NO02G04310, NO02G04310 (gene) Nannochloropsis oceanica

Overview
NameNO02G04310
Unique NameNO02G04310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length948
Alignment locationchr2:1167074..1168021 +

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Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1167074..1168021 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO02G04310 vs. NCBI_GenBank
Match: EWM30308.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 391.7 bits (1005), Expect = 2.100e-105
Identity = 204/305 (66.89%), Postives = 242/305 (79.34%), Query Frame = 0
Query:   15 IARLHTSAAFGVQLHRRLSTVRMAIAS----HGIYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316
            + +LHTS+  GV   +  ST   + +S      IYIVTGSTDGIG+HTA+NL +    AK+ VHGRNPA+V +TV++L+  NP  ID VV DL SF DIRR+A +L  KI+A S DAP+ LINNAGVFE +RK S EGLEMTFAINVAAPFLLTGLLLPLL++RK+SRIINISSISQGGSIPW+DLQL+LPGA++DHR+YSLSKL MAM+SMEQS RFGS+E  IVCCDPGTVNTKMLEAGWGMYG+DVSAANDET LA    +   NG YFV +  R+AN+EAYD ++R +LW YLEE TGF Y
Sbjct:   25 VIQLHTSSIIGVSA-KSSSTGSSSRSSTRMLEKIYIVTGSTDGIGQHTASNLINT-PDAKLLVHGRNPAKVAQTVQQLKSVNPGDIDGVVADLASFQDIRRLAKDLEEKIEAASPDAPVVLINNAGVFETRRKESPEGLEMTFAINVAAPFLLTGLLLPLLRRRKNSRIINISSISQGGSIPWDDLQLALPGAYTDHRAYSLSKLCMAMLSMEQSSRFGSAEFPIVCCDPGTVNTKMLEAGWGMYGVDVSAANDETLLALAPSLD--NGSYFVGRMARKANAEAYDPKSRARLWQYLEEVTGFAY 325          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_005842049.1 (hypothetical protein GUITHDRAFT_63155 [Guillardia theta CCMP2712] >EKX55069.1 hypothetical protein GUITHDRAFT_63155 [Guillardia theta CCMP2712])

HSP 1 Score: 213.4 bits (542), Expect = 1.000e-51
Identity = 122/279 (43.73%), Postives = 170/279 (60.93%), Query Frame = 0
Query:   37 MAIASHGIYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDG-IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGS--SELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTG 313
            M+ + + I +VTGSTDGIG+HTA  LA  G +  V +HGRNP R+   +  ++ + P+  + S   D     D+R++  E+ +K + +       LINNAGV+E+  K +V+G EMTF +NV A FLLT LL+  + K +  RII  SSISQG SI +++  L++   FS H SYSLSKL  AM ++E ++R       + +   DPGTVNTKML AGWGM GIDV  AN+E  LATD  +   +G YFV     +A+   YD + R KLW  +E+ TG
Sbjct:    1 MSSSLNKIALVTGSTDGIGRHTALKLAQEGYE--VIIHGRNPKRIEDALAFIKSKCPNAHLQSFQADFARLDDVRKLGNEIASKYQCID-----VLINNAGVYEESMKKTVDGFEMTFQVNVLAGFLLTTLLMDTVAKAEEPRIIITSSISQGSSIDFDN--LNMEKGFSSHGSYSLSKLCNAMHAIELAERMKKRHPHVTVNTLDPGTVNTKMLLAGWGMCGIDVERANNEFNLATDASLKGKSGLYFVGGRETKASRPCYDKDQRLKLWKRMEDMTG 270          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_011673520.1 (PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogenase 13-like [Strongylocentrotus purpuratus])

HSP 1 Score: 209.1 bits (531), Expect = 1.900e-50
Identity = 120/273 (43.96%), Postives = 168/273 (61.54%), Query Frame = 0
Query:   44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQ-RNPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316
            I++VTG+T+GIG+ TA  L+  G    V VHGR  ARV  TV ++++    + I   + DL   A+IRR++ EL A  K +       LINNAGV+E+KR+ S +G E+TFA+NV APFLLT LLL LL+    SRI+N+SSISQ   +  ++LQL       D ++Y  SKL   M +++ ++RF    + + C DPGTVNT+ML   WG  GI    A++E +LATD K  ++ G YFV     RA++ AYD + R KLW +L + TG  Y
Sbjct:    5 IFLVTGATNGIGQDTALQLSKTG--GTVLVHGRALARVEATVADIKKATGNENIKGYIADLACLANIRRLSDELHASQKHID-----VLINNAGVYEKKRQESNDGYELTFAVNVMAPFLLTSLLLDLLKAGNKSRIVNVSSISQSSFLDLDNLQLKHDYGKGD-KAYEQSKLCDIMFTIDMAERFRKDGITVNCLDPGTVNTQMLLKVWGAIGIPTDEADNEFHLATDAKFEDVTGEYFVDMRKTRASAVAYDNQLRGKLWKHLVDITGAQY 269          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_002742225.1 (PREDICTED: retinol dehydrogenase 14-like [Saccoglossus kowalevskii] >APU50777.1 retinol dehydrogenase 14-like protein 094 [Saccoglossus kowalevskii])

HSP 1 Score: 203.4 bits (516), Expect = 1.100e-48
Identity = 123/275 (44.73%), Postives = 163/275 (59.27%), Query Frame = 0
Query:   44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQR--NPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQK-RKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316
            +Y++TGSTDGIGKHTA  LA  G    V VHGRN A+  K VEEL+    NP+ I+    D  S   IR+++ E+  +   +       LINNAGV+E +R  S EG EMT A+NV APFLLT LLL L+ K R  SRI+ +SS++Q  +I + +LQ      +S   +Y LSKL   + S E SDR     + + CCDPGTVNT ML   +G  GI +  A++E YLATD K   + G YFV      + S +YD + RR+LW  +E+ TG  Y
Sbjct:    7 VYLITGSTDGIGKHTALRLAQAG--GTVLVHGRNRAKGEKVVEELKTATGNPN-IELFTADFSSLDHIRQMSREVHERHSRID-----VLINNAGVWENQRILSQEGYEMTLAVNVLAPFLLTSLLLDLIPKGRVDSRILIVSSMTQAYNIDFSNLQFERD--YSGFAAYGLSKLCDIVFSYELSDRLRPLGIIVNCCDPGTVNTNMLMKSYGPIGIPIEQADNEFYLATDPKFTGVTGKYFVQLQDTSSASISYDIKTRRRLWQIMEQMTGATY 271          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: PRW20919.1 (short chain dehydrogenase reductase family [Chlorella sorokiniana])

HSP 1 Score: 200.7 bits (509), Expect = 6.900e-48
Identity = 126/277 (45.49%), Postives = 161/277 (58.12%), Query Frame = 0
Query:   45 YIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRN-------PDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRF--GSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTG 313
            + VTG+TDGIG HTA  LA++G  A V VHGRNP RV + V  + +         P G    V DL S A +RR+A E+     A S  +   LINNAGVFEQ+ + S +G E+T+A+NVAAPFLLT  LL  +++    R++ +SSIS   SI W +LQ      FS H +YSLSKL   + + E +DR     S +   C DPGTVNTKML AGWG  GI V  AN E   ATD  +   +G YFV     R  S A D   +++LW  LEE+TG
Sbjct:   10 FFVTGATDGIGAHTAQRLAAQG--ATVLVHGRNPGRVEQAVAAVERAGSGSGGAPPRGF---VADLASLAQVRRLAEEV-----AASSPSVDVLINNAGVFEQQLRKSEDGFELTWAVNVAAPFLLTACLLEAVRE----RVVVVSSISAASSIDWGNLQQE--RGFSAHNAYSLSKLAEQLFTFELADRLRAAGSPVTCNCLDPGTVNTKMLSAGWGSIGIPVKEANYELKAATDPALAGTSGEYFVGGRIARPPSIARDKAEQQRLWRLLEEQTG 270          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: CEM00874.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 191.0 bits (484), Expect = 5.500e-45
Identity = 126/316 (39.87%), Postives = 178/316 (56.33%), Query Frame = 0
Query:    4 LLLLAISSVFLIARLHTSAAFGVQLHRRLSTVRMAIASHG-IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEEL-RQRNPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLAT--DQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316
            L+L  +S   L +     +AF +       +   A A  G IY++TGSTDGIG+HTA  LA+      V +HGR+P R+     EL R      I + + DL    ++  +A+E++     +       LINNAGVFE++R+ + + +E+TFA+NVAAP++LT  LL  +      RII  SSISQG  I   +LQL+    +SDH +YSLSKL   ++++E +DR  S  +     DPGTVNTKML AGWG  GIDVS A++  +LAT  D  V +  G YFVS+     +  A DG  R   W+ +E+ TG  Y
Sbjct:    3 LVLRLLSVASLSSHRLPVSAFRLYSSPLTMSAAAANAEQGKIYLITGSTDGIGRHTAHRLAAANKDNTVIIHGRSPERLEAAKAELVRATKNINIFAYLADLSVMRNVEALASEIKKHHPRID-----VLINNAGVFEERRQETPDAMELTFAVNVAAPYVLTRHLLDCIPDNT-GRIIITSSISQGSRIDLNNLQLNT--GYSDHAAYSLSKLCDVLLTVEIADRLKSRGIVCHTQDPGTVNTKMLLAGWGPCGIDVSVADNTFWLATSNDPHVVKETGNYFVSRRLSTPSGPAGDGSVRAAFWAQMEQLTGVKY 310          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_002178137.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50951.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 189.1 bits (479), Expect = 2.100e-44
Identity = 122/277 (44.04%), Postives = 161/277 (58.12%), Query Frame = 0
Query:   46 IVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELR----QRNPDG---IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSI-PWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDR-----FGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEE 310
            +VTGSTDGIG  TA N+ASRG    V +HGR   R+ +  + +     Q + D          D  S  +    A ++R   K       + L+NNAGV+ +K   + +GLE TFA+NV APF++T LLLP L ++K SRI+  SSISQ G I  W+DL      ++S   SYS SKLL AM+SME +DR     FG++++   C DPGTVNTKML AGWG  GI V  A D+T+L T ++V    G YFV +  R A S AYD   R K+W+ L E
Sbjct:   79 LVTGSTDGIGLTTAKNVASRGYD--VIIHGRETTRLDQARKAVHAYAVQHSSDPGRLFPLPPADFSSIRECHGFAHDVRNLCKEKDLQLCV-LMNNAGVYSEKHIITEDGLEQTFAVNVVAPFIVTSLLLPTLLQQK-SRIVIASSISQCGKIRSWKDLHYQ-NRSYSADASYSESKLLDAMLSMEMADRLQKAGFGTNQITCNCLDPGTVNTKMLLAGWGACGIHVEDALDQTWLCTSEEVENETGKYFVYQKDRSAQSSAYDQNERNKMWALLSE 350          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: PIK37445.1 (putative retinol dehydrogenase 13-like, partial [Apostichopus japonicus])

HSP 1 Score: 188.3 bits (477), Expect = 3.500e-44
Identity = 110/269 (40.89%), Postives = 155/269 (57.62%), Query Frame = 0
Query:   45 YIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPD-GIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTG 313
            +++TGSTDGIGKHTA  +A  G  A V VHGR+P RV  T  E++Q++ +  +   V D  S   +R+++ ++     +L       LINNAGV E KR  SV+G EMTFA+NV +PF LT LLL LL+K    R+IN++SISQ   I ++DLQ  +    +   +Y LSKL   M +   +++F    + +   DPGTVNTKML   WG  G+ V  A  E  LAT      + G YFV      ++  +YD + ++KLW  L + TG
Sbjct:   17 FLITGSTDGIGKHTAHLIAKLG--ATVLVHGRSPERVQLTQLEIQQQSGNANVHGYVADFASLEGVRQLSRDIHQNHSSLD-----VLINNAGVLETKRMESVDGYEMTFAVNVLSPFYLTSLLLDLLKKGNAPRLINVASISQACRIDFDDLQFQM-NYGNGVPAYELSKLCNIMFTYMMAEKFQPCGMTVNTLDPGTVNTKMLLKSWGSIGVSVEEAGYEYNLATSSAYDNVTGKYFVYNQDAMSSHVSYDKKKQQKLWDILVKMTG 277          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_008858402.1 (oxidoreductase, short chain dehydrogenase/reductase family protein [Entamoeba nuttalli P19] >EKE39262.1 oxidoreductase, short chain dehydrogenase/reductase family protein [Entamoeba nuttalli P19])

HSP 1 Score: 188.0 bits (476), Expect = 4.600e-44
Identity = 117/274 (42.70%), Postives = 165/274 (60.22%), Query Frame = 0
Query:   44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDG-IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQL-SLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316
            +  VTGSTDGIG  TAT LA  G   KV VHGR   +V K +  ++ + P+  +D VV DL S    + +   + +K + L       L+NNAGVF  +R+ SV+G EMT A+NV APF++T  LLPL++K ++SR+I + SISQ     + DL L      +  +R+Y  SKL +   + E ++R+   +L I   DPGTVNTKML   WG  GI+V  ANDE +LAT++ + ++ G YFV+K   +A  +AYD   R+KL+  LEE TG  Y
Sbjct:    8 VAFVTGSTDGIGLFTATKLAHDG--YKVIVHGRTQDKVEKAMGSIQSQIPEADLDFVVCDLQSIEKTKMMCDLILSKYQRLD-----LLLNNAGVFLLERQESVDGHEMTLAVNVLAPFIITFKLLPLIRKTQNSRVIEVGSISQPS---YMDLDLIEHKDNYDGYRAYDYSKLSVIAFTFELTERY--PDLWINTLDPGTVNTKMLLLSWGKCGIEVGEANDEYWLATNEDLQKVRGKYFVNKVEEKAEKQAYDLNFRKKLFLKLEEITGIKY 269          
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_649916.1 (oxidoreductase, short chain dehydrogenase/reductase family [Entamoeba histolytica HM-1:IMSS] >EAL44530.1 oxidoreductase, short chain dehydrogenase/reductase family [Entamoeba histolytica HM-1:IMSS] >EMS17863.1 oxidoreductase, short chain dehydrogenase/reductase family protein [Entamoeba histolytica HM-3:IMSS] >ENY65963.1 oxidoreductase, short chain dehydrogenase/reductase family protein, putative [Entamoeba histolytica HM-1:IMSS-A] >GAT98260.1 oxidoreductase short chain dehydrogenase reductase family [Entamoeba histolytica])

HSP 1 Score: 187.6 bits (475), Expect = 6.000e-44
Identity = 118/274 (43.07%), Postives = 165/274 (60.22%), Query Frame = 0
Query:   44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDG-IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQL-SLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316
            +  VTGSTDGIG  TAT LA  G   KV VHGR   +V K +  ++ + P+  +D VV DL S    + +   L +K + L       L+NNAGVF  +R+ SV+G EMT A+NV APF++T  LLPL++K ++SR+I + SISQ     + DL L      +  +R+Y  SKL +   + E ++R+   +L I   DPGTVNTKML   WG  GI+V  ANDE +LAT++ + ++ G YFV+K   +A  +AYD   R+KL+  LEE TG  Y
Sbjct:    8 VAFVTGSTDGIGLFTATKLAHDG--YKVIVHGRTQEKVEKAMGIIQSQIPEADLDFVVCDLQSIEKTKMMCDLLLSKYQRLD-----LLLNNAGVFLLERQDSVDGHEMTLAVNVLAPFIITFKLLPLIRKTQNSRVIEVGSISQPS---YMDLDLIEHKDNYDGYRAYDYSKLSVIAFTFELTERY--PDLWINTLDPGTVNTKMLLLSWGKCGIEVGEANDEYWLATNEDLQKVRGKYFVNKVEEKAEKQAYDLNFRKKLFLKLEEITGIKY 269          
The following BLAST results are available for this feature:
BLAST of NO02G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30308.12.100e-10566.89short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005842049.11.000e-5143.73hypothetical protein GUITHDRAFT_63155 [Guillardia ... [more]
XP_011673520.11.900e-5043.96PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogen... [more]
XP_002742225.11.100e-4844.73PREDICTED: retinol dehydrogenase 14-like [Saccoglo... [more]
PRW20919.16.900e-4845.49short chain dehydrogenase reductase family [Chlore... [more]
CEM00874.15.500e-4539.87unnamed protein product [Vitrella brassicaformis C... [more]
XP_002178137.12.100e-4444.04predicted protein [Phaeodactylum tricornutum CCAP ... [more]
PIK37445.13.500e-4440.89putative retinol dehydrogenase 13-like, partial [A... [more]
XP_008858402.14.600e-4442.70oxidoreductase, short chain dehydrogenase/reductas... [more]
XP_649916.16.000e-4443.07oxidoreductase, short chain dehydrogenase/reductas... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007093NSK007093Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04310.1NO02G04310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575045gene_1020Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g46gene420Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04310.1NO02G04310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04310 ID=NO02G04310|Name=NO02G04310|organism=Nannochloropsis oceanica|type=gene|length=948bp
ATGAAGCCGCTTCTGCTGCTCGCTATAAGCTCCGTCTTTCTTATTGCTCG
CCTGCACACCTCTGCTGCCTTTGGAGTTCAACTCCACCGCCGACTTTCGA
CAGTGCGCATGGCTATAGCTTCCCACGGCATCTACATCGTCACTGGTTCG
ACAGATGGTATCGGCAAGCACACAGCCACCAACCTGGCCTCTCGAGGAGC
CCAAGCCAAAGTTTTCGTCCACGGACGTAACCCGGCACGGGTTACCAAGA
CGGTAGAGGAACTAAGGCAGCGCAACCCTGATGGGATCGACAGCGTGGTA
GGCGACTTGGGTTCCTTCGCAGACATCAGGCGTGTAGCTGCCGAGCTACG
GGCCAAAATCAAGGCCTTGTCGGGCGATGCACCTATCACACTCATCAATA
ATGCAGGGGTATTCGAGCAGAAGCGCAAGGCTTCGGTGGAGGGGCTTGAA
ATGACTTTCGCCATCAACGTTGCTGCCCCCTTTCTACTGACGGGGTTGCT
GCTCCCTCTATTGCAAAAGCGAAAGCACAGCCGGATCATCAACATTTCCT
CCATTTCTCAAGGTGGTAGTATACCATGGGAGGATCTACAATTGTCATTA
CCAGGAGCATTCAGTGATCATAGGAGCTATTCGCTGAGCAAACTATTGAT
GGCCATGGTAAGTATGGAGCAAAGCGACCGCTTTGGTTCCTCTGAATTAG
CTATTGTATGCTGTGACCCCGGCACTGTCAACACCAAAATGCTCGAAGCC
GGATGGGGCATGTATGGCATTGATGTGTCCGCTGCGAATGATGAAACGTA
TCTGGCGACAGACCAGAAGGTTGGTGAGATGAATGGTTGTTATTTTGTAA
GTAAGACGCCGCGGAGGGCAAATTCTGAAGCATATGATGGGGAGGCAAGG
AGGAAATTGTGGTCGTATTTGGAGGAGAAGACAGGATTTATTTACTAG
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protein sequence of NO02G04310.1

>NO02G04310.1-protein ID=NO02G04310.1-protein|Name=NO02G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=316bp
MKPLLLLAISSVFLIARLHTSAAFGVQLHRRLSTVRMAIASHGIYIVTGS
TDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDGIDSVV
GDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLE
MTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSL
PGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEA
GWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEAR
RKLWSYLEEKTGFIY*
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