NO02G04450, NO02G04450 (gene) Nannochloropsis oceanica

Overview
NameNO02G04450
Unique NameNO02G04450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1623
Alignment locationchr2:1205654..1207276 +

Link to JBrowse

Properties
Property NameValue
DescriptionHippocampus abundant transcript 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1205654..1207276 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR020846MFS_dom
IPR011701MFS
IPR001958Tet-R_TetA/multi-R_MdtG
Homology
BLAST of NO02G04450 vs. NCBI_GenBank
Match: EWM30276.1 (hippocampus abundant transcript 1 [Nannochloropsis gaditana])

HSP 1 Score: 752.3 bits (1941), Expect = 1.100e-213
Identity = 433/553 (78.30%), Postives = 476/553 (86.08%), Query Frame = 0
Query:    1 MATTALTRLFAQTEAFLSAVVSSPR-----KASARPPTQTCAP-PAPTSPCTGEERRYLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLSGIFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCVGPTLGGLLAERFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQRRRQGIRLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTKLPSEAEVWEYEKRMLREEGTVEAVGLLS---XXXXXXXXXXXXXXXXXXXXXXPEGHLP----KITPAAPTAQAVPAAPLPNTKKDPPVELKHFVSV 541
            M+T+   +L A++EAF S+VVSSP+       +    T+T  P PA +SPCT +ERRYLYVLPVLF EYLALSLSRAL+PGLM + F N+TY VLG++ET KGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPI SLALTQSMWIYAVAQGLSG+FASTFTITFAYIADLVHKERRSSAYGLALATFGLSYC+GP LGG LAERFSYR VFA+SVA V LAVAYIVLILPESRST+QQR R+GIRLLAAGMPPPE+YLP+SWSPFS+LEVFSG+PLL SVSK+VFLYYTGVWAIVSTLMVHVQRSFHA+EVTLGELMS FGVCTML+EGVLVR+MVP FGEK AMQIGLAAFALQCAFF+FARHI DVLFSLLFSTLANLVYP+VSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPL+FG LMF+CQDT APGAPYLLASAC VAAL  + KLPSEAE+WEYEKR+ ++ G  EAVGLLS      XXXXXXXXXXXXXXXXXXX EGHLP    K +   P+A  + A+ L   K +P  ELK   SV
Sbjct:    1 MSTSTFAQLCARSEAFFSSVVSSPKLIPEAARATSAATRTSRPSPATSSPCTVDERRYLYVLPVLFFEYLALSLSRALLPGLMNSAFGNYTYHVLGIVETAKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPISSLALTQSMWIYAVAQGLSGVFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCLGPILGGFLAERFSYRAVFAISVAQVVLAVAYIVLILPESRSTEQQRCRRGIRLLAAGMPPPEDYLPMSWSPFSVLEVFSGEPLLRSVSKIVFLYYTGVWAIVSTLMVHVQRSFHADEVTLGELMSAFGVCTMLSEGVLVRLMVPHFGEKGAMQIGLAAFALQCAFFSFARHIHDVLFSLLFSTLANLVYPAVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLLFGSLMFLCQDTRAPGAPYLLASACSVAALLQTNKLPSEAEIWEYEKRVSKQAGLQEAVGLLSEEGPCEXXXXXXXXXXXXXXXXXXXXEGHLPKDLTKQSTTKPSASTLQASQL-GQKHEPKHELKQVCSV 552          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: CBJ26362.1 (Hippocampus abundant transcript 1 protein (Putative tetracycline transporter-like protein) [Ectocarpus siliculosus])

HSP 1 Score: 384.0 bits (985), Expect = 7.500e-103
Identity = 209/418 (50.00%), Postives = 278/418 (66.51%), Query Frame = 0
Query:   49 ERRYLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLSGIFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCVGPTLGGLLAERFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQRRRQGI--------------RLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTKLP 453
            E RYL VLPVLF E+LAL+L R L+P LM+  +   TY V+GVI+T KG+LAF+ACP+FG+LSDV+GR+  LF+TVLGT  P+++L ++ ++WI+A A   SG FA+TF + F+YI DLV   RR+ AYGLALATFGLS+ +GP +G  +A       VF  SV L+ + + +I + LPES    ++   +G               R   A     +      W+P + L+ FSG+PLL + +K+  LYYT VWA+VSTLMV+V R F    V +G+L+S FGVCTM AEGVLVR MVP+ GEK+ +QIGL  FA QC     A     V  S+  S L+NLVYPS+SSL+SRSV  SKQGE LGA+NG+RALTEGFGPL+F  L +  +DT+ PG PYL+A+   +AAL  S ++P
Sbjct:   15 ESRYLLVLPVLFYEFLALALIRGLLPTLMLDFWGKWTYTVIGVIDTGKGLLAFVACPMFGRLSDVIGRKKCLFVTVLGTASPVIALCISNNLWIFAGAAAFSGCFAATFPLVFSYIGDLVPPRRRAPAYGLALATFGLSFSLGPAMGAYIALHHGNEAVFLCSVLLIGIDLVFIAVYLPESLGAGEELEFEGAGGEEAGGGLRKELQRSRTASYGGGDALGAFQWNPLASLKAFSGNPLLKTTAKITLLYYTSVWAVVSTLMVYVARQFQFGPVKIGQLLSAFGVCTMFAEGVLVRWMVPKLGEKLTLQIGLLGFAAQCVLLGLAHSEWMVFASMGGSLLSNLVYPSISSLISRSVATSKQGEVLGAINGVRALTEGFGPLLFSCLFWYTEDTFLPGCPYLIAAVVCLAALLLSYEIP 432          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: GAX16292.1 (hypothetical protein FisN_3Hh225 [Fistulifera solaris])

HSP 1 Score: 352.1 bits (902), Expect = 3.200e-93
Identity = 213/467 (45.61%), Postives = 281/467 (60.17%), Query Frame = 0
Query:   32 PTQTCAPPAPTSPCTGEERRYLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLAL-------------------TQSMW----------------------IYAVAQGLSGIFASTFTITFAYIADLVHK-ERRSSAYGLALATFGLSYCVGPTLGGLLAERFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQRRRQGIRLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTKLPSEAE 457
            PTQT     P+S  +  + ++LYVLPVL LE+LA++L+RA++PGL++  + ++ Y V+G  E V+G+LAF+ACP FGKLSDV+GR+  LF+TVLGT  P+  LA                      + W                      ++ +   LSGIF+STFT+ FAYI+D VH+ + R SAYGLALATFGLS+ +GP +GG LA++ + + VF  S+ L  + +AYI  ILPESR                 +   +     SW P+  L + + DP L  V +V FLYYTG+WAI+STL V+  + FH     LGELMS  G+ TMLAE VLVR+MVP  GEK AM++GL +FALQC    FA     +    +FS L NLVYPS+SSLVS SV P   GEALGA+NGI+ALTEG GPLVFG LM + + +  PG PYLLAS    AA   + +LP   E
Sbjct:    4 PTQT----LPSSSFSERKYQHLYVLPVLLLEFLAIALTRAILPGLLLQKYGDNVYLVMGCTECVRGLLAFLACPFFGKLSDVIGRKVCLFVTVLGTCAPVCVLAFFSWDTQQSPTEESSMSSSTDDNFWSSLLDPATNEVAMSAFHPNAITVFVILLALSGIFSSTFTLVFAYISDTVHRQDERVSAYGLALATFGLSFTMGPIVGGYLAQQ-NKQYVFLTSLLLTVVDLAYIYFILPESRPIDAPSSAAS----TISLMTLDHNFSSSWKPWDSLRLIATDPFLRKVGEVAFLYYTGLWAIISTLSVYAVKRFHLTPERLGELMSALGLSTMLAEAVLVRVMVPWLGEKKAMKVGLVSFALQCVVLGFATEGWHLFVCAMFSLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPDLEE 461          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: GAX15782.1 (hypothetical protein FisN_3Lh225 [Fistulifera solaris])

HSP 1 Score: 343.2 bits (879), Expect = 1.500e-90
Identity = 215/481 (44.70%), Postives = 287/481 (59.67%), Query Frame = 0
Query:   22 SSPRKASARPPTQTC--APPAPTSPCTGEER-RYLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPI-------------------LSLALTQSMW----------------------IYAVAQGLSGIFASTFTITFAYIADLVHK-ERRSSAYGLALATFGLSYCVGPTLGGLLAERFSYRTVFAVSVALVFLAVAYIVLILPESRSTK-QQRRRQGIRLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTKLPSEAE 457
            SSP + ++   T+    AP   +S    E++ ++LYVLPVL LE+LA++L+RA++PGL++  + +  Y V+G  E V+G+LAF+ACP FGKLSDV+GR+  LF+TVLGT  P+                   +S +   + W                      ++ +   LSGIF+STFT+ FAYI+D VH+ + R SAYGLALATFGLS+ +GP +GG LA++ + + VF  S+ L  + +AYI  ILPESRS          I L+       +     SW P+  L + + DP L  V +V FLYY G+WAI+STL V+  + FH     LGELMS  G+ TMLAE VLVR MVP  GEK AM++GL +F LQC    FA     +    +FS L NLVYPS+SSLVS SV P   GEALGA+NGI+ALTEG GPLVFG LM + + +  PG PYLLAS    AA   + +LP   E
Sbjct:   10 SSPFRLASNNNTRLAVNAPTQISSSSFSEQKYQHLYVLPVLLLEFLAIALTRAILPGLLLQKYGDSVYLVMGCTECVRGLLAFLACPFFGKLSDVIGRKVCLFVTVLGTCAPVCVLAFFSWDTQQQQTEESNMSTSTDDNFWSSLLDPAANEVAMSAFHPNAVTVFVILLALSGIFSSTFTLVFAYISDTVHRQDERVSAYGLALATFGLSFTMGPIVGGYLAQQ-NKQYVFLTSLLLTVVDLAYIYFILPESRSIDVPSSAASTISLMTL-----DHNFSSSWKPWDSLRLIATDPFLRKVGEVAFLYYIGLWAIISTLSVYAVKRFHLTPERLGELMSALGLSTMLAEAVLVRFMVPWLGEKKAMKVGLVSFGLQCVVLGFATEGWHLFVCAMFSLLGNLVYPSLSSLVSGSVEPDAVGEALGAINGIKALTEGIGPLVFGSLMTLSEASPLPGWPYLLASLLVFAAYRVADELPDLEE 484          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: XP_002176555.1 (transporter, major facilitator superfamily and tetracycline resistance protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51018.1 transporter, major facilitator superfamily and tetracycline resistance protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 335.5 bits (859), Expect = 3.100e-88
Identity = 190/374 (50.80%), Postives = 250/374 (66.84%), Query Frame = 0
Query:   54 YVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLSGIFASTFTITFAYIADLV-HKERRSSAYGLALATFGLSYCVGPTLGGLLAERFSYRTVFAVSVALVFLAVAYIVLILPESR-----STKQQRRRQGIRLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLM 422
            YVLPVL LE+LA++L+RA++P L++  + +  Y V+G+ + V+G+LAF ACP+FGKLSD++GRR  LF+TV+GT  P        ++ ++ V   LSGIF+STFT+ FAYI+D V  ++ R SAYGLALATFGLS+ +GP  GG LA+  + + VF  S+ L  + +AYI  ILPESR     ST     +  I L+             SW+P+  L++ + DP L  V +V FLYYTG+WA++STL V+  R FH N   LGELMS  G+CTM+AE VLVR+MVP  GEK A ++GL +FALQC    FA     +     FS L NLVYPS++SLVS SV P   GEALGA+NGI+ALTEG GPLVFG LM
Sbjct:    1 YVLPVLLLEFLAVALTRAVLPSLLLQQYGSSVYLVMGIADCVRGLLAFCACPIFGKLSDLIGRRICLFVTVMGTCAPQRDAVHPYAVTVFIVLLSLSGIFSSTFTLVFAYISDTVRQQDERVSAYGLALATFGLSFTIGPMAGGYLAQT-NKQYVFLSSLILTIVDLAYIYFILPESRIQQDGSTFDSLNKSSISLMTLDH-------NFSWNPWDTLKLITADPFLRKVGQVAFLYYTGLWALISTLSVYAVRRFHLNPERLGELMSALGLCTMVAEAVLVRVMVPLLGEKKATKVGLVSFALQCVVLGFAYEGWHLFVCAGFSLLGNLVYPSLTSLVSGSVEPDAVGEALGAVNGIKALTEGIGPLVFGSLM 366          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: OEU20786.1 (MFS general substrate transporter, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 321.2 bits (822), Expect = 6.000e-84
Identity = 189/413 (45.76%), Postives = 261/413 (63.20%), Query Frame = 0
Query:   51 RYLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLS---GIFASTFTITFAYIADLVH-KERRSSAYGLALATFGLSYCVGPTLGGLLA-ERFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQ--RRRQGIRLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTKLPSEAE 457
            ++LYVLPVL +E+LA++L+RA++P +++  + ++ Y +LG  + V+G+LAF ACPLFGKLSDV+GR+  LF+TVLG+  P+ SLA     W  A +  +S    IF+STFT+ FAYI+D VH +  R +AYGLALATFGLS+ +GP  GG LA  +  Y  VF  S+ L  L + YI +ILPES S +     + +GI               +SWSP+  + +   DP L  + +V F YYTG+WA++STL ++  + F      LGELMS  G+ TM+AE +L+R +VP  GEK  +++GL +F LQC     A     +   +  S L NLVYPS+SSLVS  V P K GEALGA+NGI+ALTEG GPL FG LM   + T  PG+PY LA      A + + KLP+ +E
Sbjct:    4 QHLYVLPVLLMEFLAIALTRAVLPSILIQQYGSNVYLILGCADCVRGVLAFFACPLFGKLSDVLGRKLCLFVTVLGSCAPVCSLAF--FTWDVAESDMISDKGSIFSSTFTLVFAYISDSVHERNERVTAYGLALATFGLSFTIGPMAGGYLANSKTDY--VFQCSLVLTLLDLLYIYMILPESISPRIDLFTKMEGIA------------NSISWSPWDSIRLVLHDPFLRKIGQVAFFYYTGLWAVLSTLSLYAVQHFKMTPQVLGELMSCLGLSTMVAEAILIRWLVPMLGEKQTIRVGLISFGLQCIVLGAANEPWQLFLCVGLSLLGNLVYPSLSSLVSGIVEPKKVGEALGAINGIKALTEGIGPLFFGTLMTFSEGTAFPGSPYWLAGILVFVAYHLADKLPANSE 400          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: XP_002290629.1 (hypothetical protein THAPSDRAFT_262480 [Thalassiosira pseudonana CCMP1335] >EED92381.1 hypothetical protein THAPSDRAFT_262480 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 307.8 bits (787), Expect = 6.800e-80
Identity = 184/410 (44.88%), Postives = 251/410 (61.22%), Query Frame = 0
Query:   52 YLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLSGIFASTFTITFAYIADLV-HKERRSSAYGLALATFGLSYCVGPTLGGLLA----ERFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQRRRQGIRLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTKLPSEAE 457
            +L VLPVL LE+L L+L+RA++P L++  + + TY V+G+ E V+GILAF ACPLFGKLSD  GRR  L +TV+GT LP+ SLA  + +        LSG+F+STFT+TFAYI+D+V  ++ R +AYGLALATFGLS+ +GP LGG LA    +      VF  ++ L  L + YI  +LPES   K+                        W+P   +   + DPLL ++ +V FLYYT + A+VSTL+++  R  H     LGELM+  G+ TM++E VLVRI +P  GEK AM++GLA+FA+QC   A A     +      +   NLVYPSVSSLVS +V P   G ALGA+NG+++LTEG GPLVFG L+ M +    PG PY +A+     A      LP + +
Sbjct:   96 HLAVLPVLLLEFLPLALTRAVLPSLLLKRYGSRTYIVMGLAECVRGILAFFACPLFGKLSDNFGRRPCLLVTVMGTLLPVCSLAFWK-VDENGEFMALSGMFSSTFTLTFAYISDVVKDRDGRVAAYGLALATFGLSFTIGPLLGGYLANVDDDGKEQHRVFITTLVLAVLDLFYIHFLLPESLHNKRASSSW-------------------WNPLDSIRYLTSDPLLSTIGRVTFLYYTALHAVVSTLILYAARQLHFGPHRLGELMAALGLSTMVSEAVLVRIAIPALGEKRAMRVGLASFAMQCVLLAVADRPWHLFGCAFLAIPGNLVYPSVSSLVSTTVRPEMVGRALGAVNGVKSLTEGVGPLVFGTLLTMSEKDALPGWPYFIAAIMAALAYQAGRALPGDED 485          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: EJK49019.1 (hypothetical protein THAOC_32147 [Thalassiosira oceanica])

HSP 1 Score: 265.0 bits (676), Expect = 5.100e-67
Identity = 186/536 (34.70%), Postives = 268/536 (50.00%), Query Frame = 0
Query:   52 YLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLAL---------------------------------------TQSMW-----------------IYAVAQGLSGIFASTFTITFAYIADLVHKER-RSSAYGLALATFGLSYCVGPTLGGLLA------ERFSYRTVFAVS-----------------------------------VALVFLAVA---YIVLILPESRSTKQ---------------QRRRQGIRLLAAGMPPPEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTKLPSEAEVWEYEKRMLREEGTV 472
            +L VLPVL LE+LAL+L+RA++P L++  + + TY ++G  E ++G+LAF ACPLFG LSD  GRR  L +TVLGT  P+ SLA                                        T S W                 ++ V   LSG+F+STFT+TFAYIAD+V  ++ R +A+GLALATFGLS+ +GP LGG LA           RTV  +S                                   V ++ LAV    YI  ILPESR +++                       LL  G        P   +P   ++  +  PLL +V KV FLYYT + A+VSTL+++  R F+     LGELM+  G+ TM++E +LVR+ +P FGE   ++ GL +F  QC   + +     +    + + + NLVYPS+SSL+S +V P   G ALGA+NG+++LTEG GPL+FG+L+ + + +  PG PYL+A+     +   +  LP E +      +M + E  V
Sbjct:   19 HLAVLPVLLLEFLALALTRAVLPSLLLKRYGSKTYVIMGSAECLRGLLAFFACPLFGVLSDSYGRRPCLLVTVLGTLAPVCSLAFLPAFDNSTAHSVTVTRLAEEDDIVHLDGLDTGDASEGGYTSSFWLGTMPPSFEAPAVHRIDVFVVLFALSGMFSSTFTLTFAYIADVVTDQKDRVAAFGLALATFGLSFTIGPLLGGYLANVDDEGRGRGGRTVMKMSHLDDNDEINDTSTVRHMDSETAHLDINPIGQHRVFVTVLILAVVDLFYINFILPESRKSQRLPVYEDGGEETTAVAATSSTANALLPGGSGVSRRASPKFLNPIHSVKYLATHPLLRTVGKVTFLYYTALHAVVSTLVLYAARQFNLGPQQLGELMASLGLSTMVSEALLVRVAIPMFGENNCIRYGLTSFFCQCLVLSLSNRPWQLYACAVLAMVGNLVYPSISSLISETVEPESIGRALGAVNGVKSLTEGIGPLIFGYLLTVSEKSSLPGWPYLVAALLVAFSYTAARDLPDEDDCEMRSSKMYQSETEV 554          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: XP_009036070.1 (hypothetical protein AURANDRAFT_37260, partial [Aureococcus anophagefferens] >EGB08937.1 hypothetical protein AURANDRAFT_37260, partial [Aureococcus anophagefferens])

HSP 1 Score: 193.4 bits (490), Expect = 1.900e-45
Identity = 105/206 (50.97%), Postives = 135/206 (65.53%), Query Frame = 0
Query:   32 PTQTCAPPAPTSPCTGEERRYLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLSGIFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCVGPTLGGLLAERFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQRR 238
            P      P    P   +   Y+++LPVLF+E+LA++++++L+P  +   F    Y V+GV ETVKGI AF+ACPLFG+LSDVVGR + L +TV+GTT P   LA T ++W Y  A GLSG+FASTFT+ FAYIAD+V   RR+ AYG ALAT GLS+ VGP LG   A R   R VF V++AL  L V  I L LPES     +RR
Sbjct:    7 PAGQVEAPRERRPVDAKPETYVFILPVLFVEFLAIAVTKSLLPARLNDFFGEEVYMVIGVAETVKGIFAFVACPLFGRLSDVVGRTSCLLVTVVGTTAPCWILAFTDNLWAYVCALGLSGLFASTFTLVFAYIADVVEATRRAPAYGAALATLGLSFTVGPVLGAFAARRVGDRRVFLVALALAILDVLIIGLALPESNEGALRRR 212          
BLAST of NO02G04450 vs. NCBI_GenBank
Match: XP_019745956.1 (PREDICTED: hippocampus abundant transcript 1 protein-like [Hippocampus comes])

HSP 1 Score: 191.4 bits (485), Expect = 7.100e-45
Identity = 128/427 (29.98%), Postives = 215/427 (50.35%), Query Frame = 0
Query:   54 YVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILAFMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLSGIFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCVGPTLGGLLAERFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQRRRQGIRLLAAGMPPPEEYLPLSW---SPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQRSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFALQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALGAMNGIRALTEGFGPLVFGFLMFM-----------------------CQDTWAPGAPYLLASACGVAALYYSTKLPSE 455
            + + V+FLE+ A  L    M  ++  TF  HT+ + G+I+ VKG+L+FM+ PL G LSDV GRR+ L +TV  T  PI  + L  S W Y     +SG F+ TF++ FAY+AD+  +  RS+AYGL  ATF  S    P +G  L+  +    V  V+  +  + + +I+L +PES   K +    G               P+SW    PF+ L     DP +L +   VFL Y       S+  +++++  + +  T+   + + G+ +++A+ +++ +++   G K  + +GL    LQ A++ F      +  +   + ++++ +P+VS+LVS+S  P KQG A G + GIR L  G GP ++GF+ F+                        + T  PG P+LL +   V A   +  +P +
Sbjct:   77 HAVVVIFLEFFAWGLLTTPMLTVLHETFPQHTFLMNGLIQGVKGLLSFMSAPLIGALSDVWGRRSFLLVTVFFTCAPIPLMRL--SPWWYFAMISMSGAFSVTFSVIFAYVADVTDERERSTAYGLVSATFAASLVTSPAIGAYLSAWYGDNLVVLVATLIALVDICFILLAVPESLPDKMRLNTWG--------------APISWEQADPFASLRKVGQDPTVLLICITVFLSYLPEAGQYSSFFLYLRQVVNFSSTTIAVFIGVVGILSIVAQTLVLTLLMRTLGNKNTVLLGLGFQILQLAWYGFGSEPWMMWAAGAVAAMSSITFPAVSALVSQSADPDKQGVAQGMITGIRGLCNGLGPALYGFIFFLFNVELNTMDPIQGDFDPLPLHSPTEQTLIPGPPFLLGACTVVVAFLVALFIPEK 487          
The following BLAST results are available for this feature:
BLAST of NO02G04450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30276.11.100e-21378.30hippocampus abundant transcript 1 [Nannochloropsis... [more]
CBJ26362.17.500e-10350.00Hippocampus abundant transcript 1 protein (Putativ... [more]
GAX16292.13.200e-9345.61hypothetical protein FisN_3Hh225 [Fistulifera sola... [more]
GAX15782.11.500e-9044.70hypothetical protein FisN_3Lh225 [Fistulifera sola... [more]
XP_002176555.13.100e-8850.80transporter, major facilitator superfamily and tet... [more]
OEU20786.16.000e-8445.76MFS general substrate transporter, partial [Fragil... [more]
XP_002290629.16.800e-8044.88hypothetical protein THAPSDRAFT_262480 [Thalassios... [more]
EJK49019.15.100e-6734.70hypothetical protein THAOC_32147 [Thalassiosira oc... [more]
XP_009036070.11.900e-4550.97hypothetical protein AURANDRAFT_37260, partial [Au... [more]
XP_019745956.17.100e-4529.98PREDICTED: hippocampus abundant transcript 1 prote... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007112NSK007112Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04450.1NO02G04450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624671gene_1036Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g31gene434Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04450.1NO02G04450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04450 ID=NO02G04450|Name=NO02G04450|organism=Nannochloropsis oceanica|type=gene|length=1623bp
ATGGCCACGACCGCTTTAACCAGGCTGTTCGCTCAGACGGAAGCCTTCCT
ATCGGCCGTGGTCTCTTCCCCCAGGAAGGCGAGCGCGCGTCCACCTACCC
AAACCTGCGCCCCTCCTGCCCCAACCAGCCCGTGCACAGGCGAGGAACGA
CGATACTTGTACGTGCTGCCTGTACTGTTCCTAGAGTACTTGGCACTGAG
TTTAAGCCGGGCATTGATGCCGGGTCTGATGGTAGCCACATTTAGCAACC
ACACGTACTTCGTCCTGGGTGTCATTGAAACCGTCAAAGGAATCTTGGCT
TTCATGGCCTGTCCCCTTTTTGGGAAGCTCAGTGATGTAGTGGGAAGGCG
GACAGGACTTTTTATAACGGTGCTGGGAACGACTTTGCCAATTTTGAGTT
TGGCATTGACGCAGAGCATGTGGATTTACGCCGTTGCCCAGGGATTGAGC
GGCATCTTTGCCTCGACATTCACCATTACCTTTGCTTACATTGCAGACTT
AGTCCACAAGGAGAGACGTTCTTCAGCCTACGGCTTAGCGTTAGCAACAT
TTGGATTATCGTATTGCGTGGGCCCAACCCTAGGGGGGCTCCTGGCGGAA
CGCTTTTCTTATCGGACAGTGTTCGCCGTGTCGGTGGCTTTGGTCTTTTT
AGCTGTCGCATACATCGTCTTGATCCTCCCTGAATCCCGCTCAACAAAGC
AGCAACGTCGTCGGCAGGGCATTCGACTATTGGCTGCTGGCATGCCGCCG
CCGGAAGAGTACTTGCCTTTGTCCTGGAGCCCCTTCTCGATCCTTGAGGT
GTTCTCCGGGGATCCATTGTTATTGAGTGTGAGCAAGGTGGTCTTCTTGT
ACTATACCGGTGTGTGGGCTATCGTTTCCACGTTGATGGTCCACGTCCAG
AGGTCATTCCATGCGAATGAAGTGACCTTGGGGGAGTTAATGTCGATGTT
TGGGGTGTGCACGATGCTGGCTGAGGGAGTCCTAGTCAGGATTATGGTGC
CGCAATTCGGGGAGAAAATTGCCATGCAAATCGGCCTGGCGGCCTTTGCC
TTGCAATGCGCTTTTTTCGCATTCGCTCGGCATATACAGGATGTGTTGTT
CTCCCTCTTGTTTTCGACATTGGCGAATTTGGTGTATCCGTCAGTATCGT
CTTTGGTCTCGAGAAGTGTTCCGCCTAGTAAGCAGGGGGAGGCCTTGGGA
GCCATGAATGGAATTAGGGCATTGACTGAAGGATTCGGTCCGCTGGTGTT
TGGGTTTTTAATGTTCATGTGTCAGGATACCTGGGCTCCAGGAGCTCCGT
ATTTGTTGGCGAGCGCTTGTGGTGTGGCTGCGCTTTATTATTCGACCAAA
TTACCCAGTGAGGCGGAGGTGTGGGAGTATGAGAAAAGAATGCTGAGGGA
GGAGGGCACGGTGGAGGCCGTGGGGCTGTTGTCGGAGGAAGGACAACAGG
AGGAGGAAGAGGGAGGGGAAGAGGAAGAGAGTGAAAGGGAGCAACAAAAT
CCGGAGGGACATTTGCCCAAAATTACACCGGCGGCACCGACAGCACAAGC
TGTACCAGCTGCACCGCTGCCGAACACGAAAAAGGATCCTCCAGTGGAAC
TAAAACATTTTGTGTCCGTTTAG
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protein sequence of NO02G04450.1

>NO02G04450.1-protein ID=NO02G04450.1-protein|Name=NO02G04450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp
MATTALTRLFAQTEAFLSAVVSSPRKASARPPTQTCAPPAPTSPCTGEER
RYLYVLPVLFLEYLALSLSRALMPGLMVATFSNHTYFVLGVIETVKGILA
FMACPLFGKLSDVVGRRTGLFITVLGTTLPILSLALTQSMWIYAVAQGLS
GIFASTFTITFAYIADLVHKERRSSAYGLALATFGLSYCVGPTLGGLLAE
RFSYRTVFAVSVALVFLAVAYIVLILPESRSTKQQRRRQGIRLLAAGMPP
PEEYLPLSWSPFSILEVFSGDPLLLSVSKVVFLYYTGVWAIVSTLMVHVQ
RSFHANEVTLGELMSMFGVCTMLAEGVLVRIMVPQFGEKIAMQIGLAAFA
LQCAFFAFARHIQDVLFSLLFSTLANLVYPSVSSLVSRSVPPSKQGEALG
AMNGIRALTEGFGPLVFGFLMFMCQDTWAPGAPYLLASACGVAALYYSTK
LPSEAEVWEYEKRMLREEGTVEAVGLLSEEGQQEEEEGGEEEESEREQQN
PEGHLPKITPAAPTAQAVPAAPLPNTKKDPPVELKHFVSV*
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Synonyms
Publications