NO02G04310, NO02G04310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04310 vs. NCBI_GenBank
Match: EWM30308.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 391.7 bits (1005), Expect = 2.100e-105 Identity = 204/305 (66.89%), Postives = 242/305 (79.34%), Query Frame = 0 Query: 15 IARLHTSAAFGVQLHRRLSTVRMAIAS----HGIYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316 + +LHTS+ GV + ST + +S IYIVTGSTDGIG+HTA+NL + AK+ VHGRNPA+V +TV++L+ NP ID VV DL SF DIRR+A +L KI+A S DAP+ LINNAGVFE +RK S EGLEMTFAINVAAPFLLTGLLLPLL++RK+SRIINISSISQGGSIPW+DLQL+LPGA++DHR+YSLSKL MAM+SMEQS RFGS+E IVCCDPGTVNTKMLEAGWGMYG+DVSAANDET LA + NG YFV + R+AN+EAYD ++R +LW YLEE TGF Y Sbjct: 25 VIQLHTSSIIGVSA-KSSSTGSSSRSSTRMLEKIYIVTGSTDGIGQHTASNLINT-PDAKLLVHGRNPAKVAQTVQQLKSVNPGDIDGVVADLASFQDIRRLAKDLEEKIEAASPDAPVVLINNAGVFETRRKESPEGLEMTFAINVAAPFLLTGLLLPLLRRRKNSRIINISSISQGGSIPWDDLQLALPGAYTDHRAYSLSKLCMAMLSMEQSSRFGSAEFPIVCCDPGTVNTKMLEAGWGMYGVDVSAANDETLLALAPSLD--NGSYFVGRMARKANAEAYDPKSRARLWQYLEEVTGFAY 325
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_005842049.1 (hypothetical protein GUITHDRAFT_63155 [Guillardia theta CCMP2712] >EKX55069.1 hypothetical protein GUITHDRAFT_63155 [Guillardia theta CCMP2712]) HSP 1 Score: 213.4 bits (542), Expect = 1.000e-51 Identity = 122/279 (43.73%), Postives = 170/279 (60.93%), Query Frame = 0 Query: 37 MAIASHGIYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDG-IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGS--SELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTG 313 M+ + + I +VTGSTDGIG+HTA LA G + V +HGRNP R+ + ++ + P+ + S D D+R++ E+ +K + + LINNAGV+E+ K +V+G EMTF +NV A FLLT LL+ + K + RII SSISQG SI +++ L++ FS H SYSLSKL AM ++E ++R + + DPGTVNTKML AGWGM GIDV AN+E LATD + +G YFV +A+ YD + R KLW +E+ TG Sbjct: 1 MSSSLNKIALVTGSTDGIGRHTALKLAQEGYE--VIIHGRNPKRIEDALAFIKSKCPNAHLQSFQADFARLDDVRKLGNEIASKYQCID-----VLINNAGVYEESMKKTVDGFEMTFQVNVLAGFLLTTLLMDTVAKAEEPRIIITSSISQGSSIDFDN--LNMEKGFSSHGSYSLSKLCNAMHAIELAERMKKRHPHVTVNTLDPGTVNTKMLLAGWGMCGIDVERANNEFNLATDASLKGKSGLYFVGGRETKASRPCYDKDQRLKLWKRMEDMTG 270
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_011673520.1 (PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogenase 13-like [Strongylocentrotus purpuratus]) HSP 1 Score: 209.1 bits (531), Expect = 1.900e-50 Identity = 120/273 (43.96%), Postives = 168/273 (61.54%), Query Frame = 0 Query: 44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQ-RNPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316 I++VTG+T+GIG+ TA L+ G V VHGR ARV TV ++++ + I + DL A+IRR++ EL A K + LINNAGV+E+KR+ S +G E+TFA+NV APFLLT LLL LL+ SRI+N+SSISQ + ++LQL D ++Y SKL M +++ ++RF + + C DPGTVNT+ML WG GI A++E +LATD K ++ G YFV RA++ AYD + R KLW +L + TG Y Sbjct: 5 IFLVTGATNGIGQDTALQLSKTG--GTVLVHGRALARVEATVADIKKATGNENIKGYIADLACLANIRRLSDELHASQKHID-----VLINNAGVYEKKRQESNDGYELTFAVNVMAPFLLTSLLLDLLKAGNKSRIVNVSSISQSSFLDLDNLQLKHDYGKGD-KAYEQSKLCDIMFTIDMAERFRKDGITVNCLDPGTVNTQMLLKVWGAIGIPTDEADNEFHLATDAKFEDVTGEYFVDMRKTRASAVAYDNQLRGKLWKHLVDITGAQY 269
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_002742225.1 (PREDICTED: retinol dehydrogenase 14-like [Saccoglossus kowalevskii] >APU50777.1 retinol dehydrogenase 14-like protein 094 [Saccoglossus kowalevskii]) HSP 1 Score: 203.4 bits (516), Expect = 1.100e-48 Identity = 123/275 (44.73%), Postives = 163/275 (59.27%), Query Frame = 0 Query: 44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQR--NPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQK-RKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316 +Y++TGSTDGIGKHTA LA G V VHGRN A+ K VEEL+ NP+ I+ D S IR+++ E+ + + LINNAGV+E +R S EG EMT A+NV APFLLT LLL L+ K R SRI+ +SS++Q +I + +LQ +S +Y LSKL + S E SDR + + CCDPGTVNT ML +G GI + A++E YLATD K + G YFV + S +YD + RR+LW +E+ TG Y Sbjct: 7 VYLITGSTDGIGKHTALRLAQAG--GTVLVHGRNRAKGEKVVEELKTATGNPN-IELFTADFSSLDHIRQMSREVHERHSRID-----VLINNAGVWENQRILSQEGYEMTLAVNVLAPFLLTSLLLDLIPKGRVDSRILIVSSMTQAYNIDFSNLQFERD--YSGFAAYGLSKLCDIVFSYELSDRLRPLGIIVNCCDPGTVNTNMLMKSYGPIGIPIEQADNEFYLATDPKFTGVTGKYFVQLQDTSSASISYDIKTRRRLWQIMEQMTGATY 271
BLAST of NO02G04310 vs. NCBI_GenBank
Match: PRW20919.1 (short chain dehydrogenase reductase family [Chlorella sorokiniana]) HSP 1 Score: 200.7 bits (509), Expect = 6.900e-48 Identity = 126/277 (45.49%), Postives = 161/277 (58.12%), Query Frame = 0 Query: 45 YIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRN-------PDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRF--GSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTG 313 + VTG+TDGIG HTA LA++G A V VHGRNP RV + V + + P G V DL S A +RR+A E+ A S + LINNAGVFEQ+ + S +G E+T+A+NVAAPFLLT LL +++ R++ +SSIS SI W +LQ FS H +YSLSKL + + E +DR S + C DPGTVNTKML AGWG GI V AN E ATD + +G YFV R S A D +++LW LEE+TG Sbjct: 10 FFVTGATDGIGAHTAQRLAAQG--ATVLVHGRNPGRVEQAVAAVERAGSGSGGAPPRGF---VADLASLAQVRRLAEEV-----AASSPSVDVLINNAGVFEQQLRKSEDGFELTWAVNVAAPFLLTACLLEAVRE----RVVVVSSISAASSIDWGNLQQE--RGFSAHNAYSLSKLAEQLFTFELADRLRAAGSPVTCNCLDPGTVNTKMLSAGWGSIGIPVKEANYELKAATDPALAGTSGEYFVGGRIARPPSIARDKAEQQRLWRLLEEQTG 270
BLAST of NO02G04310 vs. NCBI_GenBank
Match: CEM00874.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 191.0 bits (484), Expect = 5.500e-45 Identity = 126/316 (39.87%), Postives = 178/316 (56.33%), Query Frame = 0 Query: 4 LLLLAISSVFLIARLHTSAAFGVQLHRRLSTVRMAIASHG-IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEEL-RQRNPDGIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLAT--DQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316 L+L +S L + +AF + + A A G IY++TGSTDGIG+HTA LA+ V +HGR+P R+ EL R I + + DL ++ +A+E++ + LINNAGVFE++R+ + + +E+TFA+NVAAP++LT LL + RII SSISQG I +LQL+ +SDH +YSLSKL ++++E +DR S + DPGTVNTKML AGWG GIDVS A++ +LAT D V + G YFVS+ + A DG R W+ +E+ TG Y Sbjct: 3 LVLRLLSVASLSSHRLPVSAFRLYSSPLTMSAAAANAEQGKIYLITGSTDGIGRHTAHRLAAANKDNTVIIHGRSPERLEAAKAELVRATKNINIFAYLADLSVMRNVEALASEIKKHHPRID-----VLINNAGVFEERRQETPDAMELTFAVNVAAPYVLTRHLLDCIPDNT-GRIIITSSISQGSRIDLNNLQLNT--GYSDHAAYSLSKLCDVLLTVEIADRLKSRGIVCHTQDPGTVNTKMLLAGWGPCGIDVSVADNTFWLATSNDPHVVKETGNYFVSRRLSTPSGPAGDGSVRAAFWAQMEQLTGVKY 310
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_002178137.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50951.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 189.1 bits (479), Expect = 2.100e-44 Identity = 122/277 (44.04%), Postives = 161/277 (58.12%), Query Frame = 0 Query: 46 IVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELR----QRNPDG---IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSI-PWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDR-----FGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEE 310 +VTGSTDGIG TA N+ASRG V +HGR R+ + + + Q + D D S + A ++R K + L+NNAGV+ +K + +GLE TFA+NV APF++T LLLP L ++K SRI+ SSISQ G I W+DL ++S SYS SKLL AM+SME +DR FG++++ C DPGTVNTKML AGWG GI V A D+T+L T ++V G YFV + R A S AYD R K+W+ L E Sbjct: 79 LVTGSTDGIGLTTAKNVASRGYD--VIIHGRETTRLDQARKAVHAYAVQHSSDPGRLFPLPPADFSSIRECHGFAHDVRNLCKEKDLQLCV-LMNNAGVYSEKHIITEDGLEQTFAVNVVAPFIVTSLLLPTLLQQK-SRIVIASSISQCGKIRSWKDLHYQ-NRSYSADASYSESKLLDAMLSMEMADRLQKAGFGTNQITCNCLDPGTVNTKMLLAGWGACGIHVEDALDQTWLCTSEEVENETGKYFVYQKDRSAQSSAYDQNERNKMWALLSE 350
BLAST of NO02G04310 vs. NCBI_GenBank
Match: PIK37445.1 (putative retinol dehydrogenase 13-like, partial [Apostichopus japonicus]) HSP 1 Score: 188.3 bits (477), Expect = 3.500e-44 Identity = 110/269 (40.89%), Postives = 155/269 (57.62%), Query Frame = 0 Query: 45 YIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPD-GIDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQLSLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTG 313 +++TGSTDGIGKHTA +A G A V VHGR+P RV T E++Q++ + + V D S +R+++ ++ +L LINNAGV E KR SV+G EMTFA+NV +PF LT LLL LL+K R+IN++SISQ I ++DLQ + + +Y LSKL M + +++F + + DPGTVNTKML WG G+ V A E LAT + G YFV ++ +YD + ++KLW L + TG Sbjct: 17 FLITGSTDGIGKHTAHLIAKLG--ATVLVHGRSPERVQLTQLEIQQQSGNANVHGYVADFASLEGVRQLSRDIHQNHSSLD-----VLINNAGVLETKRMESVDGYEMTFAVNVLSPFYLTSLLLDLLKKGNAPRLINVASISQACRIDFDDLQFQM-NYGNGVPAYELSKLCNIMFTYMMAEKFQPCGMTVNTLDPGTVNTKMLLKSWGSIGVSVEEAGYEYNLATSSAYDNVTGKYFVYNQDAMSSHVSYDKKKQQKLWDILVKMTG 277
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_008858402.1 (oxidoreductase, short chain dehydrogenase/reductase family protein [Entamoeba nuttalli P19] >EKE39262.1 oxidoreductase, short chain dehydrogenase/reductase family protein [Entamoeba nuttalli P19]) HSP 1 Score: 188.0 bits (476), Expect = 4.600e-44 Identity = 117/274 (42.70%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDG-IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQL-SLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316 + VTGSTDGIG TAT LA G KV VHGR +V K + ++ + P+ +D VV DL S + + + +K + L L+NNAGVF +R+ SV+G EMT A+NV APF++T LLPL++K ++SR+I + SISQ + DL L + +R+Y SKL + + E ++R+ +L I DPGTVNTKML WG GI+V ANDE +LAT++ + ++ G YFV+K +A +AYD R+KL+ LEE TG Y Sbjct: 8 VAFVTGSTDGIGLFTATKLAHDG--YKVIVHGRTQDKVEKAMGSIQSQIPEADLDFVVCDLQSIEKTKMMCDLILSKYQRLD-----LLLNNAGVFLLERQESVDGHEMTLAVNVLAPFIITFKLLPLIRKTQNSRVIEVGSISQPS---YMDLDLIEHKDNYDGYRAYDYSKLSVIAFTFELTERY--PDLWINTLDPGTVNTKMLLLSWGKCGIEVGEANDEYWLATNEDLQKVRGKYFVNKVEEKAEKQAYDLNFRKKLFLKLEEITGIKY 269
BLAST of NO02G04310 vs. NCBI_GenBank
Match: XP_649916.1 (oxidoreductase, short chain dehydrogenase/reductase family [Entamoeba histolytica HM-1:IMSS] >EAL44530.1 oxidoreductase, short chain dehydrogenase/reductase family [Entamoeba histolytica HM-1:IMSS] >EMS17863.1 oxidoreductase, short chain dehydrogenase/reductase family protein [Entamoeba histolytica HM-3:IMSS] >ENY65963.1 oxidoreductase, short chain dehydrogenase/reductase family protein, putative [Entamoeba histolytica HM-1:IMSS-A] >GAT98260.1 oxidoreductase short chain dehydrogenase reductase family [Entamoeba histolytica]) HSP 1 Score: 187.6 bits (475), Expect = 6.000e-44 Identity = 118/274 (43.07%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 44 IYIVTGSTDGIGKHTATNLASRGAQAKVFVHGRNPARVTKTVEELRQRNPDG-IDSVVGDLGSFADIRRVAAELRAKIKALSGDAPITLINNAGVFEQKRKASVEGLEMTFAINVAAPFLLTGLLLPLLQKRKHSRIINISSISQGGSIPWEDLQL-SLPGAFSDHRSYSLSKLLMAMVSMEQSDRFGSSELAIVCCDPGTVNTKMLEAGWGMYGIDVSAANDETYLATDQKVGEMNGCYFVSKTPRRANSEAYDGEARRKLWSYLEEKTGFIY 316 + VTGSTDGIG TAT LA G KV VHGR +V K + ++ + P+ +D VV DL S + + L +K + L L+NNAGVF +R+ SV+G EMT A+NV APF++T LLPL++K ++SR+I + SISQ + DL L + +R+Y SKL + + E ++R+ +L I DPGTVNTKML WG GI+V ANDE +LAT++ + ++ G YFV+K +A +AYD R+KL+ LEE TG Y Sbjct: 8 VAFVTGSTDGIGLFTATKLAHDG--YKVIVHGRTQEKVEKAMGIIQSQIPEADLDFVVCDLQSIEKTKMMCDLLLSKYQRLD-----LLLNNAGVFLLERQDSVDGHEMTLAVNVLAPFIITFKLLPLIRKTQNSRVIEVGSISQPS---YMDLDLIEHKDNYDGYRAYDYSKLSVIAFTFELTERY--PDLWINTLDPGTVNTKMLLLSWGKCGIEVGEANDEYWLATNEDLQKVRGKYFVNKVEEKAEKQAYDLNFRKKLFLKLEEITGIKY 269 The following BLAST results are available for this feature:
BLAST of NO02G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04310 ID=NO02G04310|Name=NO02G04310|organism=Nannochloropsis oceanica|type=gene|length=948bpback to top protein sequence of NO02G04310.1 >NO02G04310.1-protein ID=NO02G04310.1-protein|Name=NO02G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=316bpback to top Synonyms
Publications
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