. NCBI_GenBank
Match: XP_020182287.1 (transmembrane protein 56-B [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 67.0 bits (162), Expect = 1.400e-7 Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 0 Query: 60 WALKAVSVVHAVVVAGASVWSLLCEPGIHEITTGVFQLNADAVRGPLIHARSDVLAAAAPLTLAYFLFDLLLVPVWEGRLAQHIPVFLHHGLSLLTWPVGLCHPACHFFLLCCLSMEFSTPFVQYRWFIIQSDRHGKDHPLYLVNGLIMTLAFGACRL 218 W + S VHA+V A S + ++ +G+F ++ V G +I +S + + +++ YFL DL ++ +W LHHGLS+ + L H ++L L E +TPFV RW++ + + KDH LYL NGL M + + R+ Sbjct: 53 WNNRGFSTVHALVAAAVSFYLVM--------ISGLFSVD---VNGIIIDRKSWLSDSMFGVSIGYFLTDLTMI-LWHFPSLGGKEFLLHHGLSMYAICLALFSGKAHMYILMVLFTEATTPFVNLRWYLDVAGQ--KDHNLYLYNGLAMFVGWLIARI 196 The following BLAST results are available for this feature:
BLAST of NO02G04510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04510 ID=NO02G04510|Name=NO02G04510|organism=Nannochloropsis oceanica|type=gene|length=1295bpback to top protein sequence of NO02G04510.1 >NO02G04510.1-protein ID=NO02G04510.1-protein|Name=NO02G04510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=364bpback to top Synonyms
Publications
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