NO02G04380, NO02G04380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04380 vs. NCBI_GenBank
Match: KPV50074.1 (hypothetical protein SE17_29075 [Kouleothrix aurantiaca]) HSP 1 Score: 90.1 bits (222), Expect = 5.600e-15 Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 0 Query: 14 IYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVMEKGDWPLPGSDDPEPPTCPHVFGKIERDAVRAVKQVTREAGTGKFL 131 IYHLA + W AE+ Y L +GF H T E+ +L +AN FYQ APG FV+L+ID +LS+ + E P P + P P PH++G I+R A+ V++V R A G+F+ Sbjct: 2 IYHLAPAERWHTWPAEQ-PYTPAELAADGFVHCTGESSTMLAVANRFYQGAPGGFVMLLIDPERLSAPLRWEAPADPAPNAGPPLAPLFPHIYGPIDRAAIVDVREVQR-AADGRFV 116
BLAST of NO02G04380 vs. NCBI_GenBank
Match: XP_013896706.1 (hypothetical protein MNEG_10278 [Monoraphidium neglectum] >KIY97686.1 hypothetical protein MNEG_10278 [Monoraphidium neglectum]) HSP 1 Score: 84.7 bits (208), Expect = 2.400e-13 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 14 IYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVMEKGD--WPLPGSDDPEPPTCPHVFGKIERDAVRAVKQVTREAGTGKFLSID 134 +YHL +++ WE AE +DY+ + E +GF H T E L+L +AN FY G F++L +D+ +L+SKVV E P + PH++G I+ AV V R A G FL+I+ Sbjct: 11 LYHLVQQELWESVKAEHKDYYPPTFESDGFIHLTKEANLLLPVANHFYTGVQGAFLVLELDSTRLTSKVVFEPAAPVGSTPAKESQAQQLFPHLYGTIDAAAVVRELPVVR-AADGAFLAIE 131
BLAST of NO02G04380 vs. NCBI_GenBank
Match: PJF48892.1 (hypothetical protein CUN48_01120 [Chloroflexi bacterium]) HSP 1 Score: 83.6 bits (205), Expect = 5.300e-13 Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 0 Query: 14 IYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVME--KGDWPLPGS--DDPEPPTC---PHVFGKIERDAVRAVKQVTREAGTGKFLSID 134 I HLA + +W EA E+ Y SL EGF HAT L+L +AN Y++ PG+FV+L +D KL+S+V E GD P + D P PH++G I RDA+ AV+ TR+A G F+ D Sbjct: 2 ILHLAPRADW-EATPPEQPYRAASLATEGFIHATQGDALLLRVANTLYKNRPGEFVVLAVDESKLTSEVRWEAPTGDVIPPEATVSDTAPDDALRFPHIYGPINRDAIVAVRLATRDA-DGAFVGFD 126
BLAST of NO02G04380 vs. NCBI_GenBank
Match: PNW81813.1 (hypothetical protein CHLRE_06g261350v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 82.0 bits (201), Expect = 1.500e-12 Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 0 Query: 14 IYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVME--------KGDWPLPGSD---DPEPPTCPHVFGKIERDAVRAVKQVTREAGTGKFLSI 133 +YHL ++ W + AE YF + +++GF H TAE + +L + N FY+ G F+LLV+D KLS+KV+ E D G + E P PH++G I+ AV A + R+A +G FLSI Sbjct: 4 LYHLVQESIWAKCKAEGTAYFPPTYDQDGFIHLTAEPRFLLGVGNQFYKDVAGTFLLLVLDYEKLSAKVIFEPAAPVGSKSSDGLSAGGEAKAKEELPLFPHLYGTIDFGAVTAELPIERDA-SGAFLSI 132
BLAST of NO02G04380 vs. NCBI_GenBank
Match: XP_005788154.1 (hypothetical protein EMIHUDRAFT_122619 [Emiliania huxleyi CCMP1516] >EOD35725.1 hypothetical protein EMIHUDRAFT_122619 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.7 bits (195), Expect = 7.600e-12 Identity = 49/131 (37.40%), Postives = 66/131 (50.38%), Query Frame = 0 Query: 11 PSTIYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIAN-------AFYQSAPGDFVLLVIDTPKLSSKVVMEKGDWPLPGSDDPEPPTCPHVFGKI-ERDAVRAVKQVTREAGTGKFLSID 134 PS IYH+ +K W+ A+A +YF + EGF HAT E L+L + N Y+ G F+ L IDT L+S V ME +P +P P PH+FG I V +V R+ G FLSI+ Sbjct: 9 PSVIYHVVQKSLWDAALASGVNYFPPRYDIEGFIHATHEANLLLGVLNWRHPKHGFIYKHIEGTFLCLAIDTAVLTSPVKMEAA---VPTESNPNPIAFPHIFGPILPLSCVTRQMEVVRDPQDGTFLSIE 136
BLAST of NO02G04380 vs. NCBI_GenBank
Match: KUJ67299.1 (hypothetical protein ACZ90_29970 [Streptomyces albus subsp. albus]) HSP 1 Score: 77.8 bits (190), Expect = 2.900e-11 Identity = 42/110 (38.18%), Postives = 58/110 (52.73%), Query Frame = 0 Query: 14 IYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVMEKGDWPLPGSDDPEPPTCPHVFGKIERDAVRAVKQVTRE 124 I+HL R +W VA +R Y SL +EGF H + + L +ANAFY+ PG + L++D KL V E D P P P PH++G I R AV + +V R+ Sbjct: 2 IFHLVRLDDW--LVAPDRPYAPTSLAEEGFVHCSPDESTTLAVANAFYREVPGPLMALLVDEHKLDVMVRWEAAD-PAPPPGVPAGTLFPHIYGHIVRSAVEGMMEVVRD 108
BLAST of NO02G04380 vs. NCBI_GenBank
Match: XP_005789539.1 (hypothetical protein EMIHUDRAFT_252193 [Emiliania huxleyi CCMP1516] >EOD37110.1 hypothetical protein EMIHUDRAFT_252193 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 77.0 bits (188), Expect = 4.900e-11 Identity = 48/131 (36.64%), Postives = 65/131 (49.62%), Query Frame = 0 Query: 11 PSTIYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIAN-------AFYQSAPGDFVLLVIDTPKLSSKVVMEKGDWPLPGSDDPEPPTCPHVFGKI-ERDAVRAVKQVTREAGTGKFLSID 134 PS IYH+ +K W+ A+A +YF + EGF HAT E L+L + N Y+ G F+ L IDT L+S V M +P +P P PH+FG I V +V R+ G FLSI+ Sbjct: 9 PSVIYHVVQKSLWDAALASGVNYFPPRYDIEGFIHATHEANLLLGVLNWRHPKHGFIYKHIEGTFLCLAIDTAVLTSPVKMVAA---VPTESNPNPIAFPHIFGPILPLSCVTRQMEVVRDPQDGTFLSIE 136
BLAST of NO02G04380 vs. NCBI_GenBank
Match: WP_053134314.1 (DUF952 domain-containing protein [Streptomyces ambofaciens] >AKZ56956.1 hypothetical protein SAM23877_3911 [Streptomyces ambofaciens ATCC 23877]) HSP 1 Score: 76.6 bits (187), Expect = 6.500e-11 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 0 Query: 14 IYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVMEKGDWPLPGSDDPEPPTCPHVFGKIERDAVRAVKQV-TREAGTGKFLS 132 IYH+ +W+ R Y SL ++GF H + + + LT+ +AFY+ AP ++LVID +L+++ V E + P P PE PHVFG ++R+AVR V +V EAG LS Sbjct: 2 IYHVVPLADWD--ADPGRPYAPASLAEDGFVHCSPDEETTLTVVDAFYRGAPRPLLVLVIDEERLTARCVWEAAE-PAPPPGVPEGTLFPHVFGPVDREAVRRVLEVGWDEAGRATGLS 117
BLAST of NO02G04380 vs. NCBI_GenBank
Match: KXZ52180.1 (hypothetical protein GPECTOR_10g809 [Gonium pectorale]) HSP 1 Score: 76.6 bits (187), Expect = 6.500e-11 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 0 Query: 17 LARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVMEK----GDWPLPGSDDPEPPTCPHVFGKIERDAVRAVKQVTREAGTGKFLSI 133 + + + W A + YF + E++GF H TA+ K +L I N FY++ G+F+LLV++ +L++KVV E G G E P PH++G I+ AV A + R+A G FL+I Sbjct: 1 MVQAELWRAAKDSGKPYFPPTYEQDGFIHLTADPKFLLGIGNHFYRTVQGEFLLLVLEPERLAAKVVFEPAAPVGTKSAEGLSAEEAPLFPHLYGTIDYGAVTAELPIQRDA-EGAFLAI 119
BLAST of NO02G04380 vs. NCBI_GenBank
Match: WP_095584414.1 (DUF952 domain-containing protein [Streptomyces albireticuli] >PAU45031.1 hypothetical protein CK936_31820 [Streptomyces albireticuli]) HSP 1 Score: 76.6 bits (187), Expect = 6.500e-11 Identity = 42/110 (38.18%), Postives = 58/110 (52.73%), Query Frame = 0 Query: 14 IYHLARKQEWEEAVAEERDYFTDSLEKEGFTHATAETKLILTIANAFYQSAPGDFVLLVIDTPKLSSKVVMEKGDWPLPGSDDPEPPTCPHVFGKIERDAVRAVKQVTRE 124 IYH+ +W +R Y SL EGF H + + + L + AFY++ PG ++L+ID KL V E D P P PE PHVFG+I RDAV + +V R+ Sbjct: 2 IYHVVPLDDW--LAVPDRPYSPASLSDEGFVHCSPDEETTLAVVTAFYRATPGPLMVLLIDEHKLDVMVRWEAAD-PAPPPGVPEGTLFPHVFGRINRDAVDGMMEVQRD 108 The following BLAST results are available for this feature:
BLAST of NO02G04380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04380 ID=NO02G04380|Name=NO02G04380|organism=Nannochloropsis oceanica|type=gene|length=408bpback to top protein sequence of NO02G04380.1 >NO02G04380.1-protein ID=NO02G04380.1-protein|Name=NO02G04380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=136bpback to top Synonyms
Publications
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