NO02G04070, NO02G04070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04070 vs. NCBI_GenBank
Match: EWM30356.1 (subunit of proteaseome activator complex [Nannochloropsis gaditana]) HSP 1 Score: 364.8 bits (935), Expect = 2.200e-97 Identity = 213/250 (85.20%), Postives = 224/250 (89.60%), Query Frame = 0 Query: 1 MSSLLSNELLKMENDAVLPPESEVTP---VIHPIPTTSEXXXXXXXXXXXXXXXXXXXXXXDVAVAHT-AIAHSDSEEESEDEMGHLNGRHVHAHWDYTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLSTKNQSFGSHMTI 247 ++SLL NELL++ENDAVLPPESEVTP XXXXXXXXXXXXXXXXXXXXXX AH A +HSDSEEESEDE+GHLNGRH HAHWDYTHDFAVPCNKTI+KVIELLRKEWKEA+ELVG VKLWIQLSIPPIESGGQFHVGVQEE +QELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSV+DYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLS K+QSFGS MTI Sbjct: 37 LTSLLENELLRLENDAVLPPESEVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAHVDAPSHSDSEEESEDEIGHLNGRHGHAHWDYTHDFAVPCNKTIMKVIELLRKEWKEAVELVGCVKLWIQLSIPPIESGGQFHVGVQEEVIQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVYDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLSIKDQSFGSRMTI 286
BLAST of NO02G04070 vs. NCBI_GenBank
Match: XP_012647695.1 (proteasome activator subunit 2 (PA28 beta) [Babesia microti strain RI] >CCF73086.1 proteasome activator subunit 2 (PA28 beta) [Babesia microti strain RI]) HSP 1 Score: 136.7 bits (343), Expect = 9.500e-29 Identity = 65/150 (43.33%), Postives = 103/150 (68.67%), Query Frame = 0 Query: 97 DFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 + VP ++ I++ +E ++ E E IE+VG +KLWIQL+IP IE G F VG+QEE +QEL R ED A+N ++ KY+ RAKL K+ ++ +V DY++++ E D E+++ K+A ++RN+Y + Y+LLSKN +K + K++ SHMT Sbjct: 86 ELIVPSHRQIVEELERIKDEASELIEMVGNIKLWIQLNIPRIEDGNNFGVGIQEEVIQELARVEDSAFNLFDAIVKYYMARAKLSTKVIKYPNVLDYQEAIRELDEKEWIHTKIAKVDMRNNYSMLYELLSKNWEKVVKPKSEDAHSHMT 235
BLAST of NO02G04070 vs. NCBI_GenBank
Match: XP_004342191.1 (proteasome activator protein [Acanthamoeba castellanii str. Neff] >ELR20081.1 proteasome activator protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 131.7 bits (330), Expect = 3.100e-27 Identity = 63/146 (43.15%), Postives = 96/146 (65.75%), Query Frame = 0 Query: 99 AVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDKLSTKNQSFGSHM 245 AVP NK + +V+ +++E I++ +VK+WIQLSIP IE+G F V +Q + + EL+R ED AY+ LE TKY+ TR KL +K+ +H + DY S++E D EYLN++++ +LRN+ + YDLLSKN D++ S + M Sbjct: 83 AVPVNKALARVVPAIKEEILAVIDIFNSVKIWIQLSIPRIEAGNTFGVDIQTDTISELSRAEDAAYSLLEGITKYYVTRGKLISKVLKHPEIEDYSLSVVELDEKEYLNMRLSTLDLRNNMAIIYDLLSKNWDRIQKPTSSHHTTM 228
BLAST of NO02G04070 vs. NCBI_GenBank
Match: SBS83626.1 (subunit of proteaseome activator complex, putative [Plasmodium malariae] >SBT87732.1 subunit of proteaseome activator complex, putative [Plasmodium malariae]) HSP 1 Score: 130.2 bits (326), Expect = 8.900e-27 Identity = 62/153 (40.52%), Postives = 102/153 (66.67%), Query Frame = 0 Query: 94 YTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 YTH VP +K I + +E ++ E IE++G +KLWIQL++P IE G F VG+QEE +QEL R E+ A+N ++ KY+ RAKL K+ ++ +++DY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + KN+ MT Sbjct: 129 YTH--YVPSHKQIYEELEKIKSYASELIEIIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKLSTKVIKYPNIYDYQEAIRELDEKEWIHIKITIIDMRNNYIMLYDLLFKNWEKVVKPKNEDAHHRMT 279
BLAST of NO02G04070 vs. NCBI_GenBank
Match: SBT70853.1 (subunit of proteaseome activator complex, putative [Plasmodium malariae]) HSP 1 Score: 130.2 bits (326), Expect = 8.900e-27 Identity = 62/153 (40.52%), Postives = 102/153 (66.67%), Query Frame = 0 Query: 94 YTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 YTH VP +K I + +E ++ E IE++G +KLWIQL++P IE G F VG+QEE +QEL R E+ A+N ++ KY+ RAKL K+ ++ +++DY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + KN+ MT Sbjct: 129 YTH--YVPSHKQIYEELEKIKSYASELIEIIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKLSTKVIKYPNIYDYQEAIRELDEKEWIHIKITIIDMRNNYIMLYDLLFKNWEKVVKPKNEDAHHRMT 279
BLAST of NO02G04070 vs. NCBI_GenBank
Match: CRG99287.1 (subunit of proteaseome activator complex, putative [Plasmodium relictum]) HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26 Identity = 63/153 (41.18%), Postives = 101/153 (66.01%), Query Frame = 0 Query: 94 YTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 YTH VP +K I +E ++ E IE++G +KLWIQL++P IE G F VG+QEE +QEL R E+ A+N ++ KY+ RAKL K+ ++ +V+DY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + KN+ MT Sbjct: 125 YTH--YVPSHKQIYSELEKIKAYASELIEIIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKLSTKVIKYPNVYDYQEAIRELDEKEWIHIKITIIDMRNNYIMLYDLLYKNWEKVVKPKNEDAHHRMT 275
BLAST of NO02G04070 vs. NCBI_GenBank
Match: EUD73956.1 (proteasome activator subunit 2 (PA28 beta) [Plasmodium vinckei petteri]) HSP 1 Score: 129.0 bits (323), Expect = 2.000e-26 Identity = 64/171 (37.43%), Postives = 108/171 (63.16%), Query Frame = 0 Query: 76 SEDEMGHLNGRHVHAHWDYTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 +ED +N + V+ H+ VP +K I +E ++ E IE++G +KLWIQL++P IE G F VG+QEE +QEL R E+ A+N ++ KY+ RAK+ K+ ++ +V DY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + KN+ + MT Sbjct: 107 NEDSKITVNDQLVYTHY-------VPSHKQIYNELEKIKSYASELIEMIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKISTKVIKYPNVVDYQEAIREIDEKEWIHIKITIIDMRNNYIMLYDLLCKNWEKVVKPKNEDAHNRMT 270
BLAST of NO02G04070 vs. NCBI_GenBank
Match: XP_724370.1 (proteasome activator pa28 subunit beta [Plasmodium yoelii] >EAA15935.1 Proteasome activator pa28 beta subunit, putative [Plasmodium yoelii yoelii] >ETB60399.1 hypothetical protein YYC_02687 [Plasmodium yoelii 17X] >CDU17483.1 subunit of proteaseome activator complex, putative [Plasmodium yoelii] >CDZ11750.1 subunit of proteaseome activator complex, putative [Plasmodium yoelii]) HSP 1 Score: 129.0 bits (323), Expect = 2.000e-26 Identity = 62/153 (40.52%), Postives = 101/153 (66.01%), Query Frame = 0 Query: 94 YTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 YTH VP +K I +E ++ E IE++G +KLWIQL++P IE G F VG+QEE +QEL R E+ A+N ++ KY+ RAK+ K+ ++ +V DY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + KN+ + MT Sbjct: 127 YTH--YVPSHKQIYDELEKIKSYASELIEIIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKISTKVIKYPNVLDYQEAIREIDEKEWIHIKITIIDMRNNYIMLYDLLCKNWEKVVKPKNEDAHNRMT 277
BLAST of NO02G04070 vs. NCBI_GenBank
Match: CRG96624.1 (subunit of proteaseome activator complex, putative [Plasmodium gallinaceum]) HSP 1 Score: 129.0 bits (323), Expect = 2.000e-26 Identity = 63/153 (41.18%), Postives = 101/153 (66.01%), Query Frame = 0 Query: 94 YTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 YTH VP +K I +E ++ E IE++G +KLWIQL++P IE G F VG+QEE +QEL R E+ A+N ++ KY+ RAKL K+ ++ +V+DY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + KN+ MT Sbjct: 125 YTH--YVPSHKQIYAELEKIKAYASELIEVIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKLSTKVIKYPNVYDYQEAIRELDEKEWIHIKITIIDMRNNYIMLYDLLYKNWEKVVKPKNEDAHHRMT 275
BLAST of NO02G04070 vs. NCBI_GenBank
Match: XP_008623784.1 (proteasome activator subunit 2 (PA28 beta) [Plasmodium vinckei vinckei] >KEG02963.1 proteasome activator subunit 2 (PA28 beta) [Plasmodium vinckei vinckei]) HSP 1 Score: 128.6 bits (322), Expect = 2.600e-26 Identity = 64/171 (37.43%), Postives = 108/171 (63.16%), Query Frame = 0 Query: 76 SEDEMGHLNGRHVHAHWDYTHDFAVPCNKTIIKVIELLRKEWKEAIELVGAVKLWIQLSIPPIESGGQFHVGVQEECVQELNRFEDVAYNYLESPTKYFQTRAKLGAKLSRHRSVFDYRQSLLEADSLEYLNLKMAATELRNSYLVAYDLLSKNEDK-LSTKNQSFGSHMT 246 +ED +N + V+ H+ VP +K I +E ++ E IE++G +KLWIQL++P IE G F VG+QEE +QEL R E+ A+N ++ KY+ RAK+ K+ ++ +V DY++++ E D E++++K+ ++RN+Y++ YDLL KN +K + KN+ + MT Sbjct: 108 NEDSKIIVNDQLVYTHY-------VPSHKQIYNELEKIKSYASELIEMIGNIKLWIQLNVPRIEDGNNFGVGIQEEAIQELARVEESAFNLYDAIVKYYMERAKISTKVIKYPNVVDYQEAIREIDEKEWIHIKITIIDMRNNYIMLYDLLCKNWEKVVKPKNEDAHNRMT 271 The following BLAST results are available for this feature:
BLAST of NO02G04070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04070 ID=NO02G04070|Name=NO02G04070|organism=Nannochloropsis oceanica|type=gene|length=2168bpback to top protein sequence of NO02G04070.1 >NO02G04070.1-protein ID=NO02G04070.1-protein|Name=NO02G04070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top protein sequence of NO02G04070.2 >NO02G04070.2-protein ID=NO02G04070.2-protein|Name=NO02G04070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=263bpback to top protein sequence of NO02G04070.3 >NO02G04070.3-protein ID=NO02G04070.3-protein|Name=NO02G04070.3|organism=Nannochloropsis oceanica|type=polypeptide|length=247bpback to top Synonyms
Publications
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