NO02G04320, NO02G04320 (gene) Nannochloropsis oceanica

Overview
NameNO02G04320
Unique NameNO02G04320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2415
Alignment locationchr2:1168140..1170554 -

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Properties
Property NameValue
DescriptionNuclear protein DGCR14
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1168140..1170554 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR019148Nuclear_protein_DGCR14
Homology
BLAST of NO02G04320 vs. NCBI_GenBank
Match: EWM30311.1 (Nuclear protein DGCR14 [Nannochloropsis gaditana])

HSP 1 Score: 422.5 bits (1085), Expect = 2.500e-114
Identity = 260/510 (50.98%), Postives = 303/510 (59.41%), Query Frame = 0
Query:    2 SMVPRGGHGAGGNGSKDDHLLPAPSPVGSRALAQAYKRGLPTPSPLRRMEDPCADHIMPSRNDKGKKEKHALMLPPAVPPSRTRRKTQPQVLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMRRDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTR-MLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPLRVSEPFDYGG---GXXXXXXXXGERKRFEIQGPTFREKVAGELEAKARTRGGKMREG 508
            ++V RG  G        +    A +  G++A+A+AYKRGLPTPSPLRRMEDPCADHIMPSR++K  K +++LM             + PQVLDED+FVDAMGEIIERDFFP L                              E R+    A+                 A T     D  +          A++S   +  PLPL+LDQFLA+F SEDDAAFD LAERMREAHRRKYWW+Y+HP+LE GKEKLYLLP+GEMMTEE+ R+HV AANAKPRLGDDRPNAPETWP R +N  +F PGSLEENA+VH RG + ATQP  LLL+ D   GTR +L AG    G N RVG   KAPK LVHSNTRF A   L WK    G    RA PLER  S+    +S          AQ   TEGFVPMTPLLVPG  GDVPIMTWGE+ESTPLRV+EPFDYG             G R+ F IQ    RE+VA  LE++    GG    G
Sbjct:    3 AVVARGAQGNDPLARDKNEKGRAAAKGGAQAIAKAYKRGLPTPSPLRRMEDPCADHIMPSRSEKKSKTQNSLMXXXXXXXXXXXXXS-PQVLDEDSFVDAMGEIIERDFFPELPKLHRQMKWLQAL-----------------ESRQLRSLAEVQRLVLSGGSLEQIVSRADTGAGLGDSGHGLGSETPLSTAASSDAPTLPPLPLTLDQFLARFHSEDDAAFDDLAERMREAHRRKYWWVYAHPQLETGKEKLYLLPNGEMMTEEEQRRHVEAANAKPRLGDDRPNAPETWPIRAKNALMFGPGSLEENARVHERGRDGATQP-ALLLEDDEANGTRPLLLAG---NGGNARVGLAAKAPKRLVHSNTRFHAGS-LSWK----GRDPSRALPLERPRSD----ASSXXXXXXXXXAQREVTEGFVPMTPLLVPGAEGDVPIMTWGEVESTPLRVAEPFDYGSPVVPVESRGDALGSRQGFHIQPTGSRERVANALESQRGQTGGTGSRG 481          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: OQR94390.1 (hypothetical protein ACHHYP_01404 [Achlya hypogyna])

HSP 1 Score: 121.7 bits (304), Expect = 9.100e-24
Identity = 116/420 (27.62%), Postives = 173/420 (41.19%), Query Frame = 0
Query:   88 TQPQVLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMRRDTFAADGXXXXXXXXXXXXXXXXAS-----TPVTRNDQRYNTPRSDTSVLASN--SGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPLRVSEPFDYGGGXXXXXXXXGERKRFEIQGPTFREKVAGELEAKARTR 501
            ++ QVL+ED +V+A+  IIERDFFP L                           + S+ ++   A                   AS     TP  R      +P +  S   S   SG + P+   ++L+ FLA   SED+AAF+ L ++  EAH++KY W +     +     L LLP G MMT+++      A + K  L D RP  PETW  R +N  +F P  +E +  +             +LL + G+  ++ L   +       R G   K P   V+SN+RFS                      +   S    +  E         A A A +  V MTPL+VPG     P+MTWG I +TP+ +      GG              F+I+  + REK+A E++AK + R
Sbjct:    4 SRKQVLEEDAYVEALDAIIERDFFPDLPKLKYQTMYLDAVATKNPALIEQVRQYIASDQKKRPQARASSSTRHGTAKRPRHEDSASAWDMPTP-PREASDVTSPNNSASGAESQEVSGAAPPATATMTLNHFLATHTSEDNAAFEELQDKAVEAHKKKYHWAFDD---DHANTHLRLLPDGTMMTKDRRLLMDKACDTKLALEDARPAGPETWTFRARNQLLF-PPDMETSRAI----CKVPQSESSVLLLEGGKSTSQQLAVKS-------RTGAVTKKPMETVYSNSRFS----------------------DAFLSLQDVIPDE---------APAPALD-LVEMTPLIVPGEHNASPLMTWGAIAATPMILKSDAPTGG------------PSFQIKEASRREKLALEMDAKNKQR 363          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: XP_008869232.1 (hypothetical protein H310_06092 [Aphanomyces invadans] >ETW02627.1 hypothetical protein H310_06092 [Aphanomyces invadans])

HSP 1 Score: 116.7 bits (291), Expect = 2.900e-22
Identity = 117/444 (26.35%), Postives = 184/444 (41.44%), Query Frame = 0
Query:   88 TQPQVLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMRRDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQ----RYNTPRSDTSVLASNSGESSPSPLP-----------LSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKV-------HLRGANA-------ATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDV--PIMTWGEIESTPLRVSEPFDYGGGXXXXXXXXGERKRFEIQGPTFREKVAGELEAKARTR 501
            ++  +LDED +VDA+ +IIERDFFP L                           +  E R                        + TP+    +    +   PR+   V   N  + +PS  P           ++L++F+A+  SED+AAF+ L E+    H+RKY W Y  P    G  KL+LL  G  ++ E+ +    A + K  L D RP  P+TW  R +N  + +P  L+ +  +        L G++         T   + LLK    EG+ ++     VA    R G   K P   V++N+RF ++                    +  AS+++ L+ E               + FVPMTPLLVPG G D   P++TWG I++TP+ + +                 R  F I+  + REK+A  ++AK + R
Sbjct:    6 SKKHILDEDEYVDALDKIIERDFFPDL--------ERLKHQAMWLDAVASNNPRLIQEAREYLINQRSSQEASRSSSHPESLRKSRTPIVETCESSWDQPTPPRASQGVQVDNGADETPSITPSTAGASHPTSSMTLNEFIAKHTSEDNAAFEELQEKAINDHKRKYHWAYDDP-ANRGDAKLHLLNDGTWISRERRQLMDKACDTKLTLEDSRPAVPDTWRYRVRNP-LHFPPDLDTSRSICKVPPVSDLAGSSVLQLENGDTTSTTMPLLKGGSDEGSVIV-----VAKRTKRTGAAPKQPMETVYANSRFRSA----------------FLSAQDAASDVNPLNEE--------------VKDFVPMTPLLVPG-GPDAASPMITWGSIDATPMILRD-------DVAATDTKPGRPTFVIKESSAREKLAHAMDAKNKQR 396          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: XP_008614183.1 (hypothetical protein SDRG_09992 [Saprolegnia diclina VS20] >EQC32242.1 hypothetical protein SDRG_09992 [Saprolegnia diclina VS20])

HSP 1 Score: 112.1 bits (279), Expect = 7.200e-21
Identity = 106/386 (27.46%), Postives = 153/386 (39.64%), Query Frame = 0
Query:   80 PPSRTRRKTQPQVLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMR---------RDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEG---FVPMTPLLVPGVGGDVPIMTWGEIESTPL 454
            P   +    + QVL+ED +V+A+  IIERDFFP L                           + ++ +         R   A  G                  TP  R     + P  D + +  ++GE +PS   ++L+ FLA   SED+AAF+ L E+    H++KY W +     +    +L LLP G  MT+EQ      A + K  L D RP AP+TW  R +N  +F P      A   L     AT P  +LL ++G           G    + R G   K P   V++N+RFS                                   T+F  +   A   A +     V MTPL+VPG     P+MTWG+I +TP+
Sbjct:    3 PEFASMASNRKQVLEEDAYVEALDAIIERDFFPDLPKLKYQTMWLDALATKNAALIAQVRQYIANDQQKRPQTRTSSRSQQAHTGGGKRKRADDEATSSWDVPTP-PRVSSDVDEPNEDDATI-DDAGE-APSTATMTLNHFLATHTSEDNAAFEELQEKAVAEHKKKYHWAFDD---DHATTRLLLLPDGTRMTKEQRLLMDKACDTKLALEDARPAAPDTWTFRARNQLLFPPDLATSRAICKLE----ATAPGDVLLLENGPAPQN------GALTKSLRTGAVAKKPMETVYANSRFS-----------------------------------TAFLATQDLAPDVAPDAPLDLVEMTPLIVPGDQNGSPLMTWGDIAATPM 337          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: XP_012209614.1 (hypothetical protein SPRG_14777 [Saprolegnia parasitica CBS 223.65] >KDO19698.1 hypothetical protein SPRG_14777 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 112.1 bits (279), Expect = 7.200e-21
Identity = 103/373 (27.61%), Postives = 147/373 (39.41%), Query Frame = 0
Query:   91 QVLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEM----------RRDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPL 454
            QVL+ED +V+A+  IIERDFFP L                           + ++           R       G                  TP  R       P  D + +       S +   ++L+ FLA   SED+AAF+ L E+    H++KY W +     +    +L LLP G  MT+E+      A + K  L D RP AP+TW  R +N  +F P      A   L    A T   +LLL+     GT  L A       + R G   K P   V++N+RFS++     +      P   A+PL+                              V MTPL+VPG G + P+MTWG+I +TP+
Sbjct:    7 QVLEEDAYVEALDAIIERDFFPDLPKLKYQTMWLDALATKNAALIAQVRQYIANDQQKRPQTKTSSRSQLEGLTGSSKRKRADDEGASAWDVPTP-PRTSSDIEEPTEDDATVGDAGEAPSKATATMTLNHFLATHTSEDNAAFEELQEKAVAEHKKKYHWAFDD---DHATTRLLLLPDGTKMTQERRLLMDKACDTKLALEDSRPVAPDTWTFRARNQLLFPPDLETSRAICKL---EATTTGDVLLLE----NGT--LPAPDRALTKSLRTGAVAKKPMETVYANSRFSSAFLASQELPPDIAP---AAPLD-----------------------------LVEMTPLIVPGDGNESPLMTWGDIAATPM 334          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: XP_024572058.1 (Nuclear protein ES2 [Plasmopara halstedii] >CEG35689.1 Nuclear protein ES2 [Plasmopara halstedii])

HSP 1 Score: 112.1 bits (279), Expect = 7.200e-21
Identity = 115/414 (27.78%), Postives = 170/414 (41.06%), Query Frame = 0
Query:   92 VLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMRRDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPLRVSEPFDYGGGXXXXXXXXGERKRFEIQGPTFREKVAGELEAKARTRGGKMR 506
            VL+ED +V+ +G IIERDFFP L                            ++ +R  +  +D                     +   D R        SV+AS           ++L++F+A   SED+ +F  L E+    H+RKY W +   + + G  KL+LL +G  ++++Q RK V  A A   L DDRP  PETW  R +N  IF P   E  A   +    AA++ QLLL K                   N R     ++    V++N+RF                          ++++  + SE    +S     +R     VPMTP++ PGV    P+MTWG+IE+TP  +      G               FEIQ  + REKVA  LE++AR R   +R
Sbjct:    6 VLEEDEYVETLGLIIERDFFPDL------------PKLQKQRRLLLADEGTETALRAISTTSDDTSVRSNASVVGWDQPTPYAKLAAGD-RVQVEDDSNSVMAS-----------MTLNRFVATHTSEDNESFKELQEKAVNDHQRKYHWAFDENK-DKGDSKLHLLANGTWISKDQ-RKLVDEACAPKGLKDDRPGFPETWRYRARNPLIFQP---ELEATRDICQIKAASKGQLLLEKDP-----------------NSRSRLPPRSRAKTVYANSRF-------------------------FSNDVQLVESECGGGSSA----SRDKYSLVPMTPIIAPGVDAS-PLMTWGDIEATPTILDNEATPG--------RIWNTPSFEIQDTSRREKVATRLESEARHRNPNLR 335          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: XP_012209390.1 (hypothetical protein SPRG_14731 [Saprolegnia parasitica CBS 223.65] >KDO19888.1 hypothetical protein SPRG_14731 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 110.2 bits (274), Expect = 2.700e-20
Identity = 103/384 (26.82%), Postives = 151/384 (39.32%), Query Frame = 0
Query:   80 PPSRTRRKTQPQVLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMR---------RDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREG-TRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPL 454
            P   +    + QVL+ED +V+A+  IIERDFFP L                           + ++ +         R   +  G                  TP  R     + P  D + +       S +   ++L+ FLA   SED+AAF+ L E+    H++KY W +     +    +L LLP G  MT+E+      A + K  L D RP AP+TW  R +N  +F P      A   L    A T   +LLL+        R LT        + R G   K P   V++N+RFS++     +      P   A+PL+                              V MTPL+VPG G   P+MTWG+I +TP+
Sbjct:    3 PEFASMASNRKQVLEEDAYVEALDAIIERDFFPDLPKLKYQTMWLDALATKNAALIAQVRQYIANDQQKRPQTKTSSRSQQSLTGGSKRKRADDEGASAWDVPTP-PRTSSDIDEPTEDDATVDDAGEAPSKATATMTLNHFLATHTSEDNAAFEELQEKAVAEHKKKYHWAFDD---DHANTRLLLLPDGTKMTQERRLLMDKACDTKLALEDARPVAPDTWTFRARNQLLFPPDLETSRAICKL---EATTTGDVLLLENGTPPAPDRALT-------KSLRTGAVAKKPMETVYANSRFSSAFLASQELPPDIAP---AAPLD-----------------------------LVEMTPLIVPGDGNGSPLMTWGDIAATPM 340          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: ETI43806.1 (hypothetical protein F443_11398 [Phytophthora parasitica P1569] >ETK83871.1 hypothetical protein L915_11088 [Phytophthora parasitica] >ETL37286.1 hypothetical protein L916_10986 [Phytophthora parasitica] >ETM43730.1 hypothetical protein L914_10921 [Phytophthora parasitica] >ETO72482.1 hypothetical protein F444_11468 [Phytophthora parasitica P1976] >ETP13617.1 hypothetical protein F441_11315 [Phytophthora parasitica CJ01A1] >ETP41680.1 hypothetical protein F442_11283 [Phytophthora parasitica P10297] >KUF64867.1 DGCR14 protein [Phytophthora nicotianae])

HSP 1 Score: 109.4 bits (272), Expect = 4.700e-20
Identity = 111/415 (26.75%), Postives = 176/415 (42.41%), Query Frame = 0
Query:   92 VLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMRRDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHR-KHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPLRVSEPFDYGGGXXXXXXXXGERKRFEIQGPTFREKVAGELEAKARTRGGKMR 506
            VL+E+ +V+A+G+IIERDFFP L                             + +R    A+                    TPV  +        +D  V   +S +S+ +   ++L++F+A   SED+ +F+ L E+  + H+R+Y W +   + E G  KL+LL +G  +++EQ +    A A+  P+  D RP+APETW  R +N  +F P  LE    +    A+   Q   LLL+   +  +++                  +  K  V++N+RFS S  ++  G  +GG                              A +R     VPMTPL+ PGV    P+MTWG+IE TP  +        G             FE++  + REK+A  LE++AR R    R
Sbjct:    6 VLEEEEYVEALGQIIERDFFPDL--------PKLKKQTKLLRGEEEGLPWTDTTLR---VASTSRGNVSVRSNISDSGWDQPTPVVEHS-------ADDQVQGEDSDDSAKT--SMTLNRFVATHTSEDNESFNELQEKAVKDHQRRYHWAFV-DDKEKGDPKLHLLTNGTWISKEQRQIADEACASKGPK--DYRPSAPETWKYRARNPLLF-PPELEATRDICQVKADPGDQ---LLLENSSKSQSKL----------------PPRPGKKTVYANSRFS-SDDIKLDGSESGG----------------------------NQASSRKDYSLVPMTPLIAPGVDAS-PLMTWGDIEGTPTNL--------GSQATSARLQNTPSFELKDTSQREKLASRLESEARHRNPTSR 339          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: ETL90425.1 (hypothetical protein L917_10894 [Phytophthora parasitica])

HSP 1 Score: 109.4 bits (272), Expect = 4.700e-20
Identity = 111/415 (26.75%), Postives = 176/415 (42.41%), Query Frame = 0
Query:   92 VLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMRRDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHR-KHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPLRVSEPFDYGGGXXXXXXXXGERKRFEIQGPTFREKVAGELEAKARTRGGKMR 506
            VL+E+ +V+A+G+IIERDFFP L                             + +R    A+                    TPV  +        +D  V   +S +S+ +   ++L++F+A   SED+ +F+ L E+  + H+R+Y W +   + E G  KL+LL +G  +++EQ +    A A+  P+  D RP+APETW  R +N  +F P  LE    +    A+   Q   LLL+   +  +++                  +  K  V++N+RFS S  ++  G  +GG                              A +R     VPMTPL+ PGV    P+MTWG+IE TP  +        G             FE++  + REK+A  LE++AR R    R
Sbjct:    6 VLEEEEYVEALGQIIERDFFPDL--------PKLKKQTKLLRGEEEGLPWTDTTLR---VASTSRGNVSVRSNISDSGWDQPTPVVEHS-------ADDQVQGEDSDDSAKT--SMTLNRFVATHTSEDNESFNELQEKAVKDHQRRYHWAFV-DDKEKGDPKLHLLTNGTWISKEQRQIADEACASKGPK--DYRPSAPETWKYRARNPLLF-PPELEATRDICQVKADPGDQ---LLLENSSKSQSKL----------------PPRPGKKTVYANSRFS-SDDIKLDGSESGG----------------------------NQASSRKDYSLVPMTPLIAPGVDAS-PLMTWGDIEGTPTNL--------GSQATSARLQNTPSFELKDTSQREKLASRLESEARHRNPTSR 339          
BLAST of NO02G04320 vs. NCBI_GenBank
Match: XP_008907426.1 (hypothetical protein PPTG_13474 [Phytophthora parasitica INRA-310] >ETN07050.1 hypothetical protein PPTG_13474 [Phytophthora parasitica INRA-310])

HSP 1 Score: 109.4 bits (272), Expect = 4.700e-20
Identity = 111/415 (26.75%), Postives = 176/415 (42.41%), Query Frame = 0
Query:   92 VLDEDTFVDAMGEIIERDFFPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXVQSEMRRDTFAADGXXXXXXXXXXXXXXXXASTPVTRNDQRYNTPRSDTSVLASNSGESSPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEAGKEKLYLLPSGEMMTEEQHR-KHVAAANAKPRLGDDRPNAPETWPSRPQNNFIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGNNFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASELSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIESTPLRVSEPFDYGGGXXXXXXXXGERKRFEIQGPTFREKVAGELEAKARTRGGKMR 506
            VL+E+ +V+A+G+IIERDFFP L                             + +R    A+                    TPV  +        +D  V   +S +S+ +   ++L++F+A   SED+ +F+ L E+  + H+R+Y W +   + E G  KL+LL +G  +++EQ +    A A+  P+  D RP+APETW  R +N  +F P  LE    +    A+   Q   LLL+   +  +++                  +  K  V++N+RFS S  ++  G  +GG                              A +R     VPMTPL+ PGV    P+MTWG+IE TP  +        G             FE++  + REK+A  LE++AR R    R
Sbjct:    6 VLEEEEYVEALGQIIERDFFPDL--------PKLKKQTKLLRGEEEGLPWTDTTLR---VASTSRGNVSVWSNISDSGWDQPTPVVEHS-------ADDQVQGEDSDDSAKT--SMTLNRFVATHTSEDNESFNELQEKAVKDHQRRYHWAFV-DDKEKGDPKLHLLTNGTWISKEQRQIADEACASKGPK--DYRPSAPETWKYRARNPLLF-PPELEATRDICQVKADPGDQ---LLLENSSKSQSKL----------------PPRPGKKTVYANSRFS-SDDIKLDGSESGG----------------------------NQASSRKDYSLVPMTPLIAPGVDAS-PLMTWGDIEGTPTNL--------GSQATSARLQNTPSFELKDTSQREKLASRLESEARHRNPTSR 339          
The following BLAST results are available for this feature:
BLAST of NO02G04320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30311.12.500e-11450.98Nuclear protein DGCR14 [Nannochloropsis gaditana][more]
OQR94390.19.100e-2427.62hypothetical protein ACHHYP_01404 [Achlya hypogyna... [more]
XP_008869232.12.900e-2226.35hypothetical protein H310_06092 [Aphanomyces invad... [more]
XP_008614183.17.200e-2127.46hypothetical protein SDRG_09992 [Saprolegnia dicli... [more]
XP_012209614.17.200e-2127.61hypothetical protein SPRG_14777 [Saprolegnia paras... [more]
XP_024572058.17.200e-2127.78Nuclear protein ES2 [Plasmopara halstedii] >CEG356... [more]
XP_012209390.12.700e-2026.82hypothetical protein SPRG_14731 [Saprolegnia paras... [more]
ETI43806.14.700e-2026.75hypothetical protein F443_11398 [Phytophthora para... [more]
ETL90425.14.700e-2026.75hypothetical protein L917_10894 [Phytophthora para... [more]
XP_008907426.14.700e-2026.75hypothetical protein PPTG_13474 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007094NSK007094Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04320.1NO02G04320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|149097gene_1021Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g45gene421Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04320.1NO02G04320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04320 ID=NO02G04320|Name=NO02G04320|organism=Nannochloropsis oceanica|type=gene|length=2415bp
ACAGGAGGACACCATGTCGATGGTGCCACGGGGGGGGCACGGGGCTGGGG
GGAATGGCAGCAAGGATGACCATCTTCTGCCAGCTCCTTCCCCCGTAGGA
TCAAGGGCCCTCGCCCAGGCGTACAAACGCGGCCTGCCTACGCCTAGTCC
CTTGCGGCGCATGGAGGATCCATGCGCGGACCACATCATGCCTTCCCGCA
ACGACAAGGGGAAAAAGGAGAAGCATGCCTTGATGCTTCCGCCGGCTGTC
CCACCATCCCGCACCAGACGCAAGACCCAGCCGCAAGTCTTGGACGAGGA
CACGTTTGTGGATGCTATGGGCGAAATTATCGAGCGCGATTTCTTTCCAA
GGCTGCCGCGGTTGCACCGTCAGATAAAATGGCTGGAGGCATTGGAGGCC
CGTCGCTTGCGGAGTTTGACAGAGGTGCGGCGGGTGGTACAATCGGAGAT
GCGACGTGACACCTTCGCTGCTGATGGTGGTGATGGTGGCCTTGAGGGAG
GAGACTCCTCCTCCTTTTCATCGGCAGCGTCCACTCCAGTGACTAGAAAT
GATCAGCGATATAATACTCCAAGGTCTGATACCTCTGTACTTGCCAGTAA
CAGCGGCGAGTCCTCCCCCTCGCCCTTACCCCTGTCCCTGGACCAATTCC
TCGCTCAGTTCCAAAGCGAAGACGACGCGGCATTCGACGTGCTCGCGGAA
CGAATGCGCGAAGCCCACCGTCGCAAATACTGGTGGATTTATTCTCATCC
CGAACTGGAAGCAGGGAAAGAAAAACTGTATCTCCTGCCGAGTGGAGAAA
TGATGACCGAGGAACAACATCGAAAGCACGTCGCAGCTGCCAATGCCAAG
CCACGATTGGGAGATGACAGGCCCAACGCCCCGGAGACATGGCCAAGCCG
TCCTCAGAATAATTTCATTTTTTACCCCGGGAGTTTAGAGGAGAATGCGA
AGGTGCACCTGAGGGGCGCCAATGCCGCGACACAGCCACAATTGCTGCTT
CTCAAGCAGGATGGGAGAGAGGGAACGAGGATGTTAACGGCAGGAGCAGG
AGTAGCCGGAAATAATTTTCGGGTGGGCCACGAGGGCAAAGCCCCCAAAA
TACTCGTGCACAGCAACACGCGTTTCTCCGCCTCCAAGCCCCTGGAATGG
AAAGGCGGGAGAACTGGAGGACCTGCAGGACGTGCTTCGCCTCTAGAGCG
ACTCGCCTCGGAACTGAGTACATTGTCTTCCGAAACTTCATTCTCAACCA
GTACACAAGGTGCTCAAGCCCGGGCTACAGAAGGTTTTGTGCCCATGACT
CCTCTACTGGTCCCGGGGGTGGGTGGAGATGTCCCGATAATGACGTGGGG
AGAGATTGAAAGCACGCCCCTGAGGGTCAGTGAGCCGTTTGATTATGGTG
GTGGTGGGGAAGGAGGAGGAGGGAGGGAGGGGGAAAGGAAAAGATTTGAG
ATCCAGGGTCCGACGTTTCGGGAGAAGGTGGCGGGGGAGTTGGAGGCCAA
GGCGAGGACGAGAGGGGGGAAGATGAGGGAGGGACGGAGGGAGGGTGGTG
GTGGGATGGGTAACGGCGCTGATAGTGTATATGCGTCGTCGTCGGGAGGA
AGAAGAGGTGGAATGAGCAGAAGCTCGTTCCTTACCAGCAGCAGCAGCAG
CAGTAGTAGTAGCAGTAGCAGCAGCAGCAGCAAGAAACGAGGGTTGGGCT
CGTTGACGCCTGCAGCGCAGATTTTGGCGGCTAAGCTGGCGGGTGGTGGT
AGTGGAGGAGGAGGAGGAGGAGGAGGAGGTGTGTTCGGAGGTGGAGCGTC
ATCACAGTTGCGGGCAAGCTATTCTGGATCGGTAGGCACGATAGATGGCA
GGGGAAGCAGTCGTCGTGTGGCTGGTTCGTCGATTCTGACCCCGAAACCT
TCGCCTTTACGGGCGTTGCCGAAACGGAGTAATGAGGAGGGGGGTCTTGA
TGGTGGTGCACGGCAAGGGGGGGGGGGGGGAGTGGTAGTAGTGGTCAAGG
TAGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGGGGGGAGGAGGAGA
CATGGGTGGTACTTCTGCAGGTGCTGTGGATGGAAAGAGCTATGGCAGGA
GCAAGGTGACGGAGAATTTACTCAATTTTTAGTCGGATGAGGCAGGCGGG
TACCTTTGTGCCATAGGGCGAGGAAGTGGTGTTGAGCGAGTAAAGGTTTC
AGTACACTCAAGAAGCTGATATGATGCCGGTCTGGAGGAAAGAAAAAGAT
TGTACAGGGAAGAAGGAGAGAGAGCAATGGTAATAATGTGTGACTGGATC
CACACAAATATCAGAAGCAGGTAGGCATAGACGCAGTAGTACAACGATTA
GATGCATGTATCCATAGCCATAACGAGCCAATGTAAGTTAAAAGAATTGG
AGACGTGAAGAGAAA
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protein sequence of NO02G04320.1

>NO02G04320.1-protein ID=NO02G04320.1-protein|Name=NO02G04320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp
MSMVPRGGHGAGGNGSKDDHLLPAPSPVGSRALAQAYKRGLPTPSPLRRM
EDPCADHIMPSRNDKGKKEKHALMLPPAVPPSRTRRKTQPQVLDEDTFVD
AMGEIIERDFFPRLPRLHRQIKWLEALEARRLRSLTEVRRVVQSEMRRDT
FAADGGDGGLEGGDSSSFSSAASTPVTRNDQRYNTPRSDTSVLASNSGES
SPSPLPLSLDQFLAQFQSEDDAAFDVLAERMREAHRRKYWWIYSHPELEA
GKEKLYLLPSGEMMTEEQHRKHVAAANAKPRLGDDRPNAPETWPSRPQNN
FIFYPGSLEENAKVHLRGANAATQPQLLLLKQDGREGTRMLTAGAGVAGN
NFRVGHEGKAPKILVHSNTRFSASKPLEWKGGRTGGPAGRASPLERLASE
LSTLSSETSFSTSTQGAQARATEGFVPMTPLLVPGVGGDVPIMTWGEIES
TPLRVSEPFDYGGGGEGGGGREGERKRFEIQGPTFREKVAGELEAKARTR
GGKMREGRREGGGGMGNGADSVYASSSGGRRGGMSRSSFLTSSSSSSSSS
SSSSSSKKRGLGSLTPAAQILAAKLAGGGSGGGGGGGGGVFGGGASSQLR
ASYSGSVGTIDGRGSSRRVAGSSILTPKPSPLRALPKRSNEEGGLDGGAR
QGGGGGVVVVVKVEEEEEKEEEEEGGRRRHGWYFCRCCGWKELWQEQGDG
EFTQFLVG*
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Synonyms
Publications