NO02G04390, NO02G04390 (gene) Nannochloropsis oceanica

Overview
NameNO02G04390
Unique NameNO02G04390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1717
Alignment locationchr2:1188508..1190224 -

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Properties
Property NameValue
DescriptionCystathionine beta-lyase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1188508..1190224 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004121cystathionine beta-lyase activity
GO:0030170pyridoxal phosphate binding
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR006233Cys_b_lyase_bac
IPR000277Cys/Met-Metab_PyrdxlP-dep_enz
Homology
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_027299059.1 (cystathionine beta-lyase [Rhodospirillales bacterium URHD0088])

HSP 1 Score: 455.3 bits (1170), Expect = 2.100e-124
Identity = 229/395 (57.97%), Postives = 279/395 (70.63%), Query Frame = 0
Query:   35 GLGTRLTHLSRPSGHC--FVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVLKA 428
            G GTRL HL R   H   FVNPP+ RGSTVL PTV  R  +     R EQAL YG+ G  THH LE+++A+IEGGTR QI SSGL+A T  LLAY  AGDH L+PDS+YGP RGFA+ MLR   ++V YY      + +AAL++ NT VVY ESPGSHTFE+ DV A+A VA   GAK + DNT+GIHFF+PF  G VD+S+QALTKYVVGHSD LLG+IT N   +WE+VR   L LG+  SPDDCWLA+RG R++ VRL++QM++GL VA + +E    +V  VLHPA P  PGH  + RDY+G CSLF VVF P +S EA HAM++S  LF IGASWGGFESL LPTT  +TR+      +  GP  RFH+GLEE  DL ADL +G+ VL+A
Sbjct:   10 GFGTRLAHLGRAGTHVHGFVNPPLYRGSTVLQPTVAARREA--GNHRLEQALIYGVLGGPTHHALENVIADIEGGTRCQIVSSGLAAVTTPLLAYLHAGDHCLMPDSVYGPARGFADSMLRPLGIEVTYYRPEIDESGLAALMRPNTKVVYGESPGSHTFEMQDVPALARVAHGRGAKLLFDNTWGIHFFQPFAHG-VDVSIQALTKYVVGHSDVLLGSITTNADADWERVRSTTLALGQYASPDDCWLALRGVRSMAVRLEHQMKSGLAVAAWFAER--PEVHQVLHPALPGAPGHALWKRDYSGACSLFGVVFKPEFSVEATHAMVESLALFGIGASWGGFESLALPTTGFVTRTAGSG--TFAGPVCRFHIGLEEPADLIADLEKGLAVLRA 397          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: OJW23764.1 (cystathionine beta-lyase [Rhodospirillales bacterium 69-11])

HSP 1 Score: 442.6 bits (1137), Expect = 1.400e-120
Identity = 216/392 (55.10%), Postives = 274/392 (69.90%), Query Frame = 0
Query:   38 TRLTHLSR--PSGHCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVLKA 428
            T+LTH+ R   + H FVNPP+ RGSTVL+PTV +R        R +Q LTYG+ GS+TH  LED++A +EGGT   + SSGL+A T  LLAY  AGDH L+PDS+YGP R F +G L RF V+  YYH +     +A L++ NT VVY ESPGSHTFEV DV AIA  A   GAK ++DNT+GIHFF+PF  G VD+S+QA TKY  GHSD L+G ITV   ++WE++   V  LG+  SPDDCWL +RG RT+GVRL+ QMEAG+E+A +LS+    +V+ VLHPA P  PGHD + RD+TG CSLF VVF P +S EA HA  ++  LF IGASWGG+ESL LPTT  +TR+      +  GP  R H+GLE++ED+KADL RG+  L+A
Sbjct:   16 TQLTHVGRRPKTEHGFVNPPLLRGSTVLYPTVADRKR--LGGMRGKQVLTYGLGGSQTHWALEDLMAEVEGGTHCAVVSSGLAAVTTPLLAYLSAGDHCLMPDSVYGPARNFCDGFLTRFGVETTYYHPTIDEAGIAKLMRPNTKVVYTESPGSHTFEVQDVPAIARAAHAGGAKVLMDNTWGIHFFQPFAHG-VDVSIQAATKYPAGHSDILIGTITVAAEDDWERIHTTVRSLGQYASPDDCWLTLRGMRTMGVRLQAQMEAGIEIAHWLSKR--PEVLQVLHPALPGAPGHDLWRRDFTGACSLFGVVFKPEHSLEASHAFSEALELFGIGASWGGYESLALPTTGFVTRTAGSG--AFEGPLVRLHIGLEDIEDIKADLERGLAALRA 400          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_096448603.1 (cystathionine beta-lyase [Thauera sp. K11] >ATE60646.1 cystathionine beta-lyase [Thauera sp. K11])

HSP 1 Score: 439.1 bits (1128), Expect = 1.600e-119
Identity = 216/386 (55.96%), Postives = 276/386 (71.50%), Query Frame = 0
Query:   38 TRLTHLSRPSG--HCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLR-RFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRR 421
            TRL+HL+RP    H FVNPP+ RGSTVL P+   R  SW  + R++Q LTYG++G+ETHH LE+++A+IEGGTR Q+ SSGL+A  IALLAY + G+H L+PDS+YGPVR F +G+L  R  V+V YY       ++ AL++ NT V+Y+ESPGSHTFE+ DV A+A++AR  G K ++DNT+G+HFF+PF  G VD+S+QALTKY  GH+D LLG+I   + E+W  VRQ  L  G+  SPDDCWL +RG RTL VRL+ QM +GLEVAR+   A   +V+ VLHPA P  PGHD + RD+ G CSLF VVF P + E  + AM+D+ RLF IGASWGGFESL LPT  ++ R+  P    L GP  RFHVGLEE  DL ADL R
Sbjct:   11 TRLSHLARPGTRVHGFVNPPLHRGSTVLVPSTAARRESW--KHRYDQYLTYGLHGNETHHALENLIADIEGGTRCQVVSSGLAANCIALLAYLRHGEHCLIPDSVYGPVRSFCDGVLAGRMAVEVGYYRPDLAPAELEALVRPNTRVLYLESPGSHTFEIQDVPALAALARRRGLKVLMDNTWGLHFFQPFRHG-VDVSIQALTKYAGGHADVLLGSIVTRSDEDWRAVRQTALLYGQYASPDDCWLTLRGLRTLNVRLRQQMASGLEVARWF--AARPEVLRVLHPALPGAPGHDIWRRDFDGACSLFGVVFRPEFGETRIDAMIDALRLFGIGASWGGFESLALPTYGSVVRTAAPL--DLGGPAVRFHVGLEEPADLIADLER 389          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_099093983.1 (cystathionine beta-lyase [Roseomonas rhizosphaerae] >PHK96253.1 cystathionine beta-lyase [Roseomonas rhizosphaerae])

HSP 1 Score: 436.8 bits (1122), Expect = 7.800e-119
Identity = 220/401 (54.86%), Postives = 275/401 (68.58%), Query Frame = 0
Query:   27 KHSIILQGGLGTRLTHLSRPS--GHCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVL 426
            KH      G  TR+ H  RP    H FVN PV RGSTVL+P+ + R A     +  EQ +TYG  G  TH  LE+MVA IEGGTR+ IT +GL+ACT+ L+AY  AGDH L+PDS+YGP R  AEGML+RF ++  YY  +     + ALL+ NT V+Y ESPGSHTFE+ D+ A+A VA  HGAK ++DNT+GIH F+PF KG VD+S+QALTKYV GHSD LLG++TV T E+W  V     E+G   SPDDCWLA+RG R++ +RLK+Q EAGL VAR+  E  P +V+ V+HP  PS P H  + RD+TG CSLF VVF P Y  + + A++D  +LF IGASWGG+ESL LPTTN ITR+   +   L GPT RFH+GLEE  DL ADL  G+D L
Sbjct:   24 KHGANSGHGFATRMAHGGRPGLREHGFVNTPVHRGSTVLYPSCEARGA--LNARSLEQVMTYGTAGGPTHFALENMVAEIEGGTRALITGTGLAACTLPLMAYLSAGDHCLIPDSVYGPTRRVAEGMLKRFGIETSYYDPTIDAAGLQALLRPNTRVLYTESPGSHTFEMQDIPALAEVAHAHGAKVLMDNTWGIHHFQPFTKG-VDVSIQALTKYVGGHSDVLLGSVTVATEEDWRIVAGAAREIGHYASPDDCWLALRGLRSMPMRLKHQYEAGLAVARWF-EGRP-EVLRVIHPGLPSHPQHALFKRDFTGGCSLFGVVFQPRYDVKQVEAVIDGLKLFGIGASWGGYESLALPTTNHITRT-ATSTGILEGPTVRFHIGLEEPADLIADLEAGLDTL 418          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_019015491.1 (cystathionine beta-lyase [Elioraea tepidiphila])

HSP 1 Score: 436.4 bits (1121), Expect = 1.000e-118
Identity = 219/396 (55.30%), Postives = 267/396 (67.42%), Query Frame = 0
Query:   35 GLGTRLTHLSR--PSGHCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVLKAF 429
            G  TR++H  R     H FVNPPV RGSTVL+    +R A+    KRF+QALTYG  G   HH LED++  IEGG+R QI  +GL+A T+ LLAY   GDH+LLPDS+YGP R FA+  L R  V+  YY        +A+L++ NT VVY ESPGSHTFEV D+ AIA  A   G K ++DNT+GIH F+PF  G VD+S+QALTKYVVGHSD LLG+ITVN+ E+W  +R   L  G   SPDDCWLA+RG RT+ VRL  Q EAGL VAR+   A   +V+ VLHPA P  PGH+ + RD+TG CSLF VVF P YS EA HA +D+  LF IGASWGG+ESL LPTT  + R+       L GP  RFH+GLE+VEDL ADL RG+  L  +
Sbjct:   13 GFRTRMSHAGRAGTKAHGFVNPPVHRGSTVLYARCADRVAA--ASKRFDQALTYGTQGGPNHHALEDVICEIEGGSRCQIVGTGLAAVTVPLLAYLGVGDHLLLPDSVYGPARAFADTQLSRMGVETTYYDPCVDEAGMASLIRPNTKVVYTESPGSHTFEVQDIPAIARAAHARGCKVLMDNTWGIHHFQPFRHG-VDVSIQALTKYVVGHSDVLLGSITVNSPEDWTTIRSTALAHGHYASPDDCWLALRGVRTMPVRLAAQQEAGLRVARWF--AARPEVLRVLHPALPGAPGHELWKRDFTGACSLFGVVFRPDYSVEATHAFVDALSLFGIGASWGGYESLALPTTGFVKRTATAG--DLGGPAVRFHIGLEDVEDLIADLERGMAALAGY 401          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_007002883.1 (cystathionine beta-lyase [Roseomonas cervicalis] >EFH09917.1 cystathionine beta-lyase [Roseomonas cervicalis ATCC 49957])

HSP 1 Score: 434.1 bits (1115), Expect = 5.100e-118
Identity = 225/422 (53.32%), Postives = 287/422 (68.01%), Query Frame = 0
Query:    8 HAATP--TGPEAPPSTDKGNDKHSIILQGGLGTRLTHLSRPS--GHCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVL 426
            HA  P    P   PS   G++        G  TR++H  RP    H FVN PV RGSTVL+P+ + R +     +  EQ +TYG  G  TH  LE+MVA IEGG R+ IT +GL+ACT+ L+AY  AGDH L+PDS+YGP R  A+GML+RF ++  YY  +     +AAL++ NT VVY+ESPGSHTFE+ DV A+A VA  HGAK ++DNT+GIH F+PF KG VD+S+QALTKYV GHSD LLG++TV T E+W  +     E+G   SPDDCWLA+RG RT+ +RLK+Q EAGL VAR+  E+ P +V+ V+HPA PS P H  + RD+TG  SLF VVF P YS + + A++D  +LF IGASWGG+ESL LPTTN I+R+   A  +L GPT RFHVGLE+  DL ADL  G+D L
Sbjct:   12 HALMPDHLPPGRKPSQSSGHNSGH-----GFATRMSHGGRPGVREHGFVNTPVYRGSTVLYPSCEARGS--INARSLEQVMTYGTAGGPTHFALENMVAEIEGGHRALITGTGLAACTLPLMAYLSAGDHCLIPDSVYGPTRRIADGMLKRFGIETGYYDPTIDAAGLAALMRPNTKVVYLESPGSHTFELQDVPALAEVAHAHGAKVLMDNTWGIHHFQPFTKG-VDVSIQALTKYVGGHSDVLLGSVTVATEEDWRIIASAAREVGHYASPDDCWLALRGLRTMPMRLKHQYEAGLAVARWF-ESRP-EVLRVIHPALPSHPQHALFKRDFTGGASLFGVVFQPRYSTQQIDAVVDGLKLFGIGASWGGYESLALPTTNYISRTATDA-GTLQGPTVRFHVGLEDAADLIADLEAGLDTL 422          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_007434590.1 (cystathionine beta-lyase [Acetobacteraceae bacterium AT-5844] >EHM03363.1 cystathionine beta-lyase [Acetobacteraceae bacterium AT-5844])

HSP 1 Score: 432.2 bits (1110), Expect = 1.900e-117
Identity = 218/406 (53.69%), Postives = 281/406 (69.21%), Query Frame = 0
Query:   25 NDKHSIILQGGLGTRLTHLSRPS--GHCFVNPPVQRGSTVLFPTVKER---NASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVL 426
            +D HS   Q    TR+TH+SRP    H FVN  V RGSTVL+P+ + R   NA+ FE+     ALTYG +G  TH  LED +A IEGGTR  I  +GL+AC + LLA+ KAGDH L+PDS+YGP R  A+G++  + ++  YY  + +G ++ AL++ NT V+Y ESPGSHTFE+ D+ A+A+VA  HGAK ++DNT+GIH ++PF+ G VD+S+QALTKYV GHSD LLG++TVN  E+W  V      +G   SPDDCWLA+RG RT+ VRLK+Q EAGLEVAR+  +    +V  VLHPA PS P H  + RD+TG CSLF VVF P Y+   + A +DS RLF IGASWGG+ESL LPTTN +TR+   A  +L GPT RFH+GLE+V DL ADL   +  L
Sbjct:    3 DDLHSKAPQ-RFATRVTHVSRPGVRNHGFVNGGVHRGSTVLYPSCEARGTINAAGFEK----HALTYGTSGGPTHFALEDAIAEIEGGTRCLIVGTGLAACAVPLLAFLKAGDHCLIPDSVYGPTRRLADGLMTGWGIETTYYDPTISGDELQALMRPNTRVLYTESPGSHTFELQDIDALAAVAHAHGAKVLMDNTWGIHHYQPFKHG-VDVSIQALTKYVGGHSDVLLGSVTVNNEEDWHTVASAGRFMGHYASPDDCWLALRGLRTMAVRLKHQEEAGLEVARWFEQ--QPEVFRVLHPALPSHPQHALFKRDFTGACSLFGVVFQPRYTPAQLEAAVDSLRLFGIGASWGGYESLALPTTNYVTRTATDA-AALGGPTVRFHIGLEDVRDLIADLSTALATL 399          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_076955508.1 (cystathionine beta-lyase [Roseomonas deserti] >ONG59047.1 cystathionine beta-lyase [Roseomonas deserti])

HSP 1 Score: 427.9 bits (1099), Expect = 3.600e-116
Identity = 219/412 (53.16%), Postives = 279/412 (67.72%), Query Frame = 0
Query:   16 EAPPSTDKGNDKHSIILQGGLGTRLTHLSRPS--GHCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVL 426
            + PP+T   N            TR+TH  RP    H FVN PV RGSTVL+P+  +  A    ++ FEQ +TYG  G  TH  LE+MVA IEGG+R+ I  +GL+AC++ L+AY  AGDH L+PDS YGP R  A GML RF ++VEYY   A    +  L++ NT V+++ESPGSHTFE+ D+ A+A VA  HGAK I+DNT+G+H F+PF KG VD+S+QALTKYV GHSD LLG++TVN+ E+W  V     ++G   SPDDCWLA+RG RT+ +RLK+Q +AGL VAR+  E+ P +V  VLHPA PS P H  + RD++G CSLF VVF P Y+   + A +D  +LF IGASWGG+ESLVLPTTN ITR+   +   L GPT RFHVGLEE  DL ADL   +D L
Sbjct:    4 DLPPTTRHSNSGQD------FATRVTHGGRPGIREHGFVNTPVYRGSTVLYPSCSDGVA--INKRSFEQVMTYGTAGGPTHFALENMVAEIEGGSRALIVGTGLAACSLPLMAYLSAGDHCLIPDSTYGPTRRVANGMLVRFGIEVEYYDPLADAAGLERLMRPNTKVLFVESPGSHTFELQDIPALAEVAHAHGAKVIMDNTWGVHHFQPFTKG-VDVSIQALTKYVGGHSDVLLGSVTVNSEEDWLTVVAAARQIGHYASPDDCWLALRGLRTMALRLKHQQQAGLAVARWF-ESRP-EVARVLHPALPSHPQHALFKRDFSGACSLFGVVFQPRYTPAQIEAAVDGLKLFGIGASWGGYESLVLPTTNGITRT-ATSLDVLEGPTVRFHVGLEEPADLIADLEAALDGL 403          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_073132358.1 (cystathionine beta-lyase [Roseomonas rosea] >SHI79539.1 cystathionine beta-lyase [Roseomonas rosea])

HSP 1 Score: 425.6 bits (1093), Expect = 1.800e-115
Identity = 218/402 (54.23%), Postives = 274/402 (68.16%), Query Frame = 0
Query:   26 DKHSIILQGGLGTRLTHLSRPSG--HCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVL 426
            D+H   L  G  TR++H  R     H FVNPPV RGSTVLFP    R A+   ++R+EQ LTYG  G  THHMLEDM+A IEGGTR  I  +GL+A  + LLAY K+GDH L+PDS+YGP R  A+G++  F ++  YY        + AL++ NT VVY ESPGSHTFEV D+ AIA VA   GAK ++DNT+G H F+PF  G VD+S+QALTKY  GHSD LLG++TVN  E+W  V+  V++LG+  S DDCWL +RG RTL VRLK Q E GL VAR+L E+ P +V+ +LHPA PS P H  + RD++G CSLF VV  P YSE    A++D+  LF IGASWGG+ESL LPTT +ITR+     P+L GP  R HVGLE+ +DL ADL + +D L
Sbjct:    3 DRHDKSL--GFSTRMSHHGRAGAKVHGFVNPPVHRGSTVLFPDCGSRKAA--AKQRYEQVLTYGTAGGPTHHMLEDMIAEIEGGTRCAIVGTGLAAVMVPLLAYLKSGDHCLMPDSVYGPARNLADGLMTGFGIETTYYDPCVDEAGLRALMRPNTKVVYTESPGSHTFEVQDIPAIARVAHAAGAKVLMDNTWGFHNFQPFVHG-VDVSIQALTKYAAGHSDVLLGSVTVNNPEDWSIVKGAVIQLGQFASADDCWLCLRGLRTLPVRLKQQAENGLVVARWL-ESRP-EVLRLLHPALPSHPQHALFARDFSGACSLFGVVLQPRYSEADAEAVVDALALFGIGASWGGYESLALPTTPSITRT--AGDPALGGPAIRLHVGLEDTQDLIADLAQALDRL 395          
BLAST of NO02G04390 vs. NCBI_GenBank
Match: WP_048860509.1 (cystathionine beta-lyase [Acidisphaera rubrifaciens] >GAN76645.1 cystathionine beta-lyase [Acidisphaera rubrifaciens HS-AP3])

HSP 1 Score: 422.2 bits (1084), Expect = 2.000e-114
Identity = 218/392 (55.61%), Postives = 267/392 (68.11%), Query Frame = 0
Query:   38 TRLTHLSRPS--GHCFVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDMVANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEGMLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAIASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLGAITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAGLEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPMYSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGPTARFHVGLEEVEDLKADLRRGIDVLKA 428
            TRLTH  R     H FVNPP+ RGSTVL  +  +R A+   ++  +Q L YG+ G+ TH  LED VA IEGGTR QI SSGL+A T ALLAY +AG+H L+PDS+YGP R F   +   + +   YY  +     +AAL++ +T VV++ESPGSHTFE+ DV AIA  A   GAK ++DNT+GI FF+PF  G VD S+QALTKYV GHSD LLG+IT N+ E+WE+VRQ  L LG+  SPDDCWLA+RG RTL VRL  QM AGL VA +L E    +V  VLHPA P   GHD + RDYTG CSLF VV  P Y+ EAMH M+D   LF IGASWGG+ESLVLPTT T+TR+         GP  R H+GLE+V+DL ADL  G  +L+A
Sbjct:   15 TRLTHAGRAGTRAHGFVNPPLTRGSTVLHESCADRRAA--GQRGLDQYLIYGVCGTPTHWALEDAVAEIEGGTRCQIVSSGLAAVTTALLAYLRAGEHCLMPDSVYGPSRRFCGMLESHYGIHTTYYDPALGDAGIAALMRPHTRVVFVESPGSHTFEMQDVAAIARAAHAGGAKVLMDNTWGIQFFQPFRHG-VDASIQALTKYVGGHSDVLLGSITTNSDEDWERVRQTALILGQYASPDDCWLALRGVRTLAVRLDAQMAAGLRVAAWLRER--PEVSEVLHPALPGARGHDIWRRDYTGACSLFGVVLRPDYTVEAMHRMIDGLTLFGIGASWGGYESLVLPTTGTLTRTAGTG--DFGGPAMRLHIGLEDVDDLIADLDAGFAILRA 399          
The following BLAST results are available for this feature:
BLAST of NO02G04390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_027299059.12.100e-12457.97cystathionine beta-lyase [Rhodospirillales bacteri... [more]
OJW23764.11.400e-12055.10cystathionine beta-lyase [Rhodospirillales bacteri... [more]
WP_096448603.11.600e-11955.96cystathionine beta-lyase [Thauera sp. K11] >ATE606... [more]
WP_099093983.17.800e-11954.86cystathionine beta-lyase [Roseomonas rhizosphaerae... [more]
WP_019015491.11.000e-11855.30cystathionine beta-lyase [Elioraea tepidiphila][more]
WP_007002883.15.100e-11853.32cystathionine beta-lyase [Roseomonas cervicalis] >... [more]
WP_007434590.11.900e-11753.69cystathionine beta-lyase [Acetobacteraceae bacteri... [more]
WP_076955508.13.600e-11653.16cystathionine beta-lyase [Roseomonas deserti] >ONG... [more]
WP_073132358.11.800e-11554.23cystathionine beta-lyase [Roseomonas rosea] >SHI79... [more]
WP_048860509.12.000e-11455.61cystathionine beta-lyase [Acidisphaera rubrifacien... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007103NSK007103Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04390.1NO02G04390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575074gene_1030Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04390.1NO02G04390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04390 ID=NO02G04390|Name=NO02G04390|organism=Nannochloropsis oceanica|type=gene|length=1717bp
ATGGCTTCAGCCTCCCCACCCCATGCCGCCACACCCACCGGACCCGAGGC
ACCACCATCGACAGATAAAGGCAACGATAAGCACTCCATCATTTTGCAGG
GTGGCCTAGGGACCCGCTTGACCCACCTGTCCCGCCCCTCTGGTCACTGC
TTCGTCAATCCACCAGTGCAGCGAGGTTCGACTGTGCTCTTTCCCACGGT
CAAGGAACGGAATGCTTCATGGTTTGAGCGCAAGCGCTTCGAGCAAGCCT
TGACGTACGGCATCAATGGCAGTGAGgtatgctttaaaactggcaattac
agaatcgactccatttgcagggcactcctctctatgtcaaccgttttgcg
tgcctctttcgcttccccccccgccggtccctcacctccctcccacccca
tacagACCCACCACATGCTCGAAGATATGGTCGCCAACATTGAAGGCGGC
ACCCGCTCTCAAATTACCAGCTCGGGGCTCTCCGCCTGTACGATCGCCCT
TCTTGCCTACACCAAAGCAGGAGACCATGTCTTGCTCCCGGATTCTATCT
ACGGCCCCGTCCGTGGGTTTGCAGAAGGCATGCTCCGACGCTTTCATGTC
GACGTGGAATATTACCATGCCTCCGCGACTGGGACAGACGTGGCTGCGTT
GTTGAAAGAGAATACAACGGTCGTGTATATTGAGAGCCCTGGCTCGCATA
CCTTCGAGGTGGTGGATGTGAAGGCAATTGCGAGTGTCGCGAGGAATCAT
GGAGCCAAGAGCATTTTGGATAACACGTATGGAATTCATTTTTTTCGACC
ATTTGAGAAGGGGAATGTGGACATCAGCGTTCAGgtatgctcaaccttag
aaaaaggaaagagagtggcagtgctgcttggaaaggaaagttttagacaa
tatattgtcattacccctctgatcccacctcaatcacttttcctccttcc
atccctccctcccttcctccttctgcctacaaagGCACTCACCAAATACG
TTGTGGGTCATTCTGATGCCCTCCTCGGTGCCATCACCGTCAACACCAGG
GAGAATTGGGAGCAGGTACGACAATGTGTCCTCGAGCTCGGGGAGGCTGT
CTCACCCGACGATTGCTGGTTGGCTATTCGTGGTGCGCGAACACTGGGAG
TCAGGCTGAAGTACCAGATGGAAGCAGGATTGGAGGTGGCCCGgtgggta
gggagggagaagtggaggagggagggatgacaagtgggaagcgatcggaa
ggtgaggagacagtcaaagacacacactaaccgacactctatttccaaaa
tctgcacattttcccaaaccaacacaaagGTACCTGTCGGAGGCCTTCCC
TCAAGACGTCGTTACTGTCCTCCACCCCGCGTTCCCCTCCTGTCCCGGCC
ATGACTTCTACCTCAGAGACTACACGGGGTGCTGCTCCTTGTTTTCCGTT
GTCTTCCACCCCATGTACAGTGAAGAGGCCATGCATGCCATGTTGGATTC
CTACCGGCTGTTTGCAATCGGGGCGAGTTGGGGTGGCTTTGAGAGCTTGG
TGTTGCCGACGACCAATACGATCACTCGGTCGATTGAACCGGCGTTTCCT
TCGCTGGTGGGGCCAACGGCAAGGTTTCATGTGGGGTTGGAGGAGGTGGA
GGACTTGAAGGCGGACCTGAGGAGAGGAATCGATGTGTTAAAGGCGTTTG
ATAATGGCGGGAAGTAG
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protein sequence of NO02G04390.1

>NO02G04390.1-protein ID=NO02G04390.1-protein|Name=NO02G04390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MASASPPHAATPTGPEAPPSTDKGNDKHSIILQGGLGTRLTHLSRPSGHC
FVNPPVQRGSTVLFPTVKERNASWFERKRFEQALTYGINGSETHHMLEDM
VANIEGGTRSQITSSGLSACTIALLAYTKAGDHVLLPDSIYGPVRGFAEG
MLRRFHVDVEYYHASATGTDVAALLKENTTVVYIESPGSHTFEVVDVKAI
ASVARNHGAKSILDNTYGIHFFRPFEKGNVDISVQALTKYVVGHSDALLG
AITVNTRENWEQVRQCVLELGEAVSPDDCWLAIRGARTLGVRLKYQMEAG
LEVARYLSEAFPQDVVTVLHPAFPSCPGHDFYLRDYTGCCSLFSVVFHPM
YSEEAMHAMLDSYRLFAIGASWGGFESLVLPTTNTITRSIEPAFPSLVGP
TARFHVGLEEVEDLKADLRRGIDVLKAFDNGGK*
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Synonyms
Publications