NO02G04410, NO02G04410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04410 vs. NCBI_GenBank
Match: EWM30303.1 (scavenger receptor class b member 1 [Nannochloropsis gaditana]) HSP 1 Score: 1052.7 bits (2721), Expect = 4.800e-304 Identity = 506/694 (72.91%), Postives = 583/694 (84.01%), Query Frame = 0 Query: 1 MGRYDEDDTREAASKAEYSSLKDAINLNDDVYALPDRTSFFASRPLCGMWGGPRVWAIRRPSDRCGIILISIALVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGDSVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVVTFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQENLPMGLCNLTLMGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERLHFPSLSRWQAGGLATMLKMTLNEREGRCMREEVTWDFGLPEAGGRDGEAVEAEWMRMLFLPMVIYDESFQMSPSFTSDFKHQVLGSVSVAKTTQVAGPLFAVVLLLVGVLVMVRGRRKERELAERRTQRYSTMQEGDILV 695 MGRYDED+ A + EYSS KDA++ D + P+R SF RP+CG+WGGPRVW IRR SDR G++LIS+A+VLG+LTACGP+IVD+LV GIDAQTVLKG GKA+ TFV+SG+N+GVEI+Y+L YLNLTNPTE+L GTA ARLEEVGPFVYRQ+R+KLN+TFA DGETVSF+L+KTY+FDE ANA TGLVDT +TTVHPVIQVLQGQL+NTLN L E++ P A GWLAP RR++ER+I+ASGLWKAVYKLVLCQGNPMGVSPFT Q+ARDLYWGYH DSVL MQ LV AI+ LA ++ K ++LPV+PEAFPGLQPNLTSEAET RRIGPN+VYTGQG TKARLQ YTMFQNMT V ACPDPTTG P EMP+CD+YQA+W NRSA RHGY+PQWGS AAN+VRGTDGSLFAHPLTG++TVVTFQEDYRRW+EMVY+GEV DFHG+ LRRYVFSQ+DFRNDS M++D+YQ+NLP GL NLTLMGGFPL+LSKPH LEA+P VQ+AVEGL PDPE HLTFIDAEERSGVTFRTHKRVQLNAGL+RL FPSLSR +A LAT+L+ LNE E RC+REEVTWDFGLP G MLFLPMV YDE F+M SF DFK QVLGS S AKT QVAGPLFAV+L L+GV++++RGRR E+ELA RRT RYST+ EGDI+V Sbjct: 1 MGRYDEDNAHAEAKRVEYSSFKDALDDGDSFFGSPERASFCVRRPMCGVWGGPRVWCIRRASDRWGVLLISVAVVLGVLTACGPLIVDRLVAQGIDAQTVLKGASGKAYKTFVDSGENLGVEIYYSLHYLNLTNPTELLEGTALARLEEVGPFVYRQHRHKLNLTFASDGETVSFVLQKTYVFDEDANAATGLVDTDVRVTTVHPVIQVLQGQLQNTLNAQLKEIIHP-AIGWLAPLRRAIEREIDASGLWKAVYKLVLCQGNPMGVSPFTVQSARDLYWGYHNDSVLLTMQALVGAIDELAKRVGKRVSLPVIPEAFPGLQPNLTSEAETARRIGPNVVYTGQGKTKARLQGYTMFQNMTQVHACPDPTTGDAPAPGEMPACDIYQADWTNRSAVRHGYLPQWGSAAANEVRGTDGSLFAHPLTGQETVVTFQEDYRRWIEMVYVGEVHDFHGVSLRRYVFSQKDFRNDSVMSADWYQDNLPTGLSNLTLMGGFPLFLSKPHFLEADPSVQQAVEGLDPDPESHLTFIDAEERSGVTFRTHKRVQLNAGLKRLRFPSLSRIEASSLATILQRDLNEAETRCVREEVTWDFGLPAEGDE----------HMLFLPMVRYDEGFEMPASFVKDFKKQVLGSTSAAKTVQVAGPLFAVLLALIGVIIIMRGRRNEQELARRRTHRYSTIHEGDIMV 683
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_005855019.1 (scavenger receptor class B, member 1, partial [Nannochloropsis gaditana CCMP526] >EKU21341.1 scavenger receptor class B, member 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 558.5 bits (1438), Expect = 2.900e-155 Identity = 271/364 (74.45%), Postives = 304/364 (83.52%), Query Frame = 0 Query: 331 TFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVVTFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQENLPMGLCNLTLMGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERLHFPSLSRWQAGGLATMLKMTLNEREGRCMREEVTWDFGLPEAGGRDGEAVEAEWMRMLFLPMVIYDESFQMSPSFTSDFKHQVLGSVSVAKTTQVAGPLFAVVLLLVGVLVMVRGRRKERELAERRTQRYSTMQEGDILV 695 T RRIGPN+VYTGQG TKARLQ YTMFQNMT V ACPDPTTG P EMP+CD+YQA+W NRSA RHGY+PQWGS AAN+VRGTDGSLFAHPLTG++TVVTFQEDYRRW+EMVY+GEV DFHG+ LRRYVFSQEDFRNDS M++D+YQ+NLP GL NLTLMGGFPL+LSKPH LEA+P VQ+AVEGL PDPE HLTFIDAEERSGVTFRTHKRVQLNAGL+RL FPSLSR +A LAT+L+ LNE E RC+REEVTWDFGLP G MLFLPMV YDE F+M SF DFK QVLGS S AKT QVAGPLFAV+L L+GV++++RGRR E+ELA RRT RYST+ EGDI+V Sbjct: 1 TARRIGPNVVYTGQGKTKARLQGYTMFQNMTQVHACPDPTTGDAPAPGEMPACDIYQADWTNRSAVRHGYLPQWGSAAANEVRGTDGSLFAHPLTGQETVVTFQEDYRRWIEMVYVGEVHDFHGVSLRRYVFSQEDFRNDSVMSADWYQDNLPTGLSNLTLMGGFPLFLSKPHFLEADPSVQQAVEGLDPDPESHLTFIDAEERSGVTFRTHKRVQLNAGLKRLRFPSLSRIEALSLATILQRDLNEAETRCVREEVTWDFGLPAEGDE----------HMLFLPMVRYDEGFEMPASFVKDFKKQVLGSTSAAKTVQVAGPLFAVLLALIGVIIIMRGRRNEQELARRRTHRYSTIHEGDIMV 354
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_018408784.1 (PREDICTED: lysosome membrane protein 2 [Nanorana parkeri]) HSP 1 Score: 135.2 bits (339), Expect = 7.800e-28 Identity = 130/497 (26.16%), Postives = 220/497 (44.27%), Query Frame = 0 Query: 65 CGIILISIALVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGDSVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVY-----LGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQENLPMGLCNLT-LMGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERL 555 CGI+ +S+ + +L + ++VE+ + TVLK +A++ +V+ I ++ + + N+TNP EVL G K ++E+GP+VYR+YR K N+ F E+G VS + KTY+F+ A+ G T + T PV+ +L+ LK+ + +L+P E L + + FTT+T ++ WGY D +L TLV+ ++ V E F GL N+ + + G + +G +EY F + EW + + W S+ N + GTDG+ F HPL KD ++ F D R + VY + E++ F +P + VF+ D+A LP GL N++ G P+ LS PH +A+ + +++EG+ P+ + H TF+D +G+ R KR+Q+N + ++ Sbjct: 9 CGILSLSLLITSIVLLVVHTFM--EMVETEVKKVTVLKNGT-EAYNAWVDPPPPIYMKFY----FFNVTNPLEVLDG-EKPVVDEIGPYVYREYRPKENIEFLENGTEVSAVTPKTYVFE--ADLSKGNPMTDFVRTVNIPVVTLLEKVLKS----KIAGILRPIIEAALKTYNEGM----------------------------FTTRTVHEMLWGYK-DPLL----TLVHKVDS------------SVDEMF-GLFYNMNTTND-----GTYVFLSGS-------KEYKDFTQI---------------------------VEWNGKR-----NLSWWTSDRCNMINGTDGTSF-HPLINKDDIIYMFSSDLCRSLYAVYNSTKTVKEIAAFRFIPPAK-VFANVTINPDNAGFCVPAGNCLPSGLLNVSECKQGAPIILSSPHFYQADESIVKSIEGISPNQDDHETFMDINPLTGILLRAAKRMQVNVHVRQI 399
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_017496783.1 (PREDICTED: lysosome membrane protein 2 [Manis javanica]) HSP 1 Score: 134.8 bits (338), Expect = 1.000e-27 Identity = 127/495 (25.66%), Postives = 204/495 (41.21%), Query Frame = 0 Query: 64 RCGIILISIALVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGDSVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQEN--LPMGLCNL-TLMGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERL 555 RC + +L ++T+ ++V ++ + +D QTV K + S +S N + ++ + N+TNP E+L G +LEEVGP+ YR+ RNK+++ F ++G T+S + KKTY+FD N G T + T PV+ + N +H R +E +EA Y+ L F T T +L WGY D +L +L+N + P + P + Y GT T N + EW +++ + W ++ N + GTDG F HPL KD V+ F D+ R V + + + GLP RY +E N S A + L G+ N+ T G P+ +S PH +A+ A++G+HP+ E H +F+D +GV R KR+Q+N +++L Sbjct: 3 RCCFYTVGTLSLLLLVTSVA-LLVARVFQKAVD-QTVQKNIVLRNGSETFDSWRNTPLPVYTQFYFFNVTNPEEILRGET-PQLEEVGPYTYRELRNKVDIQFGDNGTTISAVSKKTYIFDR--NQSVGDPATDLIRTLNIPVLTAM-----NWAQIHF--------------LRELIEALLEA-------YQQTL----------FVTHTVDELLWGYK-DEIL----SLINIFK-------------------PDISPYF------------GLFYGRNGTDDGDYVFLTGKDNYLNFSKI---------------------VEWNGKTS-----LDWWTTDRCNMINGTDGDSF-HPLISKDEVLYIFPSDFCRSVYITF-SDFDSVEGLPAFRYEVPKEILANTSENAGFCIPKGNCLGSGVLNISTCKNGAPIVISFPHFYQADERFVSAIKGMHPNKEYHESFVDINPLTGVILRAAKRIQINVYVKKL 392
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_020039640.1 (lysosome membrane protein 2 [Castor canadensis]) HSP 1 Score: 134.4 bits (337), Expect = 1.300e-27 Identity = 129/513 (25.15%), Postives = 216/513 (42.11%), Query Frame = 0 Query: 74 LVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVH-PVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGD--SVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQEN--LPMGLCNLTL-MGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERLHFPSLSRWQAGGLATML--KMTLNE 578 L L +L ++V ++ + +D QT+ K + + +S + + ++ + N+TNP E+L G K RLEEVGP+ YR+ RNK NV F ++G T+S + K Y+F+ + +D +I T++ PV+ V++ L V + +L+ Y+ L F T T +L WGY + S++H ++ ++ GL Q N T++ G + TG+ + N T + EW +++ + W ++ N + GTDG F HPL KD V+ F D+ R V +++ + GLP RY E N S A E L G+ N+++ G P+ +S PH +A+ A++G+HP+ E H TF+D +G+ R KR Q+N +++L + G + TM+ M LNE Sbjct: 12 LSLLLLVTSVTLLVARVFQKAMD-QTIEKTMVLRNGTQIFDSWERPPLPVYTQFYFFNVTNPEEILQG-EKPRLEEVGPYTYRELRNKANVQFGDNGTTISAVSNKAYVFERNQSVGDPKID---LIRTLNIPVLTVIEWAQARFLRVLIEAMLK--------------------------AYQQKL----------FVTHTVDELLWGYKDEILSLIHTFRSDISPNFGLF------------------YQKNGTND-------GDYVFLTGEDN----------YLNFTKI------------------------VEWNGKTS-----LDWWTTDQCNMINGTDGDSF-HPLIAKDEVLYVFPSDFCRSVYIIF-SDFESVQGLPAFRYKVPAEILANTSDNAGFCLPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADEKFISAIDGMHPNKEDHETFVDINPLTGIILRAAKRFQINIYVKKLD----DFIETGNIRTMVFPVMYLNE 413
BLAST of NO02G04410 vs. NCBI_GenBank
Match: PNI82876.1 (SCARB2 isoform 16, partial [Pan troglodytes]) HSP 1 Score: 134.4 bits (337), Expect = 1.300e-27 Identity = 129/495 (26.06%), Postives = 214/495 (43.23%), Query Frame = 0 Query: 70 ISIALVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGDSVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFR-RIGP--NIVYTGQGTTKAR---LQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQEN--LPMGLCNLTL-MGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERL 555 +S+ L++ +T + K V+ I+ + VL+ +AF +S + + ++ + N+TNP E+L G R+EEVGP+ YR+ RNK N+ F ++G T+S + K Y+F+ + +D +I T++ I VL G + Q + +AP + EAS W ++LC+ GV+ + W S + ++ ++ A+ L A K V E G + + S FR I P + Y GT L + N T + EW +++ + W ++ N + GTDG F HPL KD V+ F D+ R V + + + GLP RY E N S A E L G+ N+++ G P+ +S PH +A+ A+EG+HP+ E H TF+D +G+ + KR Q+N +++L Sbjct: 4 LSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGT-EAF----DSWEKPPLPVYTQFYFFNVTNPEEILRGET-PRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKID---LIRTLN--IPVLTGS---------CSVAQAGVQS-VAP-----SQLTEASTSWAP--GILLCRPGTPGVNHCAWAGPTVIEW-----SQVRFLREIIEAM--LKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKI------------------------VEWNGKTS-----LDWWITDKCNMINGTDGDSF-HPLITKDEVLYVFPSDFCRSVYITF-SDYESVQGLPAFRYKVPAEILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNKEDHETFVDINPLTGIILKAAKRFQINIYVKKL 432
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_015354760.1 (PREDICTED: lysosome membrane protein 2 [Marmota marmota marmota]) HSP 1 Score: 133.7 bits (335), Expect = 2.300e-27 Identity = 122/487 (25.05%), Postives = 205/487 (42.09%), Query Frame = 0 Query: 74 LVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGD--SVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQEN--LPMGLCNLTL-MGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERL 555 L L +L ++V ++ + +D QT+ K + + +S + + ++ + N+TNP E+L G RLEEVGP+ YR+ RNK NV F ++G T+S + K Y+F+ + VD L TLN+ + +++ + +L R +E ++A Y+ L F T T +L WGY + S++HA ++ ++ GL + N T++ G + TG+ + N T + EW +++ + W ++ N + GTDG F HPL KD V+ F D+ R V + + + GLP RY E N S A E L G+ N+++ G P+ +S PH +A+ A+ G+HP+ E H TF+D +G+ R KR Q+N +++L Sbjct: 12 LSLLLLVTGVTLLVARVFQKAVD-QTIEKNMVLRNGTEIFDSWEKPPLPVYTQFYFFNVTNPEEILRGEI-PRLEEVGPYTYREIRNKANVQFGDNGTTISAVSNKAYVFERNQSVGDPKVD------------------LIRTLNIPVLTVIEWAQVRFL---RTLIEAMLKA-------YQQKL----------FVTHTVDELLWGYKDEILSLIHAFRSDISPYFGLF------------------YEKNGTND-------GDYVFLTGEDN----------YLNFTKI------------------------VEWNGKTS-----LNWWATDKCNMINGTDGDSF-HPLITKDEVLYVFPSDFCRSVYITF-SDFESVQGLPAFRYKVPAEILANTSDNAGFCLPEGKCLGSGVLNVSICKNGAPIIMSFPHFYQADEKFVSAIHGMHPNKEDHETFVDINPLTGIILRAAKRFQINIYVKKL 392
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_003832339.1 (PREDICTED: lysosome membrane protein 2 [Pan paniscus]) HSP 1 Score: 132.9 bits (333), Expect = 3.900e-27 Identity = 122/491 (24.85%), Postives = 208/491 (42.36%), Query Frame = 0 Query: 70 ISIALVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGD--SVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQEN--LPMGLCNLTL-MGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERL 555 +S+ L++ +T + K V+ I+ + VL+ +AF +S + + ++ + N+TNP E+L G R+EEVGP+ YR+ RNK N+ F ++G T+S + K Y+F+ + +D L TLN+ + +++ S +L R +E ++A Y+ L F T T +L WGY + S++H + ++ GL + N T++ G + TG+ + + N T + EW +++ + W ++ N + GTDG F HPL KD V+ F D+ R V + + + GLP RY E N S A E L G+ N+++ G P+ +S PH +A+ AVEG+HP+ E H TF+D +G+ + KR Q+N +++L Sbjct: 12 LSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGT-EAF----DSWEKPPLPVYTQFYFFNVTNPEEILRGET-PRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKID------------------LIRTLNIPVLTVIEWSQVRFL---REIIEAMLKA-------YQQKL----------FVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLF------------------YEKNGTND-------GDYVFLTGEDS----------YLNFTKI------------------------VEWNGKTS-----LDWWITDKCNMINGTDGDSF-HPLITKDEVLYVFPSDFCRSVYITF-SDYESVQGLPAFRYKVPAEILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAVEGMHPNKEDHETFVDINPLTGIILKAAKRFQINIYVKKL 392
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_011782614.1 (PREDICTED: lysosome membrane protein 2 isoform X1 [Colobus angolensis palliatus]) HSP 1 Score: 132.9 bits (333), Expect = 3.900e-27 Identity = 123/491 (25.05%), Postives = 207/491 (42.16%), Query Frame = 0 Query: 70 ISIALVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGD--SVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQEN--LPMGLCNLTL-MGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERL 555 +S+ L++ +T + K V+ I+ + VL+ +AF +S + + ++ + N+TNP E+L G R+EEVGP+ YR+ RNK NV F ++G T+S + K Y+F+ + VD L TLN+ + +++ S +L R +E ++A Y+ L F T T +L WGY + S++H + ++ GL + N T++ G + TG+ + N T + EW +++ + W ++ N + GTDG F HPL KD V+ F D+ R V + + + GLP RY E N S A E L G+ N+++ G P+ +S PH +A+ A+EG+HP+ E H TF+D +G+ + KR Q+N +++L Sbjct: 12 LSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGT-EAF----DSWEKPPLPVYTQFYFFNVTNPEEILRGET-PRVEEVGPYTYRELRNKANVQFGDNGTTISAVSNKAYVFERDQSVGDPKVD------------------LIRTLNIPVLTVIEWSQVHFL---REIIEAMLKA-------YQQKL----------FVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLF------------------YEKNGTND-------GDYVFLTGEDN----------YLNFTKI------------------------VEWNGKTS-----LDWWITDKCNMINGTDGDSF-HPLITKDEVLYVFPSDFCRSVYITF-SDYESVQGLPAFRYKVPAEILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNKEDHETFVDINPLTGIILKAAKRFQINIYVKKL 392
BLAST of NO02G04410 vs. NCBI_GenBank
Match: XP_023078280.1 (lysosome membrane protein 2 [Piliocolobus tephrosceles]) HSP 1 Score: 132.9 bits (333), Expect = 3.900e-27 Identity = 123/491 (25.05%), Postives = 207/491 (42.16%), Query Frame = 0 Query: 70 ISIALVLGILTACGPVIVDKLVESGIDAQTVLKGPKGKAFSTFVESGDNIGVEIFYALRYLNLTNPTEVLAGTAKARLEEVGPFVYRQYRNKLNVTFAEDGETVSFILKKTYMFDEAANADTGLVDTQAMITTVHPVIQVLQGQLKNTLNVHLTELLQPSAEGWLAPFRRSVERQIEASGLWKAVYKLVLCQGNPMGVSPFTTQTARDLYWGYHGD--SVLHAMQTLVNAIEGLAAKINKEIALPVVPEAFPGLQPNLTSEAETFRRIGPNIVYTGQGTTKARLQEYTMFQNMTSVRACPDPTTGAIPEEDEMPSCDVYQAEWGNRSAARHGYMPQWGSEAANQVRGTDGSLFAHPLTGKDTVV-TFQEDYRRWVEMVYLGEVSDFHGLPLRRYVFSQEDFRNDSAMASDFYQEN--LPMGLCNLTL-MGGFPLYLSKPHLLEAEPLVQEAVEGLHPDPERHLTFIDAEERSGVTFRTHKRVQLNAGLERL 555 +S+ L++ +T + K V+ I+ + VL+ +AF +S + + ++ + N+TNP E+L G R+EEVGP+ YR+ RNK NV F ++G T+S + K Y+F+ + VD L TLN+ + +++ S +L R +E ++A Y+ L F T T +L WGY + S++H + ++ GL + N T++ G + TG+ + N T + EW +++ + W ++ N + GTDG F HPL KD V+ F D+ R V + + + GLP RY E N S A E L G+ N+++ G P+ +S PH +A+ A+EG+HP+ E H TF+D +G+ + KR Q+N +++L Sbjct: 12 LSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGT-EAF----DSWEKPPLPVYTQFYFFNVTNPEEILRGET-PRVEEVGPYTYRELRNKANVQFGDNGTTISAVSNKAYVFERDQSVGDPKVD------------------LIRTLNIPVLTVIEWSQVHFL---REIIEAMLKA-------YQQKL----------FVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLF------------------YEKNGTND-------GDYVFLTGEDN----------YLNFTKI------------------------VEWNGKTS-----LDWWITDKCNMINGTDGDSF-HPLITKDEVLYVFPSDFCRSVYITF-SDYESVQGLPAFRYKVPAEILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNKEDHETFVDINPLTGIILKAAKRFQINIYVKKL 392 The following BLAST results are available for this feature:
BLAST of NO02G04410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04410 ID=NO02G04410|Name=NO02G04410|organism=Nannochloropsis oceanica|type=gene|length=2202bpback to top protein sequence of NO02G04410.1 >NO02G04410.1-protein ID=NO02G04410.1-protein|Name=NO02G04410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=695bpback to top Synonyms
Publications
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