NO02G04350, NO02G04350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04350 vs. NCBI_GenBank
Match: EWM30218.1 (RAP domain protein [Nannochloropsis gaditana]) HSP 1 Score: 764.6 bits (1973), Expect = 2.900e-217 Identity = 492/758 (64.91%), Postives = 549/758 (72.43%), Query Frame = 0 Query: 8 EGNQTSKGARRRPRAATAVSI----TSIATLLCCLQHVTHTAAFQSLLPQPPPMPAAPPCHRSRRRPT---SFFSSIAGSSSDGIGFGIDFDELLRSGTNNGSPFGPTSAPTTWRELTSPRLSKXXXXXXXXXXXXXXXXXXXXXRPKAAGIASXXXXXXXXXXXXXXXXXXXXXXXXFP-GRWQATKDESQHMQDRILCAQSDPSEMLRLLFDNPLACNHVNICTVLHRCGKLSGTPSLTPAVDNAITQRLLPVLTLVLPACKGRQLCNVAWALVRLGMPDEELFSRIISRLQANNGALXXXXXXXXXXXXXXXXXXXXMTLQYASFFEMAAEPIAAKAVGLRPREIGLITWAYATWLGNDMKLNGQQLQGLGNVMHGSF--VETAEGRKG-GREGGATATGARKWLLKPMVSLLEATLHVEAQLQAKDIAMIAWAFGKISPMDWNAIGPHVDMLCAVLASSALKSIRRFSAQDLAELSVGVVAMQYDNANLMQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLEVYDVGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755 E + +RRRPR T ++ S+ L LQ ++ AFQS P P + RP FSS AG SSDG F + FDE RS T+NG+ P ++ TTWR+L S R P A F G W+A+K+ESQH Q IL AQS+P++MLRLL DNP CNHVN+CTVLHRC +L+GTP LTPA++ ITQ LLPV+ VLPACKGRQLCN+AW+LVRLGMPDE LF I RLQ G L +T Q+ASFFE AA +A AVGLRPREIGLITWAYATWLGND+KLNGQQ +G+G G + + EG G G G RKWL+ PMVSLLEATL VEA LQAKDIAMIAWAFGKI+ +DWNA+GPHVDMLCAVLAS+AL+ IR FSAQDLAELSVGVVAMQYDNANLMQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVLEVYDVGLF+EVFARAAADEGL++LQEGDLNQLYQVY LLRLQAPEAV G+GR LL+AME AWA SK++EKRTTKRQAAV KVLE+L IR+ VEAE+DIDILLP+HGVALEVDGPAHFLRNTGHPMGHTI+KRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKC+T+EVLY+NDLDSS HKPYPPRGKKTRFD Sbjct: 35 ESPHRTTSSRRRPRQRTVANVMVKWCSVTALFGGLQQLSRGDAFQSTC--SGSSPGLPRVRCNAPRPVFLPPLFSSFAG-SSDG-SFDMSFDEFFRSETSNGNACTPGTS-TTWRDLASHRAPGTPPPRFPRHRQQLGSPLSPPASPALAETTDVALPSDPQRPQAARPPLPGRLGAGFQLGDWRASKEESQHTQSLILQAQSEPADMLRLLLDNPSCCNHVNVCTVLHRCARLAGTPRLTPAIEATITQSLLPVVAEVLPACKGRQLCNLAWSLVRLGMPDEALFDATIDRLQERQGGLLEACNAGELAMVLWAIASAGLTFQHASFFERAAGSLAELAVGLRPREIGLITWAYATWLGNDLKLNGQQQRGMGAGGLGGWESCDAVEGEAGAGWAAGLPGPSGRKWLVAPMVSLLEATLQVEADLQAKDIAMIAWAFGKIAALDWNAMGPHVDMLCAVLASAALRHIRDFSAQDLAELSVGVVAMQYDNANLMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVLEVYDVGLFREVFARAAADEGLRLLQEGDLNQLYQVYCLLRLQAPEAVTGVGRGLLVAMEEAWAISKDREKRTTKRQAAVAKVLESLHIRHRVEAENDIDILLPEHGVALEVDGPAHFLRNTGHPMGHTIMKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCQTEEVLYYNDLDSSTHKPYPPRGKKTRFD 787
BLAST of NO02G04350 vs. NCBI_GenBank
Match: CEL94246.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 147.9 bits (372), Expect = 1.300e-31 Identity = 80/208 (38.46%), Postives = 124/208 (59.62%), Query Frame = 0 Query: 555 VLEVYDVGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQ-----IRYEVEAEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPY---PPRGKKTRFD 755 + E YD LF++++A+ A +E + L QLYQ + +L + P+AV + L + AAW K++ K +++ A+ L L + + EAEHDIDI L D +A+EV GP HF NT P+GHT++K ++L+L G+ V+ +P++E++R S+ME KRYLQRK E L +++ D+S +KPY P GK +RFD Sbjct: 1078 ISETYDAQLFRDIYAQ-AQNELPDAISWLALLQLYQAWVVLSAECPDAVSEVDDAFLARLHAAWDRVKKRPKESSEHHRAISACLMTLSEFRCCVNHVTEAEHDIDIALLDRRLAVEVHGPTHFACNTRRPLGHTLLKNKMLQLQGWGVVQIPYWEWERXXXXSTMEKKRYLQRKLEITAPLKYSNRDTSYYKPYIPHAPAGKLSRFD 1284
BLAST of NO02G04350 vs. NCBI_GenBank
Match: OEU20875.1 (hypothetical protein FRACYDRAFT_167272, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 114.8 bits (286), Expect = 1.200e-21 Identity = 74/235 (31.49%), Postives = 121/235 (51.49%), Query Frame = 0 Query: 567 VFARAAAD-EGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL--------------------------PDH-GVALEVDGPAHFLR---NTGHP----------------MGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755 +FA AA + + +Q +QL+Q Y +L PEAVK I + + ++ W+ K ++K+++ R ++ L+ + + + E + DID+ + DH VA+E DGP HF R N P +GHT++K RLL+ G+ V+ VP++EFD+IP+W+SME +RYLQRK +T + F+++D S++K P K+RFD Sbjct: 471 IFAEAARSCKKNRSIQLEHAHQLWQAYFMLEEDCPEAVKRIPKWFVTYLKGKWSIEKARDKKSSARHRSLSSTLQLMGVDHINEHDEDIDVAIILQPNAQWVHETDMDDEITDSVIDGEEDHVSVAVEFDGPNHFTRVRINDDEPPAAGAFPPSRPDPPRALGHTVLKYRLLKKQGWTVVRVPYYEFDKIPFWASMERQRYLQRKLKTHANINFSEVDVSEYKELTP-DFKSRFD 704
BLAST of NO02G04350 vs. NCBI_GenBank
Match: XP_002177034.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51497.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 114.0 bits (284), Expect = 2.000e-21 Identity = 75/224 (33.48%), Postives = 119/224 (53.12%), Query Frame = 0 Query: 561 VGLFKEVFARAAA---DEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL---------------PDHGV--ALEVDGPAHFLR-----NTGHP-----MGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755 + L +FA AAA +G+ L+ +QL+Q Y LL+ +P V + + W+ K + K ++ R ++ + L+ + I ++ E + DID+ + GV A+E DGP HF R N P +GHT++K RLL+ G+ V+ VP++EFD+IPYW+SME +RYLQR +T L F+ +D S++K P ++TRFD Sbjct: 703 IRLLSTIFADAAAACEKDGIIQLEHA--HQLWQAYFLLQESSPPVVANVSHWFRDYLRDKWSLEKSRTKLSSARHRSLSQALDLMGIAHKNEHDEDIDVAIVLKKSAVWTHQTKRDGTEGVKLAVEFDGPNHFTRQRKPSNGSKPDVPRALGHTVLKYRLLKKQGWTVVRVPYYEFDKIPYWASMERQRYLQRLLKTHANLRFSQVDVSEYKA-PVPNRETRFD 923
BLAST of NO02G04350 vs. NCBI_GenBank
Match: GAX15779.1 (hypothetical protein FisN_3Lh221 [Fistulifera solaris]) HSP 1 Score: 110.5 bits (275), Expect = 2.200e-20 Identity = 75/233 (32.19%), Postives = 116/233 (49.79%), Query Frame = 0 Query: 554 TVLEVY----DVGLFKEVF---ARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL------------------PDHGVALEVDGPAHFLRNTG-------HPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755 TVLE Y L + F A A EG L+ +QL+Q +L + E V + A+ W K + K ++ R ++ +L + + + E + DID+ + VA+E DGP HF R+TG +GHT +K R+L+ G+ V+ VP++EFD+IP+W+SME +RYLQR +T + F++LD S++K P +KTRFD Sbjct: 276 TVLEEYRSHESKALLNDFFRDAASACTVEGTIQLEHA--HQLWQALYILDGECQECVSSVPSWFREALRDKWLAEKSRSKTSSLRHKSISDLLRLMGVAHVNEHDEDIDVAIILKSQASWTHETDVMCGTAGMKVAVEFDGPTHFARSTGCHNKVLPRALGHTNLKYRILKRQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHVNIRFSNLDVSEYKT-PISDRKTRFD 505
BLAST of NO02G04350 vs. NCBI_GenBank
Match: CBN77531.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 110.2 bits (274), Expect = 2.900e-20 Identity = 129/350 (36.86%), Postives = 174/350 (49.71%), Query Frame = 0 Query: 422 LQAKDIAMIAWAFGKISPMDWNAIGPHVDMLCAVLASSALKSIRRFSAQDLAELSVGVVAMQYDNANL--MQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVLEVYDVGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRY----------------------------EVEAEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKH 742 L +D+AM++W F +S + P VLA +A + + F QD++ +S+ + M +D+ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+ DV L +E+ A A G L E +QLYQVY L PE K + E LMA++ W ++++ KR++ V + L+ +QI + LEVDGPAHF +NT P+GH ++K R L MG+ V+S+P E+D IP+WSSME KRYLQRK + ++KH Sbjct: 331 LTPQDLAMLSWGFSSLS-QECLPCQPAAYRALDVLAKAARECVGNFRPQDVSMVSLALARMSWDDPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRMLDGPGMSAQEIANLAWALAVMGEADVELLEELLRSAQAQRGDFTLIES--HQLYQVYLLWGKDMPELWKELDGEFLMALKRRWTDNQQRTKRSSCSHLEVSQTLDLMQISHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVDGPAHFTKNTARPLGHMVLKHRTLSKMGWTVVSIPFLEWDPIPFWSSMEKKRYLQRKLGITRTILRAPKATAKH 677
BLAST of NO02G04350 vs. NCBI_GenBank
Match: GAX16296.1 (hypothetical protein FisN_3Hh221 [Fistulifera solaris]) HSP 1 Score: 109.4 bits (272), Expect = 5.000e-20 Identity = 74/233 (31.76%), Postives = 116/233 (49.79%), Query Frame = 0 Query: 554 TVLEVY----DVGLFKEVF---ARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDIDILL------------------PDHGVALEVDGPAHFLRNTG-------HPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755 TVLE Y L + F A A EG L+ +QL+Q +L + E V + A+ W K + K ++ R ++ +L + + + E + DID+ + VA+E DGP HF R+TG +GHT +K R+L+ G+ V+ VP++EFD+IP+W+SME +RYLQR +T + F++LD S++K P +KTR+D Sbjct: 424 TVLEEYRSHESKALLNDFFRDAATACTVEGTIQLEHA--HQLWQALYILDGECQECVSSVPSWFREALRDKWLAEKSRSKTSSLRHKSISDLLRLMGVAHVNEHDEDIDVAIILKSQASWTHETDFMCDSAGMKVAVEFDGPTHFARSTGSYNKVLPRALGHTNLKYRILKRQGWTVVRVPYYEFDKIPFWASMERQRYLQRLLKTHVNIRFSNLDVSEYKT-PISDRKTRYD 653
BLAST of NO02G04350 vs. NCBI_GenBank
Match: XP_002289283.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92820.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.5 bits (267), Expect = 1.900e-19 Identity = 74/240 (30.83%), Postives = 124/240 (51.67%), Query Frame = 0 Query: 554 TVLEVYD---VGLFKEVFARAAADEGLQMLQEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVEAEHDID---ILLPDHG-----------------VALEVDGPAHF--LRNTG--------------HPMGHTIIKRRLLELMGYNVISVPHFEFDRIPYWSSMELKRYLQRKCETDEVLYFNDLDSSKHKPYPPRGKKTRFD 755 TVL YD V L + + AA+ G ++Q +QL+Q Y LL P AV+ + E +E W K + K+++ R + + LE +++ + E + D+D +L D VA+E DGP HF + +TG +GHT++K RLL+ G+ V+ +P++E+D+IP ++SME +RYLQR +T E + F+ +D S+++ P+ + +RFD Sbjct: 600 TVLGHYDSDVVALLQNI-VHAASSSGDGVIQLEHAHQLWQSYFLLSEDCPAAVEFVPAEFSQFLEKKWNIEKNRGKQSSSRHRTISQTLELMRVAHRNEYDEDVDVAIVLQEDSSWTHTAQKDLDNQEGRVKVAVEFDGPFHFTVMASTGKDLTMIENGVKIAPRVLGHTVLKYRLLKKKGWAVVRIPYYEWDKIPSFASMERQRYLQRALKTHETISFSGVDVSQYQAM-PQTRHSRFD 837
BLAST of NO02G04350 vs. NCBI_GenBank
Match: OAE24536.1 (hypothetical protein AXG93_2415s1150 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12 Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 0 Query: 581 QEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVE---AEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRI 710 Q L+QL+QV L L+ PE G L E+ W K +K T+ Q V +L + ++ E A H +D L + +ALE+DGP HF RNTG +GHT++KRR L G+ V+S+P+ E+D + Sbjct: 608 QTMQLSQLHQVTLSLELEYPELDLLPGEPLRSMAESEWEKLKIGKKSTSTTQRDVEILLTSTGRQWVGEYSAASHSLDAALVEERIALEIDGPTHFARNTGRALGHTVLKRRQLSAAGWIVLSIPYQEWDEL 739
BLAST of NO02G04350 vs. NCBI_GenBank
Match: PTQ26897.1 (hypothetical protein MARPO_0276s0001 [Marchantia polymorpha] >PTQ35697.1 hypothetical protein MARPO_0069s0042 [Marchantia polymorpha] >PTQ35698.1 hypothetical protein MARPO_0069s0042 [Marchantia polymorpha]) HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12 Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 0 Query: 581 QEGDLNQLYQVYSLLRLQAPEAVKGIGRELLMAMEAAWATSKEKEKRTTKRQAAVVKVLENLQIRYEVE---AEHDIDILLPDHGVALEVDGPAHFLRNTGHPMGHTIIKRRLLELMGYNVISVPHFEFDRI 710 Q L+QL+QV L L+ PE G L E+ W K +K T+ Q V +L + ++ E A H +D L + +ALE+DGP HF RNTG +GHT++KRR L G+ V+S+P+ E+D + Sbjct: 569 QTMQLSQLHQVTLSLELEYPELDLLPGEPLRSMAESEWEKLKIGKKSTSTTQRDVEILLTSTGRQWVGEYSAASHSLDAALVEERIALEIDGPTHFARNTGRALGHTVLKRRQLSAAGWIVLSIPYQEWDEL 700 The following BLAST results are available for this feature:
BLAST of NO02G04350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04350 ID=NO02G04350|Name=NO02G04350|organism=Nannochloropsis oceanica|type=gene|length=3006bpback to top protein sequence of NO02G04350.1 >NO02G04350.1-protein ID=NO02G04350.1-protein|Name=NO02G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=755bpback to top Synonyms
Publications
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